Ggra2864.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2864.t1
Unique NameGgra2864.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length272
Homology
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A2V3ISG6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISG6_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 1.910e-96
Identity = 157/228 (68.86%), Postives = 180/228 (78.95%), Query Frame = 0
Query:   43 KLVAAFLFLAISLISGSAAAAAGVLNTDTLVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGLVATIAALASIGNIAREAIENVDEEEI 270
            K V     L I L S   AAA G +  D  V IA+WFERLGP A YLY +LYF+LELVAVPA+PLTLGSGYLFG+L GTI VS+AST AATASFLIARY  R +I+RLA    RFR++DRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSV + +Y++GSWLGMLPGT+AYVSAGA VN LTDL   +S +SP L++ G+VA IA LAS+G IA EAIEN DE E+
Sbjct:   56 KSVVTLSLLLIFLASSGVAAATGFIRPDAFVHIAQWFERLGPQAAYLYGLLYFVLELVAVPAIPLTLGSGYLFGMLRGTITVSVASTLAATASFLIARYGLRDNITRLAERYPRFRLLDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVNILEYVLGSWLGMLPGTLAYVSAGATVNNLTDLSSNRSNISPVLLLIGVVAAIAVLASVGKIASEAIENSDEGEL 283          
BLAST of Ggra2864.t1 vs. uniprot
Match: R7QL49 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL49_CHOCR)

HSP 1 Score: 284 bits (726), Expect = 3.290e-90
Identity = 152/227 (66.96%), Postives = 182/227 (80.18%), Query Frame = 0
Query:   43 KLVAAFLFLAISLISGSAAAAAGVLNTDTLVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGLVATIAALASIGNIAREAIENVDEEE 269
            +L+AA +    +L  G  AA +GVL+ D LV ++ WFE LGP+A++LYS LYFLLELV VPALPLTLGSGYLFG++ GTIAVS AST A+ A+FLIARY  R S+S+LA+   RFR +DRAIGREGFKFVLLLRLSPLLPF+ISNYLYGLTSV L  Y+ GSWLGMLPGTIAYVSAGAAVNTLTDL  G + ++PGLV  GL AT+ AL ++G +A  AIE+ +EEE
Sbjct:  237 RLIAAAVTFLAALAVGGVAAVSGVLSPDRLVALSEWFETLGPSAVFLYSGLYFLLELVGVPALPLTLGSGYLFGVVKGTIAVSAASTAASAAAFLIARYGLRDSVSKLASRYPRFRAMDRAIGREGFKFVLLLRLSPLLPFSISNYLYGLTSVNLAPYVAGSWLGMLPGTIAYVSAGAAVNTLTDLSVGGADINPGLVALGLAATVGALWTVGKMATRAIESEEEEE 463          
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A1X6P385 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P385_PORUM)

HSP 1 Score: 219 bits (557), Expect = 5.000e-64
Identity = 119/228 (52.19%), Postives = 160/228 (70.18%), Query Frame = 0
Query:   35 RSATGTNSKLVAAFLFLAISLISGSAAAAAGVLNTDTLVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGLVATIAALASIGNIAREAI 262
            +S  G + +++A      ++++  + A+ +  ++ DTL Q+  W + LGP    +Y + YF LELVAVPALPLT+G+GYLFG+  G+  VS+A+T AA ASFL+ARY  R  I  LA    +FR +DRA+GREGFKFVLLLRLSPLLPFA+SNYLYGLTSVK   Y++GSWLGMLPG++A VS GAAVN L+DL      V+P L+  G +AT+  L S+G +A  A+
Sbjct:  303 KSIAGVDVRVLAGITVALVTVVLVAGASVSRHVSPDTLGQLVDWLQGLGPLGPVVYGLAYFALELVAVPALPLTVGAGYLFGVTRGSAVVSVAATSAAAASFLLARYGARDFIQGLARRYPKFRAVDRAVGREGFKFVLLLRLSPLLPFALSNYLYGLTSVKFAPYVLGSWLGMLPGSVAIVSGGAAVNALSDLSSRPD-VNPALLGLGFIATLLVLRSVGKLASVAL 529          
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A7J7IM87 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM87_9RHOD)

HSP 1 Score: 196 bits (497), Expect = 3.390e-56
Identity = 108/216 (50.00%), Postives = 143/216 (66.20%), Query Frame = 0
Query:   67 LNTDTLVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASIS-RLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTL-------------TDLHEGQSAVSPGLVITGLVATIAALASIGNIAREAIENVDEE 268
            L+ D L  + +WFE +GP A++ Y  LY+LLELV+ PAL LT+G+GYLFG+  G +  S A+T AA  SFL++RY  R  I  +LA+   RFRVIDRA+ +EGFK VLLLRLSPLLPF+ SNYLYG+TSV+   Y++ SWLGMLPGT+AYV AG   N +             T+L    S V+  L++ GL AT+A L  IG    +A++ +D E
Sbjct:  194 LSIDNLHDLVKWFESVGPMAVFYYGGLYYLLELVSFPALMLTIGAGYLFGVWRGLVVSSAAATAAAGTSFLLSRYFLRNFIQEKLASKFPRFRVIDRAVAKEGFKIVLLLRLSPLLPFSASNYLYGITSVRFVPYMLASWLGMLPGTLAYVYAGHTGNAVLESVASRVIEGAATELTSEGSGVNTALLVVGLAATVAVLLLIGRTTSQALKEMDRE 409          
BLAST of Ggra2864.t1 vs. uniprot
Match: M1UV71 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UV71_CYAM1)

