Ggra6576.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6576.t1
Unique NameGgra6576.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length576
Homology
BLAST of Ggra6576.t1 vs. uniprot
Match: A0A2V3IK38 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK38_9FLOR)

HSP 1 Score: 506 bits (1304), Expect = 1.240e-169
Identity = 331/619 (53.47%), Postives = 395/619 (63.81%), Query Frame = 0
Query:    2 LDQELNTKDSEHLTEAALERQGIEDARESRGNERKQGD-----DDLADVDAQIQEIAKRVGITEEELKQADVIQPGAKNLH--VNDPN----------DMDHHDLLE-------QQRAKVDT--DRKVILDAVGKADQVQPPPED-----------------DARHPAQAPPEMVAPGQPVL-RKLQKPQRMMEPDMPQGVNNGKSDNSELVEELEMYKQRLHDVLKSEKTAREGEREARLETDRVRKELTSVNTEMEKAEKLVSERNSDLERLRDSLPEIAKEAKDEERGEMEEMRETIEEQKRAFDELFEEKQMLSRMLSDEQLKLDELQEKIQHPDLGLWISQRAERAAILVEGPETDAIKYYANKYMAPKVTKMKHRLQMLENRVERTVDHLLPSKYGSVVAMLLSIALIGFPIFVTLSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLCVTGFLLRQDPLQTLYEANSGMFVLLQLGIGVAYPLFLAIILLTVLRCRDRLDLFVFACELLFYAVIGMNYRARVWRPAMLGENIDCGPMMYAVYTMDFLAMTALTVASARPTQLSGFGTSDVEKGRVEED-GDGSGRVSSGSKGIGSLGSGLMQLAVGGRRDEKAE 575
            LD++ +TK ++ LTE A   QG+E A       R  GD      D A+VDAQI  IA+  GITEEEL + DV Q   + L   V D N          D D  D LE       Q  A+ D   D      A+ K         D                 DAR   QAPPEMVAPG+P     LQ      E       N+   D S L  E E Y+QR+  + + E+ AR  EREA+               E   A+  VSE+  +  +LR+S  +   EAK E++ EMEEM+  I        ELFEEKQ+LSRMLSDEQ KL+ELQEKIQHPDLGLW+ QRAERAAILVEGPETDA+KYYA KYMAPKVTKMKHRLQMLENRVER+VDHLLP+KYG  VAMLLSI LIGFP+FVTLST VSLTK  SLRQ+VL+GNVF TAFAVGLCV G +LRQDPLQTLYEA+  +F+LLQLG+ VAYP FL +I   VLR RD++D+ VF CEL+FYAVIGMNYR+RVWR AMLGE+ID GPMMYAVY +DF+AM ALTV+S+R    SG G  DVE G  +     G+GR ++ ++GI SLGSGL+QLAVGG+R++K E
Sbjct:   77 LDKDQDTKGTDTLTEGAFSAQGVEHADGIPKPNRDDGDAAAEAKDDAEVDAQIAAIARHAGITEEELNRVDVNQDTGRKLEDMVKDVNEASASSIYARDHDATDNLERSNRNAEQASARDDAAQDDGAARKAISKTSNADATNMDVGVGAKDRDGDAEASVKDARQADQAPPEMVAPGRPNQPHVLQAKNETKE-------NSAGMDVSSLRTENENYRQRIKSLAEREQNARHNEREAKXXXXXXXXXXXXXXXEKTHADHFVSEQKLENRKLRESFSKSVDEAKVEKQEEMEEMKAAIXXXXXXXXELFEEKQLLSRMLSDEQRKLNELQEKIQHPDLGLWVRQRAERAAILVEGPETDAVKYYAQKYMAPKVTKMKHRLQMLENRVERSVDHLLPAKYGGFVAMLLSIGLIGFPVFVTLSTAVSLTKSFSLRQHVLVGNVFWTAFAVGLCVAGLVLRQDPLQTLYEASRSLFILLQLGMAVAYPAFLMVISCAVLRARDKVDVLVFGCELVFYAVIGMNYRSRVWRAAMLGEHIDTGPMMYAVYMVDFVAMMALTVSSSRTMGGSGMGGHDVEDGFEKLSVHSGAGRGAASARGIVSLGSGLVQLAVGGKREQKDE 688          
BLAST of Ggra6576.t1 vs. uniprot
Match: R7QQZ2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ2_CHOCR)

HSP 1 Score: 388 bits (997), Expect = 3.020e-125
Identity = 205/322 (63.66%), Postives = 254/322 (78.88%), Query Frame = 0
Query:  257 IEEQKRAFDELFEEKQMLSRMLSDEQLKLDELQEKIQHPDLGLWISQRAERAAILVEGPETDAIKYYANKYMAPKVTKMKHRLQMLENRVERTVDHLLPSKYGSVVAMLLSIALIGFPIFVTLSTVVSLTKGVSLRQYVLLGNVFLTAFAVGLCVTGFLLRQDPLQTLYEANSGMFVLLQLGIGVAYPLFLAIILLTVLRCRDRLDLFVFACELLFYAVIGMNYRARVWRPAMLGENIDCGPMMYAVYTMDFLAMTALTVASARPTQ-----LSGFGTSDVEK-----GRVEEDGDGSGRVSSGSKGIGSLGSGLMQLAVGG 568
