Ggra9274.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9274.t1
Unique NameGgra9274.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length156
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:699600..700067 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9274Ggra9274Gracilaria gracilis GNS1m malegenetig00000075_pilon 699600..700067 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9274.t1.start1Ggra9274.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 699600..699602 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9274.t1.CDS1Ggra9274.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 699600..700067 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9274.t1.exon1Ggra9274.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 699600..700067 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9274.t1.stop1Ggra9274.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 700065..700067 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9274.t1Ggra9274.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 699600..700067 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9274.t1 ID=Ggra9274.t1|Name=Ggra9274.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=156bp
MDKLSGLLGKATGADPGEGIEQTMKEKAVEELIQDKVEDIAGKKVAESEQ
VENIAEKIADAVADKVPTSMLGAGAMASMKDDDKSGSGSGIMAQASSLLG
GGGEQKKSDTGDLMGQAASFLGGGGGGGGGADDDEKKKGGAEDLIGQAAS
FLGKQ*
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spliced messenger RNA

>Ggra9274.t1 ID=Ggra9274.t1|Name=Ggra9274.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=468bp|location=Sequence derived from alignment at tig00000075_pilon:699600..700067+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACAAGCTTTCTGGACTGCTGGGAAAGGCCACGGGCGCCGATCCGGG
AGAAGGCATTGAACAAACCATGAAGGAGAAGGCTGTAGAGGAGCTAATTC
AAGACAAGGTGGAGGACATTGCGGGCAAAAAGGTGGCCGAATCCGAACAG
GTGGAGAACATCGCCGAGAAGATTGCTGATGCCGTCGCAGATAAAGTGCC
TACCTCCATGCTAGGCGCCGGAGCAATGGCGAGCATGAAGGACGATGATA
AGAGTGGATCGGGCTCTGGTATCATGGCACAGGCGTCCAGTTTGTTGGGC
GGTGGTGGAGAACAGAAAAAGAGTGACACCGGTGACTTGATGGGGCAGGC
TGCCAGTTTCCTtggtggtggtggtggtggtggtggtggtgCAGATGATG
ACGAGAAGAAGAAGGGTGGTGCTGAGGATTTGATCGGACAGGCAGCTAGC
TTCCTTGGAAAGCAATGA
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protein sequence of Ggra9274.t1

>Ggra9274.t1 ID=Ggra9274.t1|Name=Ggra9274.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=156bp
MDKLSGLLGKATGADPGEGIEQTMKEKAVEELIQDKVEDIAGKKVAESEQ
VENIAEKIADAVADKVPTSMLGAGAMASMKDDDKSGSGSGIMAQASSLLG
GGGEQKKSDTGDLMGQAASFLGGGGGGGGGADDDEKKKGGAEDLIGQAAS
FLGKQ*
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mRNA from alignment at tig00000075_pilon:699600..700067+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9274.t1 ID=Ggra9274.t1|Name=Ggra9274.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=468bp|location=Sequence derived from alignment at tig00000075_pilon:699600..700067+ (Gracilaria gracilis GNS1m male)
ATGGACAAGCTTTCTGGACTGCTGGGAAAGGCCACGGGCGCCGATCCGGG
AGAAGGCATTGAACAAACCATGAAGGAGAAGGCTGTAGAGGAGCTAATTC
AAGACAAGGTGGAGGACATTGCGGGCAAAAAGGTGGCCGAATCCGAACAG
GTGGAGAACATCGCCGAGAAGATTGCTGATGCCGTCGCAGATAAAGTGCC
TACCTCCATGCTAGGCGCCGGAGCAATGGCGAGCATGAAGGACGATGATA
AGAGTGGATCGGGCTCTGGTATCATGGCACAGGCGTCCAGTTTGTTGGGC
GGTGGTGGAGAACAGAAAAAGAGTGACACCGGTGACTTGATGGGGCAGGC
TGCCAGTTTCCTtggtggtggtggtggtggtggtggtggtgCAGATGATG
ACGAGAAGAAGAAGGGTGGTGCTGAGGATTTGATCGGACAGGCAGCTAGC
TTCCTTGGAAAGCAATGA
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Coding sequence (CDS) from alignment at tig00000075_pilon:699600..700067+

>Ggra9274.t1 ID=Ggra9274.t1|Name=Ggra9274.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=468bp|location=Sequence derived from alignment at tig00000075_pilon:699600..700067+ (Gracilaria gracilis GNS1m male)
ATGGACAAGCTTTCTGGACTGCTGGGAAAGGCCACGGGCGCCGATCCGGG
AGAAGGCATTGAACAAACCATGAAGGAGAAGGCTGTAGAGGAGCTAATTC
AAGACAAGGTGGAGGACATTGCGGGCAAAAAGGTGGCCGAATCCGAACAG
GTGGAGAACATCGCCGAGAAGATTGCTGATGCCGTCGCAGATAAAGTGCC
TACCTCCATGCTAGGCGCCGGAGCAATGGCGAGCATGAAGGACGATGATA
AGAGTGGATCGGGCTCTGGTATCATGGCACAGGCGTCCAGTTTGTTGGGC
GGTGGTGGAGAACAGAAAAAGAGTGACACCGGTGACTTGATGGGGCAGGC
TGCCAGTTTCCTtggtggtggtggtggtggtggtggtggtgCAGATGATG
ACGAGAAGAAGAAGGGTGGTGCTGAGGATTTGATCGGACAGGCAGCTAGC
TTCCTTGGAAAGCAATGA
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