HSP 1 Score: 193 bits (491), Expect = 2.620e-55
Identity = 110/218 (50.46%), Postives = 142/218 (65.14%), Query Frame = 0
Query:   65 GVLNTDTLVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASIS-RLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSA-------------VSPGLVITGLVATIAALASIGNIAREAIENVDEE 268
            G L+ + L  + +WFE +GP A+  Y  LYF+LELV+ PAL LT+G+GYLFG+  G +  S A+T AA  SFL++RY  R  I  +LA+   RFR IDRAI +EGFK VLLLRLSPLLPF+ SNYLYGLTSV+   YI+ SWLGMLPGT+AYV AG   N + +    ++A             V+  L+I GL AT   L  IG   R+A++ +DEE
Sbjct:  192 GTLSIENLHDLVKWFESMGPAAVLYYFGLYFVLELVSFPALLLTIGAGYLFGVWRGLLVSSAAATAAAGTSFLLSRYFLRNLIQEKLASRFPRFRAIDRAIAKEGFKIVLLLRLSPLLPFSASNYLYGLTSVRFVPYIVASWLGMLPGTLAYVYAGRTGNAVLERVASRAASDAGEELAASGTGVNTALLIVGLAATAGVLVLIGRTTRQALKEMDEE 409          
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A087SHE6 (TVP38/TMEM64 family membrane protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SHE6_AUXPR)

HSP 1 Score: 182 bits (462), Expect = 3.010e-53
Identity = 108/227 (47.58%), Postives = 144/227 (63.44%), Query Frame = 0
Query:   47 AFLFLAISLISGSAAAAAGVLNTDTLVQIARWF----ERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGLVATIAALASIGNIAREAIENVDEEE 269
            A +  A+ L+S    A AG    D +     WF    + +GP    +Y   Y LLELVAVPA+PLT+ +G LFGL  G   VS+A++ A+T +FLIARY+ R  +S +A+ N +F  IDRAIG++  + V LLRLSPLLPF+ SNYLYGLTSV +  Y++GSW+GMLPGT AYVS GA    L   H     V+P  V  GL AT A +  +G +A +A+ +V+EEE
Sbjct:   23 AAILAAVGLVS---VAGAGFYFKDQIWVSLEWFTGVIDAMGPEGYLVYVAAYALLELVAVPAIPLTVAAGALFGLWPGVATVSLAASIASTTAFLIARYLARDRVSAMASKNKQFAAIDRAIGKDSLRVVTLLRLSPLLPFSASNYLYGLTSVDVGSYMLGSWIGMLPGTFAYVSVGAYGKDLASGHG----VAPWQVALGLGATAATIWYVGGLASKALADVEEEE 242          
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A328D7V5 (Uncharacterized protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328D7V5_9ASTE)

HSP 1 Score: 183 bits (465), Expect = 1.040e-52
Identity = 103/204 (50.49%), Postives = 137/204 (67.16%), Query Frame = 0
Query:   69 TDTLVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTD------LHEGQSAVSPGLVITGLVATIAALASIGNIAREAIENVD 266
            +D L Q+  + E  GP    L+ V+Y  LE++A+PA+PLTL +G LFG L GTI VSI+ T AA+ +FLIARY  R SI +L  GNT+F  IDRAIG  GFK V LLRLSPLLPF++ NYLYGLTSV+   Y++GSWLGMLPGT AYVSAGA    +        L  G   ++ G    GL+ T+ A A +  +A++A+++++
Sbjct:  132 SDLLNQLTVFIEGHGPAGYALFVVVYAALEILAIPAIPLTLTAGLLFGSLTGTIIVSISGTMAASVAFLIARYFARDSILKLVEGNTKFLAIDRAIGENGFKIVTLLRLSPLLPFSLGNYLYGLTSVEFVPYVLGSWLGMLPGTWAYVSAGALGRAIIQDGSVSALGGGNGVLTLGF---GLLFTVVAAAYVTRLAKDAMKDIE 332          
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A5J4Y586 (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y586_9CHLO)

