Ggra9225.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9225.t1
Unique Name	Ggra9225.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	74

Homology

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A2V3IRW1 (Ubiquitin-like protein 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW1_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 3.000e-42
Identity = 67/73 (91.78%), Postives = 72/73 (98.63%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEVILNDRLG+KVRVKCEPDDT+G+LK++VAALTGTR EKLRIQRANIVYKDHITLADYEIKDGQGLELFYN
Sbjct:    1 MIEVILNDRLGRKVRVKCEPDDTVGELKIMVAALTGTRPEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A176W1C7 (Ubiquitin-like domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W1C7_MARPO)

HSP 1 Score: 120 bits (300), Expect = 1.680e-33
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTRAEK+RIQ+  I+YKDHITLADYEI DG GLEL+YN
Sbjct:   53 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYIIYKDHITLADYEIHDGMGLELYYN 125

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A1C3L3A5 (Ubiquitin-like modifier HUB1, putative n=50 Tax=Eukaryota TaxID=2759 RepID=A0A1C3L3A5_PLAMA)

HSP 1 Score: 117 bits (294), Expect = 3.030e-33
Identity = 55/73 (75.34%), Postives = 63/73 (86.30%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIE+ILNDRLG+K+RVKC PDDTIG LK LVAA TGTRA+K+RIQ+   +YKDHITL DYEIKDG  LEL+YN
Sbjct:    1 MIEIILNDRLGKKIRVKCNPDDTIGDLKKLVAAQTGTRADKIRIQKWYTIYKDHITLQDYEIKDGMNLELYYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A1Z5RNL6 (Ubiquitin-like domain-containing protein n=32 Tax=Magnoliopsida TaxID=3398 RepID=A0A1Z5RNL6_SORBI)

HSP 1 Score: 117 bits (292), Expect = 6.110e-33
Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTRA+K+RIQ+   +YKDHITLADYEI DG GLEL+YN
Sbjct:    1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKRLVAAQTGTRADKIRIQKWYTIYKDHITLADYEIHDGMGLELYYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A087SRI5 (Ubiquitin-like protein 5 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SRI5_AUXPR)

HSP 1 Score: 117 bits (292), Expect = 6.110e-33
Identity = 57/73 (78.08%), Postives = 62/73 (84.93%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTR EKLRIQ+   VYKDHITLADYE+KDG  LEL+YN
Sbjct:    1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKLRIQKWYTVYKDHITLADYEVKDGMNLELYYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: W5EA75 (Ubiquitin-like domain-containing protein n=8 Tax=Triticeae TaxID=147389 RepID=W5EA75_WHEAT)

HSP 1 Score: 116 bits (291), Expect = 8.690e-33
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTRAEK+RIQ+   +YKDHITL DYEI DG GLEL+YN
Sbjct:    1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDYEIHDGMGLELYYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: A8J6M2 (Predicted protein n=17 Tax=Eukaryota TaxID=2759 RepID=A8J6M2_CHLRE)

HSP 1 Score: 116 bits (290), Expect = 1.230e-32
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTR EK+RIQ+   +YKDHITLADYEI DG GLEL+YN
Sbjct:    1 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYTIYKDHITLADYEIHDGMGLELYYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A803N8L2 (Ubiquitin-like domain-containing protein n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A803N8L2_CHEQI)

HSP 1 Score: 116 bits (290), Expect = 1.230e-32
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTRAEK+RIQ+   +YKDHITL DYEI DG GLEL+YN
Sbjct:    1 MIEVVLNDRLGKKVRVKCNKDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLEDYEIHDGMGLELYYN 73

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A368PPI2 (Ubiquitin-like domain-containing protein n=2 Tax=Setaria italica TaxID=4555 RepID=A0A368PPI2_SETIT)

HSP 1 Score: 118 bits (295), Expect = 1.370e-32
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIEV+LNDRLG+KVRVKC  DDTIG LK LVAA TGTRAEK+RIQ+   +YKDHITLADYEI DG GLEL+YN
Sbjct:   65 MIEVVLNDRLGKKVRVKCNEDDTIGDLKRLVAAQTGTRAEKIRIQKWYTIYKDHITLADYEIHDGMGLELYYN 137

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BLAST of Ggra9225.t1 vs. uniprot
Match: A0A0S4T9Q0 (Ubiquitin-like domain-containing protein n=5 Tax=Cryptosporidium TaxID=5806 RepID=A0A0S4T9Q0_CRYHO)

HSP 1 Score: 115 bits (289), Expect = 1.750e-32
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0

Query:    1 MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIVYKDHITLADYEIKDGQGLELFYN 73
            MIE++LNDRLG+K+RVKC PDDTIG LK LVA +TGTR +K+RIQ+   VYKDHITL DYEIKDG GLEL+YN
Sbjct:    1 MIEIVLNDRLGKKIRVKCNPDDTIGDLKKLVAEVTGTRWDKIRIQKWYNVYKDHITLEDYEIKDGMGLELYYN 73

The following BLAST results are available for this feature:

BLAST of Ggra9225.t1 vs. uniprot

BLAST of Ggra9225.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IRW1	3.000e-42	91.78	Ubiquitin-like protein 5 n=1 Tax=Gracilariopsis ch...	[more]
A0A176W1C7	1.680e-33	79.45	Ubiquitin-like domain-containing protein n=2 Tax=M...	[more]
A0A1C3L3A5	3.030e-33	75.34	Ubiquitin-like modifier HUB1, putative n=50 Tax=Eu...	[more]
A0A1Z5RNL6	6.110e-33	76.71	Ubiquitin-like domain-containing protein n=32 Tax=...	[more]
A0A087SRI5	6.110e-33	78.08	Ubiquitin-like protein 5 n=2 Tax=Auxenochlorella p...	[more]
W5EA75	8.690e-33	76.71	Ubiquitin-like domain-containing protein n=8 Tax=T...	[more]
A8J6M2	1.230e-32	76.71	Predicted protein n=17 Tax=Eukaryota TaxID=2759 Re...	[more]
A0A803N8L2	1.230e-32	76.71	Ubiquitin-like domain-containing protein n=4 Tax=P...	[more]
A0A368PPI2	1.370e-32	78.08	Ubiquitin-like domain-containing protein n=2 Tax=S...	[more]
A0A0S4T9Q0	1.750e-32	73.97	Ubiquitin-like domain-containing protein n=5 Tax=C...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 2..73 e-value: 0.0017 score: 27.6
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 11..70 e-value: 1.4E-8 score: 34.3
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 2..73 score: 12.095445
None	No IPR available	GENE3D	3.10.20.90		coord: 1..73 e-value: 3.0E-24 score: 86.7
None	No IPR available	PANTHER	PTHR13042:SF13	UBIQUITIN-LIKE PROTEIN 5	coord: 1..73
None	No IPR available	CDD	cd01791	Ubl_UBL5	coord: 1..71 e-value: 7.04346E-40 score: 123.582
IPR039732	Ubiquitin-like modifier Hub1/Ubl5	PANTHER	PTHR13042	UBIQUITIN-LIKE PROTEIN 5	coord: 1..73
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000075_pilon	contig	tig00000075_pilon:423588..423999 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9225.t1	Ggra9225.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000075_pilon 423588..423999 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9225.t1 ID=Ggra9225.t1|Name=Ggra9225.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=74bp
MIEVILNDRLGQKVRVKCEPDDTIGQLKLLVAALTGTRAEKLRIQRANIV
YKDHITLADYEIKDGQGLELFYN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin-like_dom
IPR039732	Hub1/Ubl5
IPR029071	Ubiquitin-like_domsf