Ggra9213.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra9213.t1 vs. uniprot
Match: A0A2V3IP63 (RNA-binding protein Musashi-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP63_9FLOR) HSP 1 Score: 561 bits (1446), Expect = 7.240e-199 Identity = 290/355 (81.69%), Postives = 319/355 (89.86%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDIDHEIMQKHVEVKRAEPKQALEARRGREAAGAALPFSSSQPSSSSFNVSPQKQHTHLPQTSQTLQSHLASATSIPYASFPSALPNAAPLSMARSPPTQAPFQSFSPWSGVFSSGAGSSWNAVQSSSAFVSTKMKEAVSMRNSHSAATGATSISPPSSSIASQSSPRATPAGMGFFTPAQPYSPDLAQCAYDAFYSPSAPLTSFASDLASVIPSARTERRFHPYSTRERIERSYR 355
MRDRLTGHPRGFGFVTY+DQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSR+NAWRATKKVFIGGLPATCRE+DLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDIDHEIMQKHVEVKRAEPKQAL+ARRGREAA A LPFSS+Q S+SS +VSPQKQ +HL QTSQ LQSHLASA SIPY S+PSALPN + +++ARSPP Q+PF S SPWSGVFSSGAGSSW +VQ+SS + S K+K+ S+R+ H + S+SP SS++ SQ++ R +PAGMGFFTPAQ YSPDLAQCAYDAFY+ SAPL SFASDL SVIPS RTERRFHPYSTRERIERSYR
Sbjct: 51 MRDRLTGHPRGFGFVTYEDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRSNAWRATKKVFIGGLPATCREADLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDIDHEIMQKHVEVKRAEPKQALDARRGREAAAAPLPFSSTQSSTSSLHVSPQKQQSHLSQTSQNLQSHLASAVSIPYGSYPSALPNTSSIALARSPPAQSPFHSISPWSGVFSSGAGSSWTSVQASSGYGSGKVKDPTSIRSVHPSGVAPNSLSPQSSAVPSQTTSRTSPAGMGFFTPAQSYSPDLAQCAYDAFYAASAPLNSFASDLTSVIPSTRTERRFHPYSTRERIERSYR 405
BLAST of Ggra9213.t1 vs. uniprot
Match: R7Q6L6 (HnRNP-like protein, RNA recognition motif (RRM)-containing protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6L6_CHOCR) HSP 1 Score: 352 bits (902), Expect = 1.320e-116 Identity = 214/376 (56.91%), Postives = 249/376 (66.22%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDID-HEIMQKHVEVKRAEPKQALEARRGREAAGAALPFSSSQPSSSSFN---------VSPQKQHT-----HLPQTSQTLQSHLASATSIPYASFPSALPNAAPLSMARSPPTQAPFQSFSPWSGVFSSG----AGSSWNA-VQSSSAFVSTKMKEAVSMRNSHSAATGATSISPPSSSIASQSSPRATPAGMGFFTPAQPYSPDLAQCAYDAFYSPSAPLTSFASDL-ASVIPSARTERRFHPYSTRERIERSYR 355
MRDRLTGHPRGFGFVTYDDQLVAERVA EFHELDGRQVEAKIAVPRSECVP R NAWRATKKVF+GGLPATCRE++L AHF RFGD+AECQVMYDHQTGNSRGFGFVTFTSE TVD VVD+D HEI+ KHVEVKRAEPKQALEARRGREA + K HT H P + + AS +IP + P + +P Q+PF F PWS +FSS +GSSW+A V + A ++ ++ + + +S AT TS+ SS+ S S+ +GMGFFTPAQPY+PDLAQC Y+A+Y S F A +PSAR ERRFHPY TRER++RSYR
Sbjct: 23 MRDRLTGHPRGFGFVTYDDQLVAERVATEFHELDGRQVEAKIAVPRSECVPALRTNAWRATKKVFVGGLPATCREAELLAHFKRFGDVAECQVMYDHQTGNSRGFGFVTFTSEATVDTVVDLDQHEILAKHVEVKRAEPKQALEARRGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAKHHTQSVTAHAPYAAVAATNSAASVPAIP----------SPPSASHSTPAAQSPFPGFGPWSSLFSSAPGASSGSSWSALVAAERASLNAAPGPSLPVSSPNSNATS-TSVPAGGSSLRSPSN-----SGMGFFTPAQPYTPDLAQCVYNAYYGSSTTPEGFEIGAHAQGLPSARAERRFHPYPTRERVDRSYR 382
BLAST of Ggra9213.t1 vs. uniprot
Match: A0A7S1TL02 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TL02_9RHOD) HSP 1 Score: 199 bits (507), Expect = 3.540e-57 Identity = 95/153 (62.09%), Postives = 123/153 (80.39%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDIDH-EIMQKHVEVKRAEPKQALEARRGREAAG 152
MRDR TGHPRGFGFVT+ D VA RVA E HELDGR VEAK+A+PR+EC P R N +A+KKVF+GGLP+ C +++LH +F FG + EC VMYDHQTGNSRGFGFVTF+ +++D+V++I+H +I+ K+VEVKRAEPKQ LE+R+ + + G
Sbjct: 114 MRDRSTGHPRGFGFVTFMDGTVAYRVAHEKHELDGRPVEAKLALPRNECPTPQRTNGSKASKKVFVGGLPSNCGDTELHRYFQHFGTVMECLVMYDHQTGNSRGFGFVTFSDLVSIDRVMEIEHHKILGKYVEVKRAEPKQVLESRKSKPSNG 266
BLAST of Ggra9213.t1 vs. uniprot
Match: A0A7S0ZCZ9 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCZ9_9RHOD) HSP 1 Score: 184 bits (467), Expect = 2.480e-50 Identity = 85/152 (55.92%), Postives = 117/152 (76.97%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRN-NAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDIDHEIMQKHVEVKRAEPKQALEARRGREAA 151
MRDR +GHPRGFGFVT++D A+RVA E HELDGR VEAK AVPR+EC P +R + R ++K+F+GGLPA+C + L HF+ +G++ E QVMYDH TGNSRGF FVT++ + ++D+V++++H +M K VEVK AEPK L+A++ R+ A
Sbjct: 48 MRDRNSGHPRGFGFVTFEDDFAADRVAREKHELDGRLVEAKKAVPRAECTPSTRAVTSSRGSRKIFVGGLPASCDDESLKTHFMSYGEVLEAQVMYDHNTGNSRGFAFVTYSDDSSIDRVMEVEHFVMGKLVEVKHAEPKHLLDAKKTRDPA 199
BLAST of Ggra9213.t1 vs. uniprot
Match: A0A5J4Z311 (Putative RNA-binding protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z311_PORPP) HSP 1 Score: 177 bits (448), Expect = 3.110e-46 Identity = 83/162 (51.23%), Postives = 117/162 (72.22%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDIDHEIMQKHVEVKRAEPKQALEARRGREAAGAALPFSSSQP 162
MRDR++GHPRGFGFVT++D+ V++ VAAE HELDGR VEAK AVPRS+C + + + ++K+F+GGLP+ C + + +F RFG+I E VM+DH TGNSRGFGFVT+ + VD V+ ++HEI+ K VE+K AEPK ++AR+ ++ + P S P
Sbjct: 258 MRDRVSGHPRGFGFVTFEDEAVSDHVAAEQHELDGRAVEAKRAVPRSDCSGAVKVPSSKGSRKLFVGGLPSACGDHEFRTYFSRFGEILELSVMFDHTTGNSRGFGFVTYYDDRAVDLVMQMEHEILGKRVEIKHAEPKHLMDARKTKDGSSGTGPGSGLTP 419
BLAST of Ggra9213.t1 vs. uniprot
Match: M2XIP2 (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XIP2_GALSU) HSP 1 Score: 164 bits (415), Expect = 7.720e-44 Identity = 84/153 (54.90%), Postives = 109/153 (71.24%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVD-IDHEIMQKHVEVKRAEPKQALEARRGREAAG 152
MRD+ TGHPRGFGFVT++ + A+R A + HELDGRQVEAK AVP++E + +R+ + T+K+F+GGLP +C E D +F R G + E +MYDHQTG SRGFGFVTF+SE V+KV + HEI K VEVK+AEPK E RR ++ G
Sbjct: 82 MRDKHTGHPRGFGFVTFEKEESADRAATKRHELDGRQVEAKKAVPKAEYI--TRSQVTKPTRKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFEQSQHEIKGKIVEVKKAEPKHFSEGRRMKDLGG 232
BLAST of Ggra9213.t1 vs. uniprot
Match: R7QHG3 (Putative Heterogeneous nuclear ribonucleoprotein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG3_CHOCR) HSP 1 Score: 160 bits (404), Expect = 5.550e-41 Identity = 89/152 (58.55%), Postives = 104/152 (68.42%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATK-KVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVV-----DIDHEIMQKHVEVKRAEPKQALEARR 146
