Ggra9219.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra9219.t1
Unique Name	Ggra9219.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	515

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000075_pilon	contig	tig00000075_pilon:413510..415054 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	6500.XP_005103795.1
Preferred name	URI1
PFAMs	Prefoldin
Max annot lvl	33208\|Metazoa
KEGG ko	ko:K17560
GOs	GO:0000003,GO:0000122,GO:0000428,GO:0001558,GO:0003674,GO:0003682,GO:0003712,GO:0003714,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0007276,GO:0007283,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009719,GO:0009725,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010563,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0010921,GO:0010923,GO:0010941,GO:0014070,GO:0016591,GO:0019208,GO:0019212,GO:0019219,GO:0019220,GO:0019222,GO:0019953,GO:0022414,GO:0023051,GO:0023057,GO:0030234,GO:0030880,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032504,GO:0032870,GO:0032991,GO:0033993,GO:0035303,GO:0035305,GO:0040008,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045892,GO:0045934,GO:0045936,GO:0048232,GO:0048519,GO:0048523,GO:0048545,GO:0048583,GO:0048585,GO:0048609,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051219,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0051704,GO:0051707,GO:0051716,GO:0055029,GO:0060255,GO:0060548,GO:0061695,GO:0065007,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0080090,GO:0098772,GO:0140110,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Evalue	2.95e-08
EggNOG OGs	KOG3130@1\|root,KOG3130@2759\|Eukaryota,38DAV@33154\|Opisthokonta,3BDM1@33208\|Metazoa,3CVP7@33213\|Bilateria
Description	phosphatase inhibitor activity
COG category	K
BRITE	ko00000,ko01009

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9219	Ggra9219	Gracilaria gracilis GNS1m male	gene	tig00000075_pilon 413510..415054 +

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9219.t1.start1	Ggra9219.t1.start1	Gracilaria gracilis GNS1m male	start_codon	tig00000075_pilon 413510..413512 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9219.t1.CDS1	Ggra9219.t1.CDS1	Gracilaria gracilis GNS1m male	CDS	tig00000075_pilon 413510..415054 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9219.t1.exon1	Ggra9219.t1.exon1	Gracilaria gracilis GNS1m male	exon	tig00000075_pilon 413510..415054 +

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9219.t1.stop1	Ggra9219.t1.stop1	Gracilaria gracilis GNS1m male	stop_codon	tig00000075_pilon 415052..415054 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ggra9219.t1	Ggra9219.t1	Gracilaria gracilis GNS1m male	polypeptide	tig00000075_pilon 413510..415054 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000075_pilon:413510..415054+
coding sequence from alignment at tig00000075_pilon:413510..415054+

mRNA sequence

>Ggra9219.t1 ID=Ggra9219.t1|Name=Ggra9219.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=515bp
MAKALNPQSALPSSESSVHERLLALESKQLAYRSLSHRLLELPRKLRRRA
LVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLG
RVERGLFELLDEDDGEHNVAAALASSIRVPAADGNGKNGTDVKTVYGKAG
TVASASQNERHKETNDDTTGDKTAATRGTTPVSVLKNTTNQPSASTEKKR
VRFSNPLIHPSIKSTPQPCFISPPKPKSRSRKKKNTASSSSSPKLTAPDV
PPTGAKAEKHEKADNASNAGGHSKAKVMDELRSAVEKAQQQVLHDGIVNI
TEVYEGDEDTPSRVELPRGFEPDTRINFGDDSEEFLDMTGADNGAEEEGS
SREDYLDALAEVEKESQAEEERMATEKRRGELEREKKEFGQGLAKGFFGA
APKKRARADQQHVPKAVAEGGDVPSTQVAKLSTASAVAAVVERKPSRKSK
RRNRRPRSSASAFPPCTPTALLAPDKTQLDALGDADADADADEAERQTSL
FLRLRGVGKDAVRS*