            IEE+KRAFDEL+EEKQ+L ++L +EQ  L +LQEKIQHPDLGLWI QRAERAAILVE PETDA+K+YA KYMAPKVTKM+HRL +LE RVE++VDHLLPS+YGSVVA++L I LIGFP+FVT+STVV++TK VSLRQYVLLGNVFLTAF+ GLC+ G LL+QDPLQTLYEA+  MFV+LQL   V +P+F+ +I   VL+ RD+ DLFVF CEL+FY ++G+NYRARVWRPAMLG NI+   MMY VY +DFL+MTALT++SA+  Q       G    DVE+         ++  G+G  SS    +G+LGSGLM+ A+ G
Sbjct:  233 IEERKRAFDELYEEKQVLGQILDEEQKTLHDLQEKIQHPDLGLWIRQRAERAAILVETPETDAMKFYARKYMAPKVTKMRHRLALLEKRVEKSVDHLLPSQYGSVVALMLCIGLIGFPVFVTMSTVVTVTKSVSLRQYVLLGNVFLTAFSSGLCIAGILLQQDPLQTLYEASESMFVILQLAAAVVFPVFIGVIFCAVLKARDQEDLFVFGCELVFYILVGLNYRARVWRPAMLGRNIETSRMMYVVYVIDFLSMTALTISSAKVGQSRLPSFVGDSYVDVERDLSAGANKSDEAGGAGPRSS----LGALGSGLMKAAISG 550          
The following BLAST results are available for this feature:
BLAST of Ggra6576.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IK381.240e-16953.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQZ23.020e-12563.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..291
NoneNo IPR availableCOILSCoilCoilcoord: 200..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 535..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 383..393
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 481..499
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 455..460
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 394..416
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 417..430
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 431..454
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 500..519
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 461..480
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 520..575
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 358..382
NoneNo IPR availableTMHMMTMhelixcoord: 361..383
NoneNo IPR availableTMHMMTMhelixcoord: 500..519
NoneNo IPR availableTMHMMTMhelixcoord: 395..417
NoneNo IPR availableTMHMMTMhelixcoord: 432..454
NoneNo IPR availableTMHMMTMhelixcoord: 463..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:313145..314872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6576.t1Ggra6576.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 313145..314872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6576.t1 ID=Ggra6576.t1|Name=Ggra6576.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=576bp
MLDQELNTKDSEHLTEAALERQGIEDARESRGNERKQGDDDLADVDAQIQ
EIAKRVGITEEELKQADVIQPGAKNLHVNDPNDMDHHDLLEQQRAKVDTD
RKVILDAVGKADQVQPPPEDDARHPAQAPPEMVAPGQPVLRKLQKPQRMM
EPDMPQGVNNGKSDNSELVEELEMYKQRLHDVLKSEKTAREGEREARLET
DRVRKELTSVNTEMEKAEKLVSERNSDLERLRDSLPEIAKEAKDEERGEM
EEMRETIEEQKRAFDELFEEKQMLSRMLSDEQLKLDELQEKIQHPDLGLW
ISQRAERAAILVEGPETDAIKYYANKYMAPKVTKMKHRLQMLENRVERTV
DHLLPSKYGSVVAMLLSIALIGFPIFVTLSTVVSLTKGVSLRQYVLLGNV
FLTAFAVGLCVTGFLLRQDPLQTLYEANSGMFVLLQLGIGVAYPLFLAII
LLTVLRCRDRLDLFVFACELLFYAVIGMNYRARVWRPAMLGENIDCGPMM
YAVYTMDFLAMTALTVASARPTQLSGFGTSDVEKGRVEEDGDGSGRVSSG
SKGIGSLGSGLMQLAVGGRRDEKAE*
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