Ggra9276.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9276.t1
Unique NameGgra9276.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length987
Homology
BLAST of Ggra9276.t1 vs. uniprot
Match: A0A2V3ILQ5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ5_9FLOR)

HSP 1 Score: 1048 bits (2711), Expect = 0.000e+0
Identity = 528/961 (54.94%), Postives = 670/961 (69.72%), Query Frame = 0
Query:   20 VSSLPLAHVCGASDQTGGYYYEQTEQQRFEALLQRTVLAGFQNLSLSQFSDSKPVTPQFFRNFRSIVAHPSELRPHVHPRVVFGRKQWNELLMHHAESRRHGNEGTWSTYFERQTVWQGPLSEIIAYLAGLERDGLTLVYDGRPLSTDTEFERYRNKLKNLSSAIEIMNSTLAPSLLLCAFWTGVSEEINQDFLPMYNAETCIKAMVAWSKVLLAHRVYHCSPACPFTVDDRNRAFLWNTRIPWKMRNDDYTAGVSLALAYDVLHSKMSLTDQRTIRSALAMLVMNRFSWGICPVSSQHCPDVFTEPHNIVDINAMYHSNLFLTNLAIEGESDFDAYTAEVLRTNSAEGFNSELNYRFLTLLTVYMQHAVYPDGSTVQGSNFYTNGLREGSLALVAAQRRGLNLLDTPRFRNLIHFSSQTMEPWECGKLPGESSEATHNTFVALFNYLYPASEFISIMWRQRIGQLIPRSCSRLGWRSVSQLLFLAREPVPFKHDYGILPDSIRKHFAFRVYFAQRGLLVARTGLGKSYAYLQFDIRCDAALDGRDAGGRGDVIFAVGGHTWVQSFGEHSREKSLVHIDGVAQESVVPPARLVRIASEQGVLIAVADLTYAYNTQWARGRDEQSRYNTVFDRKKNTSHRIVVRFSQQESKLPFSNISIPASFEKRIWKRRSRIQQAESVIRSVCLLDG-RTSESYTALGAASGTLIISDYVNPGRGSHLIESYLALSNGTTVVNLSCSQNPYEPQCALTLLSPRKD-KAVIHIMSDVPLRARTEKVDARVRIIVSAEARRPIRIWTGIAADGLPALKMRLLKEGLVVEHGTKTDFLQADHDGGISAATQKFSTTLHNGDFVILNATSMKPVLDGTQTFEANLNVRADSKSGMDDVISTCGHRTSVRTRIHVLSCESKVCNEVSGSRRACSKASGREEWRGQLKRGNTYNVRIMVESIDGLLSVVEARYRLR 978
            V S+P+  VC   ++   +    T +QR    L++ +    Q LSLS F   +  + +     RSI A PSELRP+ HPR+VFGR  WN+LL HH+E  R GN   WSTY E  TV +GPLS+ I++LA LE++G T  YDGR +S +  ++ YR KLK L+S++ +MNS  APS  LCAFW+GV E   Q  +  + AETCI A VAWSK+LLAHR YHC+P CPF V D  R+FLWN +IPWKMRNDDYTAG SLALAYDVL+ KMS +++RTIRSALA+LVMNRF WGICP+SS+ CPDVF EPH I +  AMYHSNLFLTNLAIE E+ FD Y A VLR   + GFN EL++RFL L+  YM++ VY DGSTV+    +  G+REGSLAL+AA RRGLNLLDT RFRNLIH SSQ +EPW CGKL GE+S AT+N+FVALFN+LYP SE +S++WRQR+G L PRSCSRL WR+V+Q++ L R PV    +  +L  +  + F   V F  RGL VAR GL  ++A L FD+R D ALDGR  GGRGD  FAV G TWV+SFG  SRE+S++HIDG+AQE++ PPA +  + SE    + VADLTY+YN QWARGR  Q+RYN V+D  + TS R+ +RF ++E  LP  NIS+PA  E RIWKR+ R +    V+RSVC+L G R     T+ G+++G+LIISD+V+ G+G+H IESYLALS GT V N+SCS+NP +PQC++TL   +K    VIH+ ++V LR R E+V  R RI+VS  +R P+R W  IA  G+ ALKM L K+GL V HG   DFL A  DGG+     + +  L  G  V L+ + M PVL G QTFEAN  +RA S    +D+ISTC H T+VRTRI+V +C+   C EV G    CS ASGREEW G L+ GNTY+V+I VESI+GL SVVE  +++R
Sbjct:   25 VYSIPVGDVCNPFERNLAFGEALTYEQRVARSLEKAIRTESQTLSLS-FDAEEATSLRLTGRIRSISAKPSELRPYSHPRIVFGRSAWNDLLQHHSERYRGGNRNDWSTYLEHHTVIRGPLSKTISHLANLEKNGFTSDYDGRAVSQNEAYKSYRRKLKTLASSVHLMNSIHAPSFFLCAFWSGVDELETQPQIG-HKAETCINAAVAWSKILLAHRAYHCNPVCPFAVHDPRRSFLWNVKIPWKMRNDDYTAGSSLALAYDVLYDKMSKSERRTIRSALALLVMNRFVWGICPISSKGCPDVFAEPHRIHNSKAMYHSNLFLTNLAIEAEAGFDNYAASVLREGRSNGFNYELHFRFLALMRAYMENGVYADGSTVEDGMAFVLGIREGSLALIAAYRRGLNLLDTARFRNLIHHSSQIIEPWGCGKLLGETSRATYNSFVALFNFLYPESEVVSVLWRQRMGSLKPRSCSRLPWRTVTQIVLLGRAPVLDTQNLDVLSRATEEVFPLNVLFPHRGLFVARAGLTSNHAVLWFDVRSDVALDGRSVGGRGDFTFAVNGRTWVKSFGTQSRERSILHIDGLAQEAIAPPAEIRHVDSEGANTVMVADLTYSYNVQWARGRKPQTRYNIVYDDLRMTSSRVAMRFLEEEVNLPPYNISVPAGVENRIWKRQLRKEAVRKVVRSVCVLQGSRNGTQSTSRGSSTGSLIISDFVDAGKGTHRIESYLALSKGTLVKNMSCSRNPSDPQCSVTLTDQKKKTNVVIHVHANVLLRVRREEVSNRTRIVVSCISRAPVRFWMAIAVAGVHALKMDLTKDGLFVTHGRDIDFLHATQDGGVRRPQAQEAQMLVTGKIVRLHPSLMTPVLQGKQTFEANFVLRAQSDHEKEDLISTCHHGTTVRTRINVFACDLGDCEEVHGLHHPCSPASGREEWSGNLQNGNTYHVKIAVESIEGLRSVVEVEHKVR 983          
BLAST of Ggra9276.t1 vs. uniprot
Match: A0A2V3ILR0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR0_9FLOR)

HSP 1 Score: 443 bits (1139), Expect = 2.900e-138
Identity = 265/772 (34.33%), Postives = 397/772 (51.42%), Query Frame = 0
Query:  103 GRKQWNELLMHHAESRRHGNEGTWSTYFERQTVWQGPLSEIIAYLAGLERDGLTLVYDGR---PLSTDTEFER----YRNKLKNLSSAIEIMNSTLAPSLLLCAFWTGVSEEINQDFLPMYNAETCIKAMVAWSKVLLAHRVYHCSPACPFTVDDRNRAFLWNTRIPWKMRNDDYTAGVSLALAYDVLHSKMSLTDQRTIRSALAMLVMNRFSWGICPVSSQHCPDVFTEPHNIVDINAMYHSNLFLTNLAIEGESDFDAYTAEVLRTNSAEGFNSELNYRFLTLLTVYMQHAVYPDGSTVQGSNFYTNGLREGSLALVAAQRRGLNLLDTPRFRNLIHFSSQTMEPWECGKLPGESSEAT--HNTFVALFNYLYPASEFISIMWRQRIGQLIPRSCSRLGW--RSVSQLLFLAREPVPFKHDYG----ILPDSIRKHFAFRVYFAQRGLLVARTGLGKSYAYLQFDIRCDAALDGRDAGGRGDVIFAVGGHTWVQSFG-EH---SREKSLVHIDGVAQESVVPPARLVRIASEQGVLIAVADLTYAYNTQWARGRDEQS--RYNTVFDRKKNTSHRIVVRFSQQESKLPFS------NISIPASFEKRI---------------WKRRSRIQQAESVIRSVCLLDGRTSESYTALGAASGTLIISDYVNPGRGSHLIESYLALSNGTTVVNLSCSQNPYEPQCALTLLSPRKDKAVIHIMS-DVPLRARTEKVDARVRIIVSAEARRPIRIWTGIAADGLPALKMRLLKEG 831
            G+ +W  LL  HA      +  +WS    + T   GP SE+I  LA LE++G T ++D R   P S   E  R    YR+ +K L+  +++M    + SL LCAFW  VSE+ +  FL     + CI A VAW+KVL+AHR +HC+P C     D  +++LWN    W++ ND YTAG +LALAYDVL+ +MS   +  +RSALA+LVM R++WG+   ++   P+  T PH IV    MYHSNL+LTNLAIEGE+ F  Y   +L  ++A GFN++LN +F  L+  YM H+VYPDGS+ +    Y    REGSL  +AA RRG NLL TPRFRN+IH  +Q  EPW+C  L G SS     +  FV LF Y YP      ++W QR G+      +   W  ++++Q++    E      D       LP + +KHF       +RGL++AR+   +  +Y+ FD R D+   G D   RG + F+     W+     EH   SR+ SL+HIDG+AQ    P   +++        IA ADLTY YN QWA+     S    + +  R+  ++++ +  F+  E   P+       + ++   FE+ +               WKR  R +  +  IRS+ +   R+ +     G      ++ D V+ G G H  ESYL L +   +   S S +  + +C + + SP  +   +H++        R E+ D   R+IV +       +W  +        +  +++EG
Sbjct:    2 GQTEWQNLLKRHANPHTFDSNISWSHSLRKLTFQHGPESELILKLAALEQNGHTALFDARIPPPPSGSAEQRRQYNAYRSAIKPLADHLKLMKEVHSHSLFLCAFWAQVSEKQSNPFLSTNTTQMCINAAVAWAKVLMAHRTFHCNPNCTTPKYDTEKSYLWNVDSIWEVSNDWYTAGFTLALAYDVLYQRMSSAQRTVVRSALALLVMKRWTWGVVDETTPSNPNAETHPHRIVSNWGMYHSNLYLTNLAIEGETGFVPYAQHILSQSNAVGFNAKLNRKFEALINAYMTHSVYPDGSSFEDGYTYHTAFREGSLGFLAAHRRGHNLLATPRFRNIIHNVAQMFEPWQCAPLVGHSSGGGLGYPAFVGLFRYAYPDGVLPQMVWAQRFGKRFANDANCRTWWIQTMTQMVVFGDEHQQNLDDVADAPETLPPAAKKHFPLAYVSTRRGLIIARSSYSQMSSYMHFDARPDSFYLGHDNADRGAITFSALKRRWLDDLPWEHNFDSRKHSLMHIDGLAQAVKAPSVTILKAVDTLSSTIASADLTYTYNVQWAQAWQGPSIGTGDVLEYRQDGSTYKKMYTFADPEEHSPWDLGWPMEDDAVDIGFERNMTMKGYPHLAAFGMNEWKRHYREKHLDYFIRSIVM--ARSDKDRVGYG------VLVDSVSAGPGKHTFESYLILQDDVDLEKASSSCD--QSRCKIVVSSPAGESLEVHVLVLGNKASFRIERFDGHKRLIVKSVREVSEEVWIALYPRNRDPGRFEMVREG 763          
BLAST of Ggra9276.t1 vs. uniprot
Match: A0A2V3J5A4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A4_9FLOR)

HSP 1 Score: 369 bits (948), Expect = 3.330e-107
Identity = 263/796 (33.04%), Postives = 386/796 (48.49%), Query Frame = 0
Query:   76 PQFFRNFRSIVAHPSELRPHVHPRVVFGRKQWNELLMHHAESRRHGNEGTWSTYFERQTVWQGPLSEIIAYLAGLERDGLTLVYDGRP---LSTDTEFERYRNKLKNLSSAIEIMNSTLAP--SLLLCAFWTGVSEEI------NQDFLPMYNAETCIKAMVAWSKVLLAHRVYHCSPACPFTVDDRNRAFLWNTRIPWKMRNDDYTAGVSLALAYDVLHSKMSLTDQRTIRSALAMLVMNRFSWGICPVSSQHCPDVFTEPHNIVDINAMYHSNLFLTNLAIEGESDFDAYTAEVLRTNSAEGFNSELNYRFLTLLTVYMQHAVYPDGSTVQGSNFYTNGLREGSLALVAAQRRGLNLLDTPRFRNLIHFSSQTMEPWECGKLPGESSEA--THNTFVALFNYLYPASEFISIMWRQRIGQLIPRS--CSRLGWRSVSQLLFLAREPVPFKHDYGILPDS------IRKHFAFRVYFAQRGLLVARTGLGKSYAYLQFDIRCDAALDGRDAGGRGDVIFAVGGHTWVQSF----GEHSREKSLVHIDGVAQESVVPPARLVRIASEQGVLIAVADLTYAYNTQWAR---GRDEQSRYNTVFDRKKNTSHRIVVRFSQQE--------------------SKLPFSNISIPASFEKRIWKRRS--RIQQAESVIRSVCLLDGRTSESYTALGAASGTLIISDYVNPGRGSHLI---ESYLALSN--GTTVVNLSCSQNPYEPQCALTLLSPRKDKAVIHIMS-DVPLRARTEKVDAR---VRIIVSAEARRPIRIW 812
            P  F N     A  ++L P VHPR++F  + W EL+  + +   +    +WS +    +   GP SE +  LA +ER G T  Y G       TDT+ ER    L+ ++S I  +NST     S  LCA WT V E        +  F P    E CI A VAW+KVLL+HR  +C+  CP T     RA LW T+  +++ +D Y A   +AL  DV + + + T +R +RSA+A+ V  + SWG    S ++ P+    PH I    AMYHS L+L NL +EGE+D+DAY + VL  +   GFN  LN RF +L++ YM H++YPDGST +    Y   LREG L L+AA RRGLN+ DT RFR LIH ++Q +EPW CG++ G SS     +  + +LF Y+Y       ++WR R+G     +  C    ++ ++ +     E     H       S        KHF    Y  +RGLL+AR+   ++  Y+ FD R D+   G D   RG   +     TW+          SR+ SL+HIDG+AQ+   P  R+++       +IA ADLTYAYN QWAR   G     +Y  V+     T  R +  F+  E                    ++  F+    P    K +W  R   R+     V+RSV L  G    +++A   + G  I++D      G+ +I   ESYL L+   G  V N  C  N     C + L +    +  + ++S    L   TE+  +     R+++ +E  +  +IW
Sbjct:   53 PSLFGNVSVTPAPAADLEPGVHPRILFDIEGWFELIGRYVDRNTYDLPSSWSRHIRVLSATYGPDSEFLISLAEMERSGDTAAYTGEENLVAITDTQRER----LEPIASTI--LNSTEGTYQSFFLCALWTTVQEIAVAERGPSASFTPR-TPEDCILATVAWAKVLLSHRAVNCAGDCP-TESSGERAHLWLTQRRFEVSDDWYAASFPMALTLDVFYDRFTATQRRIVRSAIALFVHKKASWGSTITSDKYSPNADLHPHRIFSNWAMYHSYLYLANLVLEGETDYDAYASAVLTESEESGFNVGLNQRFTSLISAYMNHSIYPDGSTFEDGYTYFIALREGGLGLLAAHRRGLNIFDTDRFRGLIHNAAQMLEPWHCGRIIGHSSGGGVLYPAWTSLFRYVYRDGPLPQMIWRHRMGDDFKNNNPCRIQWFQDMTPMTIFGGE-----HGNATRASSPAGLGEYLKHFPLSYYSPRRGLLIARSSESENALYIHFDARPDSFFPGHDNADRGGFTYTAYRSTWIDDHWWKANLDSRKHSLLHIDGLAQDEKAPSVRMIKRDDNGDEVIAAADLTYAYNFQWARNWPGESPLRQYVNVYHAD-GTLVRELEWFTDAEYGHPIDFGWPSDDDGEDLGFTRAQFNTHGDPDVGFKGMWTWRKPYRMTPLSWVVRSVILNRG----NHSANEDSPGYFIVADSARVS-GTPMINSFESYLILAEDVGVDVENSWCEGN----WCRIVLKNGGSAETDLQVVSRGERLSFHTEQYMSEKLYTRLVIRSEMEQEEQIW 825          