spliced messenger RNA

>Ggra9219.t1 ID=Ggra9219.t1|Name=Ggra9219.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1545bp|location=Sequence derived from alignment at tig00000075_pilon:413510..415054+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAAAAGCTCTCAATCCCCAATCCGCGCTGCCGTCTTCCGAAAGCTC
CGTGCATGAACGTCTGCTCGCTCTAGAATCGAAGCAACTTGCGTATCGCA
GTCTATCACATCGTCTTCTAGAACTTCCACGGAAGCTGCGTCGCCGCGCG
TTGGTGCCTGTGGGACCACGCTTATACTTACCAGGCGAGCTGGTTCGTAC
AAATGAAATTCTCGTTATGCTCGGTTCGGCTGGTGAGGCTACGTATTTCG
CTGAGCGTTCAGCTTGGCAAGCGTATGAAATAGTTCGACAGAGGCTTGGA
AGGGTTGAACGTGGGTTGTTTGAACTGCTGGATGAAGACGATGGTGAGCA
CAACGTAGCTGCTGCTCTTGCGAGCAGTATACGAGTGCCGGCTGCGGACG
GAAACGGAAAGAATGGCACTGATGTTAAAACTGTGTACGGAAAGGCTGGA
ACTGTTGCATCCGCCTCACAGAATGAGAGGCACAAGGAGACGAATGACGA
TACTACTGGAGACAAAACTGCGGCTACAAGAGGTACAACACCAGTTAGCG
TTTTGAAGAACACAACAAACCAACCGAGCGCGTCTACAGAAAAGAAGAGA
GTGAGATTCAGTAATCCTCTTATACACCCCTCAATCAAGTCAACGCCACA
ACCATGCTTCATCTCGCCGCCGAAACCGAAATCAAGGTCGAGGAAGAAGA
AGAACACGGCTTCTTCCTCATCCTCGCCCAAGTTGACCGCACCTGACGTG
CCACCTACAGGAGCGAAGGCAGAGAAACACGAAAAAGCAGACAATGCTTC
CAACGCTGGAGGACATTCGAAAGCGAAGGTGATGGACGAACTGCGATCAG
CGGTTGAGAAGGCGCAGCAACAAGTGCTGCACGATGGGATCGTGAACATT
ACAGAAGTCTACGAAGGAGACGAGGATACTCCTAGCAGAGTGGAGCTACC
ACGCGGCTTTGAGCCGGACACGCGCATAAACTTTGGCGATGATAGCGAAG
AGTTTCTGGACATGACTGGCGCGGACAACGGGGCGGAAGAGGAAGGCTCT
TCTCGCGAGGACTACCTTGACGCGCTTGCTGAGGTGGAAAAAGAGTCGCA
AGCGGAAGAGGAACGTATGGCGACTGAAAAGAGAAGAGGCGAACTGGAAC
GAGAGAAGAAAGAGTTCGGACAGGGCCTGGCAAAGGGCTTCTTCGGCGCG
GCGCCGAAAAAGCGCGCGCGGGCAGATCAGCAACACGTGCCAAAGGCGGT
GGCAGAGGGCGGCGACGTGCCGAGCACGCAGGTGGCGAAGCTGTCGACGG
CCTCGGCAGTGGCTGCGGTGGTGGAGAGGAAGCCGTCGCGCAAGTCGAAA
CGACGGAACCGTCGGCCTCGCTCAAGCGCCAGCGCGTTTCCGCCGTGCAC
GCCGACGGCGCTGCTCGCGCCCGACAagacgcagctggacgcgctcggcg
acgcggacgcagacgcggacgcggacgaagcggaaaggcagacgTCGCTG
TTCCTGCGCCTGCGCGGCGTTGGTAAAGACGCGGTGCGCAGCTAG

protein sequence of Ggra9219.t1

>Ggra9219.t1 ID=Ggra9219.t1|Name=Ggra9219.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=515bp
MAKALNPQSALPSSESSVHERLLALESKQLAYRSLSHRLLELPRKLRRRA
LVPVGPRLYLPGELVRTNEILVMLGSAGEATYFAERSAWQAYEIVRQRLG
RVERGLFELLDEDDGEHNVAAALASSIRVPAADGNGKNGTDVKTVYGKAG
TVASASQNERHKETNDDTTGDKTAATRGTTPVSVLKNTTNQPSASTEKKR
VRFSNPLIHPSIKSTPQPCFISPPKPKSRSRKKKNTASSSSSPKLTAPDV
PPTGAKAEKHEKADNASNAGGHSKAKVMDELRSAVEKAQQQVLHDGIVNI
TEVYEGDEDTPSRVELPRGFEPDTRINFGDDSEEFLDMTGADNGAEEEGS
SREDYLDALAEVEKESQAEEERMATEKRRGELEREKKEFGQGLAKGFFGA
APKKRARADQQHVPKAVAEGGDVPSTQVAKLSTASAVAAVVERKPSRKSK
RRNRRPRSSASAFPPCTPTALLAPDKTQLDALGDADADADADEAERQTSL
FLRLRGVGKDAVRS*