HSP 1 Score: 182 bits (462), Expect = 2.620e-52
Identity = 100/190 (52.63%), Postives = 130/190 (68.42%), Query Frame = 0
Query:   80 ERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGLVATIAALASIGNIAREAIENVDEEE 269
            +  GP     Y VLY LLE+VA+PA+PLT+ +G LFG++ GTI VS A+T AAT +FLIARY  R  + +LA  N +++ IDRAIG+E FK V LLRLSPLLP A+SNY YG+TSV L  Y+ GSWLGMLPGTIAYV AG     L D       V    V  GL  T+ A+  IG +A++A+++V++E+
Sbjct:  133 DEWGPWGYVAYGVLYTLLEIVALPAIPLTMTAGVLFGIVPGTILVSGAATAAATIAFLIARYAARDKVLQLAQDNPKYKAIDRAIGKESFKVVTLLRLSPLLPLALSNYFYGITSVDLPSYVAGSWLGMLPGTIAYVYAGNYGRALIDGDGDVGGVKGWQVALGLGITVLAVGYIGKLAKKALDDVEQED 322          
BLAST of Ggra2864.t1 vs. uniprot
Match: C1E0I8 (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E0I8_MICCC)

HSP 1 Score: 180 bits (457), Expect = 3.120e-52
Identity = 103/230 (44.78%), Postives = 144/230 (62.61%), Query Frame = 0
Query:   45 VAAFLFLAISLISGSAAAAAGVLNTDTLVQIARWF----ERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGL--VITGLVATIAALASIGNIAREAIENVDEE 268
            ++A    A+ +I  +A    GV   D + +   WF    + +G      + +LY  LE++AVPA+PLT+ +G +FG   GT  VS+++T AATASFLIARY  R  +  +A+ N +F  IDRAIG + F+ V LLRLSPLLPFA+SNYLYGLTSVKL  Y+ GSWLGMLPGT AYVSAGA   T+ ++  G +     L  +  G   T+   A I  +A  A+++V+++
Sbjct:   39 ISAGALAALPMIGFAALIGLGVAYKDDITEFLNWFTGYVDSMGAAGPPAFMLLYLGLEILAVPAIPLTMAAGLIFGPAQGTAMVSVSATAAATASFLIARYALRDRVKAIADENPKFAAIDRAIGEDSFRVVCLLRLSPLLPFALSNYLYGLTSVKLWPYVAGSWLGMLPGTFAYVSAGAVGRTIAEVGGGSAGADSHLAQIAAGFGFTVLTGAYITRLASNALKDVEDD 268          
BLAST of Ggra2864.t1 vs. uniprot
Match: A0A0K9PHC7 (TVP38/TMEM64 family membrane protein ydjX n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PHC7_ZOSMR)

HSP 1 Score: 182 bits (461), Expect = 3.690e-52
Identity = 99/197 (50.25%), Postives = 132/197 (67.01%), Query Frame = 0
Query:   72 LVQIARWFERLGPNAIYLYSVLYFLLELVAVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRLANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDYIMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGL--VATIAALASIGNIAREAIENVD 266
            L+Q + + E  GP    L+  +Y  LE++A+PA+PLT+ +G LFG + GTI VSI+ T AATA+FLIARY  R  I +L  GN +F  ID+AIG  GFK V LLRLSPLLPF++ NYLYGLTSVK   Y  GSWLGMLPGT AYVSAGA    +     G S    GL+  G+  +AT  A   + ++A++A+++++
Sbjct:  132 LIQFSSFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSITGTILVSISGTIAATAAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFAPYAFGSWLGMLPGTWAYVSAGAFGRAIITEESGISLGGNGLITIGIGFLATALAATYVTSLAKDAMKDIE 328          
The following BLAST results are available for this feature:
BLAST of Ggra2864.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISG61.910e-9668.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QL493.290e-9066.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P3855.000e-6452.19Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IM873.390e-5650.00Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1UV712.620e-5550.46Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A087SHE63.010e-5347.58TVP38/TMEM64 family membrane protein n=2 Tax=Auxen... [more]
A0A328D7V51.040e-5250.49Uncharacterized protein n=2 Tax=Cuscuta sect. Clei... [more]
A0A5J4Y5862.620e-5252.63Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
C1E0I83.120e-5244.78Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A0K9PHC73.690e-5250.25TVP38/TMEM64 family membrane protein ydjX n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 102..220
e-value: 8.3E-24
score: 84.3
NoneNo IPR availablePANTHERPTHR46826FAMILY NOT NAMEDcoord: 27..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..190
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..233
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 120..142
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000077_piloncontigtig00000077_pilon:226198..227013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2864.t1Ggra2864.t1Gracilaria gracilis GNS1m malemRNAtig00000077_pilon 226198..227013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2864.t1 ID=Ggra2864.t1|Name=Ggra2864.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=272bp
MCQNRSYGTSDVVPTQSSSPTASTDVPATDSSVSRSATGTNSKLVAAFLF
LAISLISGSAAAAAGVLNTDTLVQIARWFERLGPNAIYLYSVLYFLLELV
AVPALPLTLGSGYLFGLLDGTIAVSIASTFAATASFLIARYVFRASISRL
ANGNTRFRVIDRAIGREGFKFVLLLRLSPLLPFAISNYLYGLTSVKLRDY
IMGSWLGMLPGTIAYVSAGAAVNTLTDLHEGQSAVSPGLVITGLVATIAA
LASIGNIAREAIENVDEEEIP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc