Ggra9235.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9235.t2
Unique NameGgra9235.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length454
Homology
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A2V3IF80 (WD repeat protein iqw1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF80_9FLOR)

HSP 1 Score: 533 bits (1373), Expect = 3.540e-181
Identity = 277/452 (61.28%), Postives = 341/452 (75.44%), Query Frame = 0
Query:    1 MHPAYVTFATFSSDASQIVASYYMDAVHVFNRRQQSQSGPYYPSFKFNSERKRVVWLLIQEAAERLLNGSVGCAKTAIAKANSVLELEPQNILALLYKAESLLLRENYSDFREAFETLQLLINLIREQPRLITALWGSDGPMCPPCFPESIGNWERKAQIWLMIFEFQQIRAMYKMIPY---SPVGVLQPGVNGLVTKRRFEHLRELCSELMERRWKLFSKQPTSNGHRSTNS--PGSMYDCSLLRDDIHRDALGTEEESSRLYSTEFSRLRKQVLVRLVEKLASSKLNMLLFAFDEKIADLEPRNPNSQTNRRLATTKEYWIRVMNQDHIPHHFARELKALEAEEKRLLAGFDSEALWGVRPRKELPCKRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPD 447
            + PAYVTFATFS DA+QIVASYYMDAVHVF+RR QS +      F+ NSE+KRV+W  IQEA+  ++NG   C K  IA AN VL LEP NILALLYKAESLL R+N SDFR A E LQ +I +++E PR ITALWGSDGP  P CFP S+ +W+ KA++WLMIFEF+QI AMY+MIP+   SP    +PG+ GLVT+RRFE+LRELC ELMERR K F K   +NG  S+NS  PG M D + LR +I + A GTE+E + LY +  S+ RKQVL  L +  A+ +LN L F F + +ADL P +       R+++TKE W R+M+ + +P  FARELKALEA EKRLL  FDSE LWGVR   ++PC+R+HGH+SE+TDIKEARF+G+DNQVVLSGSDDGFVY+W+A T E+LTRV AD+QIVNCVLPHPYRSMI+ SGID+TIKVLTP+
Sbjct:  265 IQPAYVTFATFSPDANQIVASYYMDAVHVFDRRIQSPTASCLSGFRTNSEKKRVIWHFIQEASNAIVNG---CVKVTIALANRVLNLEPNNILALLYKAESLLRRKNCSDFRVACECLQQIIAIVKEDPRSITALWGSDGPHLPQCFPVSLVSWQLKAEVWLMIFEFRQIVAMYRMIPHRLESPGW--RPGITGLVTRRRFEYLRELCRELMERRSKFFRKIHPTNGQTSSNSVPPGYMNDSTALRAEICKAATGTEKEVAHLYKSRASQQRKQVLDVLADMFAT-RLNELFFEFSDTVADLPPHDGCLHGTLRMSSTKEVWRRIMDGEEVPERFARELKALEAAEKRLLEKFDSEVLWGVRSSDDIPCRRFHGHKSEQTDIKEARFFGSDNQVVLSGSDDGFVYIWSATTSEVLTRVMADEQIVNCVLPHPYRSMIIASGIDSTIKVLTPE 710          
BLAST of Ggra9235.t2 vs. uniprot
Match: R7Q9N3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9N3_CHOCR)

HSP 1 Score: 258 bits (658), Expect = 4.170e-75
Identity = 157/449 (34.97%), Postives = 241/449 (53.67%), Query Frame = 0
Query:    5 YVTFATFSSDASQIVASYYMDAVHVFNRRQQSQSGPYYPSFKFNSERKRVVWLLIQEAAERLLNGSVGCAKTAIAKANSVLELEPQNILALLYKAESLLLRENYSDFREAFETLQLLINLIREQPRLITALWGSDGPMCPPCFPESIGNWERKAQIWLMIFEFQQIRAMYKMIPYSPVGVLQPGVNGLVTKRRFEHLRELCSELMERRWK--LFSKQPTSNGHRSTNSPGSMYDCSLLRDDIHRDALGTEEESSRLYSTEFSRLRKQVLVRLVEKLASSKLNMLLFAFDEKIAD-LEPRNPNSQTNRRLATTKEYWIRVMNQDHIPHHFARELKALEAEEKRLLAGFDSE---ALWGVRPRKELPCKRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPD 447
            Y TFAT+SSD  Q+VAS++ DAVHVF+  Q   S P    F    +++ V++  +Q+++  + +        A++ AN+VL++EP N+LAL+ +AE+ L R  Y D R +F T   ++ L+ +    I+ LWG + P  PPC P    + + +A IW+ +F++++   M +M+P   V +    ++  + K R E L  L S++ + R +  LF K                     L+  +++ ALG   E S+LY T  S  R   L R+ +         +   F+  + D L   + N  +       ++      ++D +      E+     +   LL  F  +    +WG  P  +   + +HG  S +T+IKEARFYGA NQVV+SGSDDG VYMW+A T ELLTR+  DDQIVNCVLPHP RSMIL SGID+TIKV++P+
Sbjct:  271 YATFATYSSDGRQVVASFFGDAVHVFDLAQDDTSVPCRSPFLTRPQKRAVIFKWLQQSSTTIDSDK------ALSTANNVLQVEPDNLLALVLRAEAFLRRRRYGDLRSSFATYSSILTLLEQDHTRISQLWGFNKPDGPPCMPPDSSHCKERADIWMQVFQYKKAYIMLRMLPGRRVAIFDRHLSKSIFKTRLEQLNVLISQIEDYRKEAGLFPK---------------------LKRVVYKRALGDLYECSQLYQTRASAARGVTLQRIFDSFFEGS-RTIRKDFETYVFDVLHQDDHNIHSGDTWEVIEQCSTGSNDEDEVEDQDRNEIPKF-LDNLHLLKEFSEDQQMGIWGPPPAAQDKWRSFHGAISRQTEIKEARFYGAKNQVVVSGSDDGLVYMWSATTGELLTRIPGDDQIVNCVLPHPTRSMILNSGIDSTIKVISPE 690          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A395HZ30 (WD40 repeat-like protein n=1 Tax=Aspergillus homomorphus (strain CBS 101889) TaxID=1450537 RepID=A0A395HZ30_ASPHC)

HSP 1 Score: 97.4 bits (241), Expect = 8.400e-18
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 0
Query:  354 WGVRPRK------ELPCKR----YHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPDLSSSEE 453
            +G+ PRK      + PC      Y GH + KT +K+  FYG D++ V+SGSD G +++W   TC+L+  + AD ++VN +  HPY   I  SGIDNTIK+ +PD  + EE
Sbjct:  904 YGLEPRKREYVDLDAPCSSHTRVYRGHCNVKT-VKDVNFYGLDDEFVVSGSDSGHIFIWDRKTCKLVNILEADSEVVNVIQGHPYEPTIAASGIDNTIKIFSPDRRAQEE 1012          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A2I2FLH5 (Wd and tetratricopeptide repeat protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A2I2FLH5_9EURO)

HSP 1 Score: 93.6 bits (231), Expect = 1.500e-16
Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  342 KRLLAGFDSEALWGVRPRKELPC----KRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPDLSSSE 452
            +RLL  +  +         ++PC    + Y GH + KT +K+  +YG D++ V+SGSD G V++W   TC+L+  +  D ++VN V  HPY   I  SGIDNTIK+ +PD  + E
Sbjct:  926 ERLLRNYGFQRTKRHNVHSDIPCSSHTRTYRGHCNVKT-VKDVNYYGMDDEYVVSGSDSGHVFIWDRKTCDLVNILEGDSEVVNVVQGHPYEPTIAASGIDNTIKIFSPDRHAQE 1039          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A1L9WXT2 (Uncharacterized protein n=4 Tax=Aspergillus TaxID=5052 RepID=A0A1L9WXT2_ASPA1)

HSP 1 Score: 93.2 bits (230), Expect = 1.980e-16
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0
Query:  354 WGVRPRK------ELPCKR----YHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPDLSSSEE 453
            +G+ PR+      ++PC      Y GH + KT +K+  FYG D++ V+SGSD G +++W   TC+L+  +  D ++VN V  HPY   I  SGIDNTIK+ +PD  + ++
Sbjct:  907 YGLHPRQREYVHLDVPCSSHTRVYRGHCNVKT-VKDVNFYGLDDEFVVSGSDSGHIFIWDRKTCKLVNILEGDSEVVNVVQGHPYEPTIAASGIDNTIKIFSPDRRAQDD 1015          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A319BY37 (WD40 repeat-like protein n=4 Tax=Aspergillus TaxID=5052 RepID=A0A319BY37_9EURO)

HSP 1 Score: 93.2 bits (230), Expect = 2.270e-16
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0
Query:  354 WGVRPRK------ELPCKR----YHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPDLSSSEE 453
            +G+ PR+      ++PC      Y GH + KT +K+  FYG D++ V+SGSD G +++W   TC+L+  +  D ++VN V  HPY   I  SGIDNTIK+ +PD  + ++
Sbjct:  910 YGLHPRQREYVHLDVPCSSHTRVYRGHCNVKT-VKDVNFYGLDDEFVVSGSDSGHIFIWDRKTCKLVNILEGDSEVVNVVQGHPYEPTIAASGIDNTIKIFSPDRRAQDD 1018          
BLAST of Ggra9235.t2 vs. uniprot
Match: J9JWQ1 (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9JWQ1_ACYPI)

HSP 1 Score: 92.4 bits (228), Expect = 2.620e-16
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 0
Query:  365 KRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTP 446
            +RY+GH +  TDIKEA F+G+ NQ +++GSDDG  ++W   T   L  +  D  IVNC+ PHP   ++  SGIDN +K+ TP
Sbjct:  519 RRYYGHCNTSTDIKEANFFGSQNQFIVAGSDDGLFFIWEKNTENNLLILKGDTSIVNCIQPHPSEFLLATSGIDNEVKLWTP 600          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A2P8ABK0 (WD repeat protein iqw1 n=2 Tax=Elsinoe australis TaxID=40998 RepID=A0A2P8ABK0_9PEZI)

HSP 1 Score: 92.0 bits (227), Expect = 4.710e-16
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 0
Query:  361 ELPC----KRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPD 447
            E+PC    + Y GH + KT +K+  FYG D++ V+SGSDDG +++W   T +LLT +  D ++VN V  HPY  ++ VSGID+TIK+ +PD
Sbjct:  894 EVPCAPHTRSYQGHCNVKT-VKDVNFYGLDDEYVVSGSDDGNLFIWDRRTSKLLTILEGDGEVVNVVQGHPYEPLLAVSGIDDTIKIFSPD 983          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A2H8THQ4 (WD and tetratricopeptide repeats protein 1 n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=A0A2H8THQ4_9HEMI)

HSP 1 Score: 91.7 bits (226), Expect = 4.730e-16
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0
Query:  365 KRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTP 446
            +RY+GH +  TDIKEA F+G  NQ +++GSDDG  ++W   T   L  +  D  IVNCV PHP   M+  SGIDN +K+ +P
Sbjct:  530 RRYYGHCNTSTDIKEANFFGNQNQFIVAGSDDGLFFVWEKNTENNLLILKGDSSIVNCVQPHPSEFMLATSGIDNEVKLWSP 611          
BLAST of Ggra9235.t2 vs. uniprot
Match: A0A3D8R9T4 (Uncharacterized protein n=1 Tax=Aspergillus mulundensis TaxID=1810919 RepID=A0A3D8R9T4_9EURO)

HSP 1 Score: 91.7 bits (226), Expect = 6.200e-16
Identity = 41/96 (42.71%), Postives = 63/96 (65.62%), Query Frame = 0
Query:  362 LPCKR----YHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPDLSSSEE 453
            +PC      Y GH + KT +K+A F+G +++ V+SGSD G +++W   TC+L+  +  DD++VN V  HPY   I VSGID+TIK+ +PD  + E+
Sbjct:  903 VPCSSHTRVYRGHCNVKT-VKDANFFGLNDEYVVSGSDSGHLFIWERDTCKLVNILKGDDEVVNVVQGHPYEPTIAVSGIDDTIKIFSPDQRAQED 997          
The following BLAST results are available for this feature:
BLAST of Ggra9235.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IF803.540e-18161.28WD repeat protein iqw1 n=1 Tax=Gracilariopsis chor... [more]
R7Q9N34.170e-7534.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A395HZ308.400e-1841.82WD40 repeat-like protein n=1 Tax=Aspergillus homom... [more]
A0A2I2FLH51.500e-1638.26Wd and tetratricopeptide repeat protein n=3 Tax=As... [more]
A0A1L9WXT21.980e-1639.09Uncharacterized protein n=4 Tax=Aspergillus TaxID=... [more]
A0A319BY372.270e-1639.09WD40 repeat-like protein n=4 Tax=Aspergillus TaxID... [more]
J9JWQ12.620e-1646.34Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A2P8ABK04.710e-1646.15WD repeat protein iqw1 n=2 Tax=Elsinoe australis T... [more]
A0A2H8THQ44.730e-1647.56WD and tetratricopeptide repeats protein 1 n=1 Tax... [more]
A0A3D8R9T46.200e-1642.71Uncharacterized protein n=1 Tax=Aspergillus mulund... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 360..403
e-value: 0.74
score: 17.8
coord: 406..445
e-value: 1.2
score: 16.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 303..445
e-value: 4.6E-11
score: 44.3
IPR045151DDB1- and CUL4-associated factor 8-likePANTHERPTHR15574WD REPEAT DOMAIN-CONTAINING FAMILYcoord: 5..448
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:456845..458206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9235.t2Ggra9235.t2Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 456845..458206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9235.t2 ID=Ggra9235.t2|Name=Ggra9235.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=454bp
MHPAYVTFATFSSDASQIVASYYMDAVHVFNRRQQSQSGPYYPSFKFNSE
RKRVVWLLIQEAAERLLNGSVGCAKTAIAKANSVLELEPQNILALLYKAE
SLLLRENYSDFREAFETLQLLINLIREQPRLITALWGSDGPMCPPCFPES
IGNWERKAQIWLMIFEFQQIRAMYKMIPYSPVGVLQPGVNGLVTKRRFEH
LRELCSELMERRWKLFSKQPTSNGHRSTNSPGSMYDCSLLRDDIHRDALG
TEEESSRLYSTEFSRLRKQVLVRLVEKLASSKLNMLLFAFDEKIADLEPR
NPNSQTNRRLATTKEYWIRVMNQDHIPHHFARELKALEAEEKRLLAGFDS
EALWGVRPRKELPCKRYHGHQSEKTDIKEARFYGADNQVVLSGSDDGFVY
MWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGIDNTIKVLTPDLSS
SEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR045151DCAF8
IPR036322WD40_repeat_dom_sf