mRNA from alignment at tig00000075_pilon:413510..415054+

Legend: start_codonpolypeptideCDSexonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra9219.t1 ID=Ggra9219.t1|Name=Ggra9219.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1545bp|location=Sequence derived from alignment at tig00000075_pilon:413510..415054+ (Gracilaria gracilis GNS1m male)
ATGGCAAAAGCTCTCAATCCCCAATCCGCGCTGCCGTCTTCCGAAAGCTC
CGTGCATGAACGTCTGCTCGCTCTAGAATCGAAGCAACTTGCGTATCGCA
GTCTATCACATCGTCTTCTAGAACTTCCACGGAAGCTGCGTCGCCGCGCG
TTGGTGCCTGTGGGACCACGCTTATACTTACCAGGCGAGCTGGTTCGTAC
AAATGAAATTCTCGTTATGCTCGGTTCGGCTGGTGAGGCTACGTATTTCG
CTGAGCGTTCAGCTTGGCAAGCGTATGAAATAGTTCGACAGAGGCTTGGA
AGGGTTGAACGTGGGTTGTTTGAACTGCTGGATGAAGACGATGGTGAGCA
CAACGTAGCTGCTGCTCTTGCGAGCAGTATACGAGTGCCGGCTGCGGACG
GAAACGGAAAGAATGGCACTGATGTTAAAACTGTGTACGGAAAGGCTGGA
ACTGTTGCATCCGCCTCACAGAATGAGAGGCACAAGGAGACGAATGACGA
TACTACTGGAGACAAAACTGCGGCTACAAGAGGTACAACACCAGTTAGCG
TTTTGAAGAACACAACAAACCAACCGAGCGCGTCTACAGAAAAGAAGAGA
GTGAGATTCAGTAATCCTCTTATACACCCCTCAATCAAGTCAACGCCACA
ACCATGCTTCATCTCGCCGCCGAAACCGAAATCAAGGTCGAGGAAGAAGA
AGAACACGGCTTCTTCCTCATCCTCGCCCAAGTTGACCGCACCTGACGTG
CCACCTACAGGAGCGAAGGCAGAGAAACACGAAAAAGCAGACAATGCTTC
CAACGCTGGAGGACATTCGAAAGCGAAGGTGATGGACGAACTGCGATCAG
CGGTTGAGAAGGCGCAGCAACAAGTGCTGCACGATGGGATCGTGAACATT
ACAGAAGTCTACGAAGGAGACGAGGATACTCCTAGCAGAGTGGAGCTACC
ACGCGGCTTTGAGCCGGACACGCGCATAAACTTTGGCGATGATAGCGAAG
AGTTTCTGGACATGACTGGCGCGGACAACGGGGCGGAAGAGGAAGGCTCT
TCTCGCGAGGACTACCTTGACGCGCTTGCTGAGGTGGAAAAAGAGTCGCA
AGCGGAAGAGGAACGTATGGCGACTGAAAAGAGAAGAGGCGAACTGGAAC
GAGAGAAGAAAGAGTTCGGACAGGGCCTGGCAAAGGGCTTCTTCGGCGCG
GCGCCGAAAAAGCGCGCGCGGGCAGATCAGCAACACGTGCCAAAGGCGGT
GGCAGAGGGCGGCGACGTGCCGAGCACGCAGGTGGCGAAGCTGTCGACGG
CCTCGGCAGTGGCTGCGGTGGTGGAGAGGAAGCCGTCGCGCAAGTCGAAA
CGACGGAACCGTCGGCCTCGCTCAAGCGCCAGCGCGTTTCCGCCGTGCAC
GCCGACGGCGCTGCTCGCGCCCGACAagacgcagctggacgcgctcggcg
acgcggacgcagacgcggacgcggacgaagcggaaaggcagacgTCGCTG
TTCCTGCGCCTGCGCGGCGTTGGTAAAGACGCGGTGCGCAGCTAG

