Ggra9275.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9275.t1
Unique NameGgra9275.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Homology
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BLAST of Ggra9275.t1 vs. uniprot
Match: A0A2V3ILT8 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILT8_9FLOR)

HSP 1 Score: 369 bits (946), Expect = 7.690e-123
Identity = 180/330 (54.55%), Postives = 240/330 (72.73%), Query Frame = 0 
Query:    4 DQLINRYVRWHRQNRHTAPRLVLRFNETHPGVGDRFLSLVTAFVMASFSDRVLLLDWIQPNSIFQFFLPTQ-LRDLKFKEEDRLEEQN-SKSIYFCDRLCARPYTLNQLLRPEHFVIFPQGTTSSAHFLCGHFTRTHPQLALSRTFENISDSLNNVSPHMFAAVFDAMLKPSPKLLKLVGERSTLFQKPYIGIHARLGKGLGEGGTRFPTKLDPTHIASCLVGPALKVGQDHGVQQYYLATDTVPFRDVFETVLKKRNAKAKMIRFDDIVPVHTKGCQMNITECYNTMIELIILSNSIHIVAIQSSFSKVAGYIGNVTVDSRGHATQCVE 331
              L+NRY +WHR+NR  APRLV+RFNET+PGVGDRF +LV+AF++ASFS+RVLLLDWIQP  +  FF P+  +  ++F + DR EEQ  + S Y CD+ C +   L  +L  +HF+I+PQG T+S   L  HF+ THP+L LS+ F N++D + NV  H+ ++ F+AMLKP+  L KL+ +R    ++P+IG+HARLG GLGE G RF +   P  +A C V  AL  G  HG+++YYLATDTVPFRDVFE VL +    A +IRFDDI+PVHTKGC+ N +EC +TM+ELI+LS S +IVA +SSFS+VAGYIGNVTV+S G   QC++
Sbjct:  106 QHLVNRYAKWHRENRRKAPRLVVRFNETNPGVGDRFSTLVSAFIIASFSNRVLLLDWIQPYPLSHFFSPSSAMPGIEFTDADRREEQQKASSRYICDKQCTKKLHLGHVLGSKHFIIYPQGATTSPQHLVAHFSTTHPRLPLSKVFANLTDVVTNV--HVLSSAFNAMLKPAAPLKKLLEKRKRALKQPFIGVHARLGAGLGETGPRFGSGHSPEQVAKCFVKSALGSGDTHGIRKYYLATDTVPFRDVFENVLLRERPNASLIRFDDIMPVHTKGCKNNASECASTMMELIVLSKSSYIVASKSSFSRVAGYIGNVTVESLGVIKQCMD 433
The following BLAST results are available for this feature:
BLAST of Ggra9275.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILT87.690e-12354.55Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 182..328
e-value: 1.2E-8
score: 36.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:701874..702869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9275.t1Ggra9275.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 701874..702869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9275.t1 ID=Ggra9275.t1|Name=Ggra9275.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MLQDQLINRYVRWHRQNRHTAPRLVLRFNETHPGVGDRFLSLVTAFVMAS
FSDRVLLLDWIQPNSIFQFFLPTQLRDLKFKEEDRLEEQNSKSIYFCDRL
CARPYTLNQLLRPEHFVIFPQGTTSSAHFLCGHFTRTHPQLALSRTFENI
SDSLNNVSPHMFAAVFDAMLKPSPKLLKLVGERSTLFQKPYIGIHARLGK
GLGEGGTRFPTKLDPTHIASCLVGPALKVGQDHGVQQYYLATDTVPFRDV
FETVLKKRNAKAKMIRFDDIVPVHTKGCQMNITECYNTMIELIILSNSIH
IVAIQSSFSKVAGYIGNVTVDSRGHATQCVE*
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