The following BLAST results are available for this feature:
BLAST of Ggra9276.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ILQ50.000e+054.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILR02.900e-13834.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A43.330e-10733.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..986
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR008929Chondroitin AC/alginate lyaseGENE3D1.50.10.100Chondroitin AC/alginate lyasecoord: 93..480
e-value: 4.0E-11
score: 44.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:705602..708562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9276.t1Ggra9276.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 705602..708562 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9276.t1 ID=Ggra9276.t1|Name=Ggra9276.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=987bp
MLHCTSSLALALYFCFLITVSSLPLAHVCGASDQTGGYYYEQTEQQRFEA
LLQRTVLAGFQNLSLSQFSDSKPVTPQFFRNFRSIVAHPSELRPHVHPRV
VFGRKQWNELLMHHAESRRHGNEGTWSTYFERQTVWQGPLSEIIAYLAGL
ERDGLTLVYDGRPLSTDTEFERYRNKLKNLSSAIEIMNSTLAPSLLLCAF
WTGVSEEINQDFLPMYNAETCIKAMVAWSKVLLAHRVYHCSPACPFTVDD
RNRAFLWNTRIPWKMRNDDYTAGVSLALAYDVLHSKMSLTDQRTIRSALA
MLVMNRFSWGICPVSSQHCPDVFTEPHNIVDINAMYHSNLFLTNLAIEGE
SDFDAYTAEVLRTNSAEGFNSELNYRFLTLLTVYMQHAVYPDGSTVQGSN
FYTNGLREGSLALVAAQRRGLNLLDTPRFRNLIHFSSQTMEPWECGKLPG
ESSEATHNTFVALFNYLYPASEFISIMWRQRIGQLIPRSCSRLGWRSVSQ
LLFLAREPVPFKHDYGILPDSIRKHFAFRVYFAQRGLLVARTGLGKSYAY
LQFDIRCDAALDGRDAGGRGDVIFAVGGHTWVQSFGEHSREKSLVHIDGV
AQESVVPPARLVRIASEQGVLIAVADLTYAYNTQWARGRDEQSRYNTVFD
RKKNTSHRIVVRFSQQESKLPFSNISIPASFEKRIWKRRSRIQQAESVIR
SVCLLDGRTSESYTALGAASGTLIISDYVNPGRGSHLIESYLALSNGTTV
VNLSCSQNPYEPQCALTLLSPRKDKAVIHIMSDVPLRARTEKVDARVRII
VSAEARRPIRIWTGIAADGLPALKMRLLKEGLVVEHGTKTDFLQADHDGG
ISAATQKFSTTLHNGDFVILNATSMKPVLDGTQTFEANLNVRADSKSGMD
DVISTCGHRTSVRTRIHVLSCESKVCNEVSGSRRACSKASGREEWRGQLK
RGNTYNVRIMVESIDGLLSVVEARYRLRRHWISGDH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008929Chondroitin_lyas