Ggra9208.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9208.t1
Unique NameGgra9208.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length447
Homology
BLAST of Ggra9208.t1 vs. uniprot
Match: A0A2V3IP65 (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP65_9FLOR)

HSP 1 Score: 382 bits (982), Expect = 1.300e-126
Identity = 252/432 (58.33%), Postives = 307/432 (71.06%), Query Frame = 0
Query:   14 SEDEDQRNVLTAAKASEFCPKHYRLIAPRNALTHLDDISALSSLDYVDLTGNKLTSLSGLRNNHKIKTLIVRDNNLSDLTPVLKLSALRVLNIARNKFVSTDWLVHASFAGALLTLVANGNQIKELEGLSCLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIRVIPDSIKRLRSLSELRLAHNLISSLPTKQVLSSLACLKIVDLGHNRISSFEALAFIGNSIVNLNVRSNPATSEQDFTENLRKYCPKVEVIDGTRVAGGRRKLRINRLRIAAGFPIEKDRRFVRPPPKEVLARMQNGDGDKIDENEMQKDTNGKDAAEDERGNGVYEDGSNSGRGESFASTRKRSLPEDGAGEGDPEKCLEPSELIAQARAHVLGKAATQVIIPKASVPTQSKDTSKQKRKKRRTKDPERNQVESEFGIGGTSKW 445
            SEDE+++ VLTAAKA+EFC +HYRLIAPR   THLDD+S L +LDYVDLT NKL SL GLRNN +IKTLIVR NNLS LTPVLKLS+LRVLN A NKFVSTDWL+HASF+  LLTLVA+GNQI EL+GL  L    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX IR+IP S + LR+LSELRLAHN ISSLP K V  +L+ LKIVD+GHNRI++FE L F GNSIVNLNVR+N    E    + L+K+CPK+E+I+G RV+GGRRKLRINRLR+AAGFPIE DR+F RPPP + L R+      ++++  ++++ + +    D +   V E  ++S   +     R R +  D  G  D E CLEP E I QAR   LG   T   + +AS     K   +++RK    K+P   Q   +FG G  SKW
Sbjct:    7 SEDEEKQKVLTAAKAAEFCQRHYRLIAPRQGFTHLDDVSTLRALDYVDLTANKLRSLEGLRNNRQIKTLIVRGNNLSHLTPVLKLSSLRVLNTANNKFVSTDWLIHASFSKELLTLVASGNQIAELDGLVALQSVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRIIPTSFRNLRNLSELRLAHNRISSLPNKDVFKALSALKIVDVGHNRITTFEELCFDGNSIVNLNVRNNSVADEISVADRLQKWCPKLEIINGKRVSGGRRKLRINRLRVAAGFPIENDRKFARPPPAQALKRIAGDKDGEVEQRPVERNVDDRQHEMDMKRGKVEE--ADSLTEDQQTRKRYREVETDNPGREDDE-CLEPEEFIEQAREKSLGHI-TSANLQRASA---GKTRKRKRRKSYIGKEPSFKQA-PDFGSGCQSKW 430          
BLAST of Ggra9208.t1 vs. uniprot
Match: R7Q8U4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8U4_CHOCR)

HSP 1 Score: 211 bits (538), Expect = 4.860e-60
Identity = 171/460 (37.17%), Postives = 229/460 (49.78%), Query Frame = 0
Query:    7 ITESGNDSEDEDQRNVLTAAKASEFCPKHYRLIAPRNALTHLDDISALSSLDYVDLTGNKLTSLSGLRNNHKIKTLIVRDNNLSDLTPVLKLSALRVLNIARNKFVSTDWLVHASFAGALLTLVANGNQIKELEGLSCLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIRVIPDSIKRLRSLSELRLAHNLISSLPTKQVLSSLACLKIVDLGHNRISSFEALAFIGNSIVNLNVRSNPA-TSEQDFTENLRKYCPKVEVIDGTRVAGGRRKLRINRLRIAAGFPIEKDRRFVRPPPKEVLARMQNGDGDKIDENEMQKDTNGKDAAEDERGNGVYEDGSNSGRGESFASTRKRSLPEDGAGEGDPEKCLEPSELI--------------AQARAHVLGKAATQVII------PKASVPTQSKDTSKQKRKKRRTKDPERNQVESEFGIGGTSKW 445
            + +S +  +D    N+LT AKA+E CPK +RLIA     T L D+S LS+LDY+DL GN L                                             STDWL  A+FAG+L+ LVA GNQ+  LEG++ L                        XXXXXXXXX  R IP SI  L +L ELRLAHN +++LP K+VL+ L+ LKI+D+GHNRI++ ++LA    S+V LN+  NP  T E++FTE LRK CPK+E+ID  R+AGGRRKLR+NR R+ AG P+E +R+F RPP    +   Q G+    DE  +++D   K+ A       V    S++G  ES    RK      G  + D  +  EP                  A   A  +  A T+ I        + ++  QSK  +KQK     T   +R  VE  FG GG SKW