MRDR TGHPRGFGFVT+ D A A+ H+LDGRQVEAK AVPR+E A TK KVF+GGLP++C + A+F +FG++ + QVM DH TGNSRGFGFVTF SE TV+ VV + DHEIM K VEVKRAEPK A RR
Sbjct: 186 MRDRHTGHPRGFGFVTFADDDAAGAAASRRHDLDGRQVEAKRAVPRNE-------GAHHTTKCKVFVGGLPSSCGPDEFRAYFSQFGEVVDAQVMIDHNTGNSRGFGFVTFGSEATVNSVVGPGKSNTDHEIMGKCVEVKRAEPKGAPNDRR 330
BLAST of Ggra9213.t1 vs. uniprot
Match: M2XNR8 (Heterogeneous nuclear ribonucleoprotein A1/A3 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XNR8_GALSU) HSP 1 Score: 152 bits (384), Expect = 1.550e-39 Identity = 80/151 (52.98%), Postives = 106/151 (70.20%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDID-HEIMQKHVEVKRAEPK-QALEARRGRE 149
MRD+ TGHPRGFGFVT+ D VA+ VA+ H LDGRQVEAK AVP++E ++N + TKK+F+GG+ ++C + D +F +FG + + +MYDHQTG SRGFGF+TF S VDKV H I K VEVK AEPK Q++E+R+ +E
Sbjct: 63 MRDKYTGHPRGFGFVTFQDDSVADLVASLSHILDGRQVEAKKAVPKAEV--STKNETTKTTKKLFVGGISSSCSDEDFLVYFQKFGAVLDAHIMYDHQTGKSRGFGFITFCSVEAVDKVFQTPRHVIKGKVVEVKVAEPKHQSVESRKVKE 211
BLAST of Ggra9213.t1 vs. uniprot
Match: A0A2V3J3F1 (Putative RNA-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F1_9FLOR) HSP 1 Score: 152 bits (384), Expect = 2.760e-38 Identity = 90/177 (50.85%), Postives = 108/177 (61.02%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSE----CVPPSRNNAWRA---------------------TK-KVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVV-----DIDHEIMQKHVEVKRAEPKQALEARR 146
MRDR TGHPRGFGFVT+ D+ A A+ H+LDGRQVEAK AVPRSE P N ++ A TK KVF+GGLP+ C + A+F +FG++ + QVM DH TGNSRGFGFVTF +E TV+ VV + DHEIM K VEVKRAEPK + RR
Sbjct: 144 MRDRHTGHPRGFGFVTFADEDAATAAASRRHDLDGRQVEAKRAVPRSEGSSASTAPGHNPSFPAAPRGQRYNDAPGAPPHRAHHTTKCKVFVGGLPSGCGGEEFRAYFSQFGEVIDAQVMIDHNTGNSRGFGFVTFANEATVNAVVGPGKSNTDHEIMGKCVEVKRAEPKGVSQDRR 320
BLAST of Ggra9213.t1 vs. uniprot
Match: S8D6B9 (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D6B9_9LAMI) HSP 1 Score: 145 bits (366), Expect = 2.590e-37 Identity = 75/142 (52.82%), Postives = 95/142 (66.90%), Query Frame = 0
Query: 1 MRDRLTGHPRGFGFVTYDDQLVAERVAAEFHELDGRQVEAKIAVPRSECVPPSRNNAWRATKKVFIGGLPATCRESDLHAHFIRFGDIAECQVMYDHQTGNSRGFGFVTFTSELTVDKVVDID--HEIMQKHVEVKRAEPKQ 140
M D++TG PRGFGFVT+ DQ VAE+V + H +DGR VE K VPR E ++ TKK+F+GGLP + E DL +F +G I E Q+M DH+TG SRGFGFVTF SE V+KV+ HE+ K VE+KRAEPK+
Sbjct: 32 MMDKVTGRPRGFGFVTFSDQEVAEKVLQQDHVIDGRSVEVKRTVPREEY----QSRGVSKTKKIFVGGLPVSMNEDDLREYFSSYGTIVEHQIMLDHKTGRSRGFGFVTFDSEDAVEKVLSDGRMHELSGKQVEIKRAEPKR 169 The following BLAST results are available for this feature:
BLAST of Ggra9213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra9213.t1 ID=Ggra9213.t1|Name=Ggra9213.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=356bpback to top |