Coding sequence (CDS) from alignment at tig00000075_pilon:413510..415054+

>Ggra9219.t1 ID=Ggra9219.t1|Name=Ggra9219.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1545bp|location=Sequence derived from alignment at tig00000075_pilon:413510..415054+ (Gracilaria gracilis GNS1m male)
ATGGCAAAAGCTCTCAATCCCCAATCCGCGCTGCCGTCTTCCGAAAGCTC
CGTGCATGAACGTCTGCTCGCTCTAGAATCGAAGCAACTTGCGTATCGCA
GTCTATCACATCGTCTTCTAGAACTTCCACGGAAGCTGCGTCGCCGCGCG
TTGGTGCCTGTGGGACCACGCTTATACTTACCAGGCGAGCTGGTTCGTAC
AAATGAAATTCTCGTTATGCTCGGTTCGGCTGGTGAGGCTACGTATTTCG
CTGAGCGTTCAGCTTGGCAAGCGTATGAAATAGTTCGACAGAGGCTTGGA
AGGGTTGAACGTGGGTTGTTTGAACTGCTGGATGAAGACGATGGTGAGCA
CAACGTAGCTGCTGCTCTTGCGAGCAGTATACGAGTGCCGGCTGCGGACG
GAAACGGAAAGAATGGCACTGATGTTAAAACTGTGTACGGAAAGGCTGGA
ACTGTTGCATCCGCCTCACAGAATGAGAGGCACAAGGAGACGAATGACGA
TACTACTGGAGACAAAACTGCGGCTACAAGAGGTACAACACCAGTTAGCG
TTTTGAAGAACACAACAAACCAACCGAGCGCGTCTACAGAAAAGAAGAGA
GTGAGATTCAGTAATCCTCTTATACACCCCTCAATCAAGTCAACGCCACA
ACCATGCTTCATCTCGCCGCCGAAACCGAAATCAAGGTCGAGGAAGAAGA
AGAACACGGCTTCTTCCTCATCCTCGCCCAAGTTGACCGCACCTGACGTG
CCACCTACAGGAGCGAAGGCAGAGAAACACGAAAAAGCAGACAATGCTTC
CAACGCTGGAGGACATTCGAAAGCGAAGGTGATGGACGAACTGCGATCAG
CGGTTGAGAAGGCGCAGCAACAAGTGCTGCACGATGGGATCGTGAACATT
ACAGAAGTCTACGAAGGAGACGAGGATACTCCTAGCAGAGTGGAGCTACC
ACGCGGCTTTGAGCCGGACACGCGCATAAACTTTGGCGATGATAGCGAAG
AGTTTCTGGACATGACTGGCGCGGACAACGGGGCGGAAGAGGAAGGCTCT
TCTCGCGAGGACTACCTTGACGCGCTTGCTGAGGTGGAAAAAGAGTCGCA
AGCGGAAGAGGAACGTATGGCGACTGAAAAGAGAAGAGGCGAACTGGAAC
GAGAGAAGAAAGAGTTCGGACAGGGCCTGGCAAAGGGCTTCTTCGGCGCG
GCGCCGAAAAAGCGCGCGCGGGCAGATCAGCAACACGTGCCAAAGGCGGT
GGCAGAGGGCGGCGACGTGCCGAGCACGCAGGTGGCGAAGCTGTCGACGG
CCTCGGCAGTGGCTGCGGTGGTGGAGAGGAAGCCGTCGCGCAAGTCGAAA
CGACGGAACCGTCGGCCTCGCTCAAGCGCCAGCGCGTTTCCGCCGTGCAC
GCCGACGGCGCTGCTCGCGCCCGACAagacgcagctggacgcgctcggcg
acgcggacgcagacgcggacgcggacgaagcggaaaggcagacgTCGCTG
TTCCTGCGCCTGCGCGGCGTTGGTAAAGACGCGGTGCGCAGCTAG