Sbjct:   10 LADSYDSDDDAPIGNILTTAKAAELCPKPHRLIARNGGFTSLADLSTLSALDYIDLRGNALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTDWLARATFAGSLVALVARGNQLVVLEGMASLRKLETIVLSNNQIEDLAPAMQLTSXXXXXXXXXXXRSIPPSITNLYNLRELRLAHNRLAALPPKEVLARLSSLKILDIGHNRITNIDSLAACSGSLVQLNIAGNPVCTKEENFTEALRKLCPKLEIIDARRIAGGRRKLRVNRQRLDAGMPLEPERKFARPPSAYYV---QKGN----DEKSLRRD---KEPA-------VL---SSAGGNESETKKRKADRTSQGMVQKDSMQRGEPPTXXXXXXXXXXXXXXXDALDAAQFIAMATTKAISVGNSNSSQLAIEKQSKPKTKQKSMGTVT---QRQSVE--FGSGGDSKW 444          
The following BLAST results are available for this feature:
BLAST of Ggra9208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IP651.300e-12658.33Protein phosphatase 1 regulatory subunit 7 n=1 Tax... [more]
R7Q8U44.860e-6037.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 98..124
e-value: 260.0
score: 1.7
coord: 54..76
e-value: 34.0
score: 8.9
coord: 145..166
e-value: 360.0
score: 0.6
coord: 167..189
e-value: 3.4
score: 16.7
coord: 215..238
e-value: 9.7
score: 13.4
coord: 190..214
e-value: 1.5
score: 17.9
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 123..144
e-value: 540.0
score: 1.4
coord: 167..195
e-value: 61.0
score: 9.2
coord: 215..236
e-value: 13.0
score: 14.7
coord: 54..75
e-value: 33.0
score: 11.3
coord: 145..166
e-value: 520.0
score: 1.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..345
NoneNo IPR availablePANTHERPTHR46652FAMILY NOT NAMEDcoord: 41..111
coord: 128..276
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 27..269
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 148..203
e-value: 3.0E-10
score: 39.7
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 169..190
score: 7.688853
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 217..238
score: 7.134402
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 56..77
score: 7.288416
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 125..146
score: 7.034293
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 192..213
score: 7.665751
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..123
e-value: 3.3E-15
score: 57.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 184..279
e-value: 4.7E-17
score: 63.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 124..183
e-value: 1.9E-10
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:389454..390794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9208.t1Ggra9208.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 389454..390794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9208.t1 ID=Ggra9208.t1|Name=Ggra9208.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=447bp
MKLSNAITESGNDSEDEDQRNVLTAAKASEFCPKHYRLIAPRNALTHLDD
ISALSSLDYVDLTGNKLTSLSGLRNNHKIKTLIVRDNNLSDLTPVLKLSA
LRVLNIARNKFVSTDWLVHASFAGALLTLVANGNQIKELEGLSCLGAVKT
LVLSHNRIENMTPVTALSSLTKLSLSSNEIRVIPDSIKRLRSLSELRLAH
NLISSLPTKQVLSSLACLKIVDLGHNRISSFEALAFIGNSIVNLNVRSNP
ATSEQDFTENLRKYCPKVEVIDGTRVAGGRRKLRINRLRIAAGFPIEKDR
RFVRPPPKEVLARMQNGDGDKIDENEMQKDTNGKDAAEDERGNGVYEDGS
NSGRGESFASTRKRSLPEDGAGEGDPEKCLEPSELIAQARAHVLGKAATQ
VIIPKASVPTQSKDTSKQKRKKRRTKDPERNQVESEFGIGGTSKWK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf