Ggra9140.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9140.t1
Unique NameGgra9140.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
BLAST of Ggra9140.t1 vs. uniprot
Match: A0A2V3IHQ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ7_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 1.680e-54
Identity = 106/175 (60.57%), Postives = 122/175 (69.71%), Query Frame = 0
Query:    3 APFGR-GARFPALVAEVQAKELRYDGRAELDSKERALSLALTAGTFATLGVWAWKQNRRDDELEEVRIKDEVERLEKLRQEFMDVEEDEDAMDDEDLLASLRERLGEDGRRAENDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASSESLDMLKRMWEATDDD---PKRDDK 173
            +PFGR G   P  +A    KELRYDGR ELDSKERA SLALT GTFA LGVWAWKQNRRDD+LEEVRIKDEVERLEKLRQEF+ VEEDED+++DED +ASLRERLGE+ RRA++D                                A S+SLDMLKRMW+ATDDD   PK+D++
Sbjct:   56 SPFGRVGVHVPCALA----KELRYDGRQELDSKERAFSLALTGGTFAALGVWAWKQNRRDDQLEEVRIKDEVERLEKLRQEFLGVEEDEDSLNDEDFMASLRERLGEEERRADDDSSEPGAQPGDAGTAVKDKDTQD---------GAGSDSLDMLKRMWDATDDDAKPPKQDNE 217          
BLAST of Ggra9140.t1 vs. uniprot
Match: R7QA76 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA76_CHOCR)

HSP 1 Score: 149 bits (376), Expect = 1.330e-41
Identity = 93/176 (52.84%), Postives = 115/176 (65.34%), Query Frame = 0
Query:    5 FGRGARFPALVAEVQ------AKELRYDGRAELDSKERALSLALTAGTFATLGVWAWKQNRRDDELEEVRIKDEVERLEKLRQEFMDVEEDEDAMDDEDLLASLRERLGEDGRRAENDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASSESLDMLKRMWEATD-DDPKRDDK 173
            F +  R P + AE +      AK+LRYDGR ELD  E+A+SL LTAGTFA L VWAWK+NR++DELE VRIK+EVERL+KL+ EF+DVEEDE+ MDDEDLLASL++R+G D    + +  XXX                           A+S+SLDMLKRMWEATD DD  + DK
Sbjct:   85 FVQFGRVPRVYAETKTPTPAPAKQLRYDGRQELDGGEKAMSLTLTAGTFAGLLVWAWKRNRKEDELENVRIKEEVERLDKLKAEFIDVEEDEETMDDEDLLASLKQRIG-DTEEGDEEXXXXXEESVSVVEGEEGSDETEGQQAEGDTDVATSDSLDMLKRMWEATDGDDEAKKDK 259          
BLAST of Ggra9140.t1 vs. uniprot
Match: A0A7S4PC11 (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PC11_GUITH)

HSP 1 Score: 67.0 bits (162), Expect = 6.380e-10
Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:   17 EVQAKELRYDGRAELDSKERALSLALTAGTFATLGVWAWKQNRRDDELEEVRIKDEVERLEKLRQEFMDVEEDEDAMDDEDLLASLRERL-GEDGRRAEN 115
            +V+  E+ Y G  +L   E  +   +  G F    VW++ + +R+D  EE R+K EVER+EK ++EF+D+E   D + D+DLL+SL +RL GE G   ++
Sbjct:  161 DVEQVEIEYTGMRKLSLGENVVKYGILVGVFGGAAVWSYYEGKREDREEEERVKAEVERIEKWKKEFIDME---DVVSDDDLLSSLNKRLSGEAGEEVKD 257          
BLAST of Ggra9140.t1 vs. uniprot
Match: A0A5J4YLK6 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLK6_PORPP)

HSP 1 Score: 56.2 bits (134), Expect = 3.910e-6
Identity = 53/155 (34.19%), Postives = 76/155 (49.03%), Query Frame = 0
Query:   26 DGRAELDSK-ERALSLALTAGTFATLGVWAWKQNRRDDELEEVRIKDEVERLEKLRQEFMDVEEDEDAMDD-EDLLASLRERLGEDGRRAENDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASSESLDMLKRMWEAT--DDDPKRDDKPAP 176
            DG+  LD K E  L        F+   +  ++ N+ +  LE  RI+ E+ERLEKL+QEF+DV+E+ D  +   +++ SLR+RLG+ G    + G                         XXXXX    +  DMLKRMW+A+  D     DDK  P
Sbjct:  228 DGKRTLDPKTENMLGYGAAGIAFSAFALRMFQVNQNEKRLENERIEAEIERLEKLKQEFLDVDEESDEEETANEMMESLRKRLGQVGGSEGHSG-------------------AGGSEEXXXXXXXXKDERDMLKRMWDASGADSGGASDDKKKP 363          
BLAST of Ggra9140.t1 vs. uniprot
Match: M1VHI9 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHI9_CYAM1)

HSP 1 Score: 55.8 bits (133), Expect = 5.480e-6
Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   25 YDGRAELDSKERALSLALTAGTFATLGVWAWKQNRRDDELEEVRIKDEVERLEKLRQEFMDVEEDEDAMDDEDLLASLRERLGEDGRRAEND 116
            YD   E  ++ R ++  +   T A L +++ ++ +RD+E EE RI+ EV RLEK + EF+D ++  D ++DEDLLA+LRERL +  +    D
Sbjct:  154 YDPVGEQMARNRFIASIVVGVTVAALYLYSTERCKRDNEEEEKRIRAEVARLEKWKSEFVDAQQSND-VNDEDLLAALRERLQQQQKGGSTD 244          
The following BLAST results are available for this feature:
BLAST of Ggra9140.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IHQ71.680e-5460.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QA761.330e-4152.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S4PC116.380e-1038.00Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A5J4YLK63.910e-634.19Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M1VHI95.480e-639.13Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:84906..85439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9140.t1Ggra9140.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 84906..85439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9140.t1 ID=Ggra9140.t1|Name=Ggra9140.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MGAPFGRGARFPALVAEVQAKELRYDGRAELDSKERALSLALTAGTFATL
GVWAWKQNRRDDELEEVRIKDEVERLEKLRQEFMDVEEDEDAMDDEDLLA
SLRERLGEDGRRAENDGDAEGDAEEGEGEPDADSATAVMDKDKDDGDAAS
SESLDMLKRMWEATDDDPKRDDKPAPT*
back to top