Ggra2869.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2869.t1
Unique NameGgra2869.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length910
Homology
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BLAST of Ggra2869.t1 vs. uniprot
Match: A0A7Y8I6H2 (Family 16 glycosylhydrolase n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y8I6H2_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 6.740e-8
Identity = 72/253 (28.46%), Postives = 116/253 (45.85%), Query Frame = 0 
Query:  461 VAIVFCE-TDHTCFVEGKRLITIEVVGKDYHKIEDIDVFQEVGAYRTKVVRVHNLNLGSRPDLTIRIIKSGTAAAMISGIIVAPSALSHLLMQSPPTPTAFVNCGVFGAINRYYDGGIGENVEFTPVGLYG--DGVPRMTGTKIL---RDICSVLRAGKYK---YTVTVDNPGKFDVFLIFAELYYNASDARVFNVEVGAKEIHEVKEIDVFAEVGKYRPFILQLTDIDV-DSTITIEGKSVKAMPMISGFLV 703
            V +VF E  D T   +  R     V   +    ED+         +T  + V  L + S  +L +  +K        SG     + LS L+M  P T    +NCG    ++   D      +EF+    YG  DG   +  + +     D  ++ +A +Y    Y V V N GK++V L+FAE YYN++ +RVF+V +       +K +DVFA+VGK    I ++T+I+V D  + I+   +     ISG ++
Sbjct:  270 VTVVFTEEVDQTMAEDETRYFISGVTINNAVLQEDL---------KTVELSVSGLTIPSTNNLIVLSMKDRAPVPNTSG-----AKLSTLIMPQPLTFPIKINCGGSADLDYLAD------IEFSKTTEYGFFDGTATVYPSTLSISGTDEDAIYQAERYNMVGYKVRVPN-GKYNVKLLFAEKYYNSAGSRVFDVYIEGSLA--IKNLDVFAQVGKNAACIKEITNINVTDEELDIQFADLVNSAFISGIII 499
The following BLAST results are available for this feature:
BLAST of Ggra2869.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7Y8I6H26.740e-828.46Family 16 glycosylhydrolase n=1 Tax=Ignavibacteria... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021720Malectin domainPFAMPF11721Malectincoord: 613..685
e-value: 1.9E-8
score: 34.6
coord: 262..350
e-value: 4.8E-9
score: 36.5
coord: 86..185
e-value: 3.0E-5
score: 24.2
NoneNo IPR availableGENE3D2.60.120.430coord: 213..368
e-value: 2.0E-12
score: 49.2
coord: 61..205
e-value: 2.8E-11
score: 45.5
coord: 603..706
e-value: 3.8E-11
score: 45.0
coord: 382..545
e-value: 2.7E-5
score: 26.0
IPR039155MalectinPANTHERPTHR13460UNCHARACTERIZEDcoord: 265..334
coord: 611..689
coord: 83..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000077_piloncontigtig00000077_pilon:268806..271535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2869.t1Ggra2869.t1Gracilaria gracilis GNS1m malemRNAtig00000077_pilon 268806..271535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2869.t1 ID=Ggra2869.t1|Name=Ggra2869.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=910bp
MPSLPFCESYQVRSFTEEGLSSLVPVPSPPQNFIPQVDPERPYYSQKPVA
YVNCAFADGLDAGVNPAIRLLTNAAAVKVANDLPYANVNNTELDDFVSSY
RWHARQLSYEVDVPNPGLYDVTLIFAETDVKFHAKSTHLMTVEVQAVETY
VKMDLNVFDEVGSNTPYILCFNAVEVQSDLTISVYSTHDDGYAKLNGFIV
TEFDEKRTNVLKSSNVVTVLDCGNARFDWDGPPPNVTVQAFENTDLGVNP
THVGCVNPLLAGLAMSTRMSAHPLGYDISVTEPGRYDVSLCFSELKLMAV
GKRKFDVHVGALDVFQKKSLDVYAEAGMYTPYVLTAKDLRVDDKISIRFT
DELFGPLVSGVVVSKAHNSDDMLLPMQSIAVDDSYVTCINCGPGLAIPAN
DPGMKNNVRCNGNSSHRVVNASIIGEDLLFMNMGKSCRWSNTDFEYDIVP
KHANDVGFWDVAIVFCETDHTCFVEGKRLITIEVVGKDYHKIEDIDVFQE
VGAYRTKVVRVHNLNLGSRPDLTIRIIKSGTAAAMISGIIVAPSALSHLL
MQSPPTPTAFVNCGVFGAINRYYDGGIGENVEFTPVGLYGDGVPRMTGTK
ILRDICSVLRAGKYKYTVTVDNPGKFDVFLIFAELYYNASDARVFNVEVG
AKEIHEVKEIDVFAEVGKYRPFILQLTDIDVDSTITIEGKSVKAMPMISG
FLVYPAGVVQREKMPLFVADELFDVRDKTSRKLPKALPLSDSTPLRDVID
DLDADDPKPQMILNCGKEMAIENVSLTGWTESQAGCIPSFRRPRIIDTRH
WRKELSCTYRTTQAGPFGYRIESLTKGMYRVDLIFCEYEEHDLRRFAVSL
LGNEEITFTVSFREADYMKVKVVSSIIQVDSSITIRVDPGDTIEGFLSAV
AISFVDDLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom
IPR039155MLEC