Ggra6555.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6555.t1
Unique NameGgra6555.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length145
Homology
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A2V3IIS8 (30S ribosomal protein S7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIS8_9FLOR)

HSP 1 Score: 240 bits (613), Expect = 1.150e-79
Identity = 118/142 (83.10%), Postives = 132/142 (92.96%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHF 142
            MSLHLSDPIVHKLVR+IMK GKKHAAL+IVDDAFHILR++ NV SP++L HRAVANAAPVVETR YKA GR + VP+PCGP RSQSLAMRFIRDAFRERKE+GGGLKLANEL AL+KR+GGA++RREE+HKRAEANRAFAHF
Sbjct:    1 MSLHLSDPIVHKLVRMIMKHGKKHAALKIVDDAFHILRSKHNVGSPIALFHRAVANAAPVVETRGYKASGRTVHVPLPCGPKRSQSLAMRFIRDAFRERKENGGGLKLANELFALEKRQGGAYSRREEMHKRAEANRAFAHF 142          
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A1X6P3Z7 (Ribosomal_S7 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z7_PORUM)

HSP 1 Score: 139 bits (349), Expect = 1.770e-39
Identity = 66/144 (45.83%), Postives = 102/144 (70.83%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHFMK 144
            MSL + DP++ ++  + M+ G+K  ++ ++++A   LR +  V  PV  +  AV NA P+VET ++KAGGRA+Q+P+PC P R++SLA+R +RD+FR RKEHG GL+LA EL  L K+ G    RR+++H+ AEAN+A+ +F K
Sbjct:    1 MSLLMRDPMMARMACMFMRHGEKTKSMALIEEAVVELRRRHGVERPVEFIRSAVENAKPLVETVKWKAGGRAIQMPVPCRPARAESLALRMLRDSFRLRKEHGAGLRLAAELVDLSKKTGRTRGRRDDMHRAAEANKAYVYFRK 144          
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A7S0T3W4 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T3W4_9RHOD)

HSP 1 Score: 137 bits (344), Expect = 1.460e-38
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAF 139
            MS H  D +V ++VR+ M+ GKK  + +I+D A  IL+   N+  P+ +L+ AV NA P+VETR     GR + +P P  P R +SLA+RFIRDA RER E+G  L+LANE+  L K++GGA  RR+  H+ AEANRAF
Sbjct:   17 MSFHARDAMVSRMVRIFMRHGKKTTSQKIIDGAMGILKRDHNIQDPLKMLYEAVQNAKPLVETRPVINAGRKVLIPRPVSPERQESLALRFIRDAMRERNENGSPLRLANEILELHKKQGGARRRRDNQHRTAEANRAF 155          
BLAST of Ggra6555.t1 vs. uniprot
Match: M1VCX2 (Mitochondrial ribosomal protein S7 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VCX2_CYAM1)

HSP 1 Score: 136 bits (342), Expect = 1.980e-38
Identity = 71/142 (50.00%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFR-ERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAH 141
            MSL+ +D ++ KLV ++M+DGKK  A RIVD+AF IL+ +  V  P S    A+  A PVVE  RY+  GR LQVP P  PHR+ +LA+R IRDA R ER+E G   +LA EL  + +++G A+ RR++LHK AEAN+ F H
Sbjct:    1 MSLYTADSVLSKLVNILMRDGKKSTAQRIVDEAFWILKREYQVPDPASYAKEAIEQAKPVVELTRYRLSGRNLQVPSPLMPHRATALALRAIRDAVRSERRERGAAARLAAELVDIHRQQGVAWKRRQDLHKMAEANKMFTH 142          
BLAST of Ggra6555.t1 vs. uniprot
Match: M2XY53 (30S ribosomal protein S7 (Plastid) isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY53_GALSU)

HSP 1 Score: 127 bits (318), Expect = 9.160e-35
Identity = 64/141 (45.39%), Postives = 94/141 (66.67%), Query Frame = 0
Query:    2 SLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHF 142
            SL+ SD ++ K+V + M+DG+K  +L+++D+AF  L+ +  V  P+SL+HRAV  A P+V    +   G+ + VPIP  P +    A+RFI+ A  +RKEH G ++LANEL  L K  GGA  RR++LH+ AE NRA+AHF
Sbjct:    3 SLYKSDVVIGKMVNIFMRDGEKGVSLKLIDEAFRELKVKHGVKDPLSLVHRAVDIAKPLVALIPHYPHGKKVAVPIPLKPEQQLGKALRFIKQAVADRKEHYGHVRLANELLELSKGAGGAKKRRDDLHRLAEQNRAYAHF 143          
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A7S0ZCK2 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCK2_9RHOD)

HSP 1 Score: 123 bits (309), Expect = 1.830e-33
Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANR 137
            MS    DP++ +LVR++M DGKK  +++IVD A  IL+ +  +  PV  ++ AV  A P++E       GR + VP P  P R + LA+R+IRDA R RKEHG  L+LANEL  L  ++GGA  +R++ H+ AE+NR
Sbjct:    1 MSFLQKDPLISRLVRILMWDGKKITSMKIVDGALMILKREHKIQDPVQFVYHAVEQAKPLIENFSMVVAGRRVPVPRPVYPKRQEGLALRYIRDAMRARKEHGSALRLANELLDLSNKQGGARKKRDDQHRIAESNR 137          
BLAST of Ggra6555.t1 vs. uniprot
Match: H5SGQ8 (30S ribosomal protein S7 n=5 Tax=Bacteria TaxID=2 RepID=H5SGQ8_9BACT)

HSP 1 Score: 117 bits (292), Expect = 1.020e-30
Identity = 64/136 (47.06%), Postives = 87/136 (63.97%), Query Frame = 0
Query:    7 DPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHF 142
            D +V K + VIM+DGKK  A RIV +AF I+R ++    P+   H+A+ N APVVE R  + GG   Q+P+     R  +LAMR+I+   RER++    LKLA EL A    EGGA  +R+E+H+ AEANRAFAH+
Sbjct:   19 DVMVAKFINVIMRDGKKSIARRIVYEAFDIIR-ERTKKDPLETFHKAITNVAPVVEVRSRRIGGANYQIPMEVREDRRIALAMRWIKQYARERRDKSMALKLAAELIAAANGEGGAIRKRDEVHRMAEANRAFAHY 153          
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A3L7QPK4 (30S ribosomal protein S7 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7QPK4_9BACT)

HSP 1 Score: 113 bits (282), Expect = 3.510e-29
Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = 0
Query:    9 IVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHF 142
            +V K V  +M+DGKK AA+R+  DA  I++ +   +SP+ +   AV N  P +E R  + GG   QVP P G  R ++LA+R+I +A R RK  G  + L++E  A  KREG A  +RE +HK A+AN+AFAHF
Sbjct:   22 LVSKFVNCMMRDGKKSAAIRVFYDAMDIIQKKLPDASPLEVFQIAVDNVKPAIEVRSKRVGGATYQVPTPVGSRRQRALAIRWILEACRSRKGRGIAVSLSDEFMAAYKREGAAMTKRENVHKMADANKAFAHF 155          
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A2H0KBP0 (30S ribosomal protein S7 n=1 Tax=Candidatus Taylorbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_46_11 TaxID=1975025 RepID=A0A2H0KBP0_9BACT)

HSP 1 Score: 112 bits (280), Expect = 6.830e-29
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    6 SDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHF 142
            + P V KL+   M+DGKK AA +IV  AF +++ Q+   +P+ +   A+ N  P++E R  + GG   QVP+   P R  SLA R++ DA R++K     +KLA EL    K EG A  +RE +HK AEAN+AFAHF
Sbjct:   18 NSPKVTKLINYCMEDGKKEAARKIVFGAFDVIKKQEKTENPLEVFDNALKNITPLMEVRSRRVGGANYQVPVEVRPERRTSLAFRWVIDAARKKKGRPMHVKLAEELILASKNEGDAVKKRENVHKMAEANKAFAHF 154          
BLAST of Ggra6555.t1 vs. uniprot
Match: A0A7S2ZRL3 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRL3_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 7.950e-29
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    7 DPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLLHRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERKEHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHFM 143
            DP+V K ++ I     + AA +++ +AF IL+T+  V+ PV  L R + N +P V T+R    GR+L +P+PC  ++ +     F+R+ FRER++     +L  EL AL K EG +   R+ LH+ AE+NRAF HF+
Sbjct:    6 DPVVLKFIKKISVHNDEVAARKVIQEAFFILKTKYGVADPVDCLRRGIKNCSPAVLTKRRVVAGRSLNIPVPCDENQGRKKGFIFLREGFRERRDSTAAERLCKELMALQKMEGNSINMRDNLHRMAESNRAFVHFL 142          
The following BLAST results are available for this feature:
BLAST of Ggra6555.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIS81.150e-7983.1030S ribosomal protein S7 n=1 Tax=Gracilariopsis ch... [more]
A0A1X6P3Z71.770e-3945.83Ribosomal_S7 domain-containing protein n=1 Tax=Por... [more]
A0A7S0T3W41.460e-3848.92Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
M1VCX21.980e-3850.00Mitochondrial ribosomal protein S7 n=1 Tax=Cyanidi... [more]
M2XY539.160e-3545.3930S ribosomal protein S7 (Plastid) isoform 1 n=1 T... [more]
A0A7S0ZCK21.830e-3344.53Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
H5SGQ81.020e-3047.0630S ribosomal protein S7 n=5 Tax=Bacteria TaxID=2 ... [more]
A0A3L7QPK43.510e-2944.0330S ribosomal protein S7 n=1 Tax=Planctomycetes ba... [more]
A0A2H0KBP06.830e-2943.0730S ribosomal protein S7 n=1 Tax=Candidatus Taylor... [more]
A0A7S2ZRL37.950e-2938.69Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..144
e-value: 2.3E-40
score: 136.6
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 5..142
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 2..143
e-value: 4.2E-42
score: 145.3
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 5..140
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 6..137
e-value: 2.8E-39
score: 134.2
NoneNo IPR availablePANTHERPTHR11205:SF1928S RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 5..142
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 7..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:258897..259397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6555.t1Ggra6555.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 258897..259397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6555.t1 ID=Ggra6555.t1|Name=Ggra6555.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=145bp
MSLHLSDPIVHKLVRVIMKDGKKHAALRIVDDAFHILRTQQNVSSPVSLL
HRAVANAAPVVETRRYKAGGRALQVPIPCGPHRSQSLAMRFIRDAFRERK
EHGGGLKLANELAALDKREGGAFARREELHKRAEANRAFAHFMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR036823Ribosomal_S7_dom_sf
IPR023798Ribosomal_S7_dom
IPR020606Ribosomal_S7_CS