Ggra9249.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9249.t1
Unique NameGgra9249.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length331
Homology
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A2V3IE23 (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE23_9FLOR)

HSP 1 Score: 369 bits (946), Expect = 1.960e-117
Identity = 190/223 (85.20%), Postives = 205/223 (91.93%), Query Frame = 0
Query:  101 ISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAVREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEGEVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVDLVTGIGMRTPRSARS 323
            ISPFDVDMSYTEHELDFFELR+LLGSV+RGELSARSLA+PPAVREKV DSKRELDHRVRGACE+FILKTTR+ILDPVLMFLAKCNALPA+RSA R LEEGEVPPTPPSAPF + KSN ESFA+  KV+ETWE V+KAVNEEL PVVERMKIYITK ASR+VLLRPIRANVAEAATELLSVLQQRYTLEERE+I VDG  V KLLEDVD VTG+G +TPRS R+
Sbjct:  668 ISPFDVDMSYTEHELDFFELRTLLGSVMRGELSARSLASPPAVREKVIDSKRELDHRVRGACEAFILKTTRMILDPVLMFLAKCNALPANRSASRTLEEGEVPPTPPSAPFETLKSNVESFAHAQKVRETWEKVQKAVNEELEPVVERMKIYITKSASRSVLLRPIRANVAEAATELLSVLQQRYTLEEREEIGVDGELVTKLLEDVDTVTGMGAKTPRSGRA 890          
BLAST of Ggra9249.t1 vs. uniprot
Match: R7Q721 (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q721_CHOCR)

HSP 1 Score: 308 bits (788), Expect = 3.530e-94
Identity = 166/258 (64.34%), Postives = 196/258 (75.97%), Query Frame = 0
Query:   62 CLRLIETVDDALAALIKIEGGHQFVSDIVLQFKSDCEAMISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAVREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRS-AHRVLEEGEVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVDLVTGIGMRTP 318
            C++ + +    +AA+ K          +V Q     E  ISPFDV+MSYTEHELDFFELRSLLGSV+RG+LSARSL APP VR  V DSKRELDHRVRGACESFILKTTRL+LDPVL FLAKCNALP  R  AH  L  G+VP TPP APF+  K+N  SFA+P +++ETW+ V +AV+ EL  +V RMKIYI+K ASRAVLLRPIRAN+AEAATELLS LQ RYTL+ERE I +DG +VGKLL++VD + GI  RTP
Sbjct:  635 CVQSVGSAAARIAAMDKPNAEDHAQLFLVWQLLMTREQ-ISPFDVEMSYTEHELDFFELRSLLGSVMRGQLSARSLTAPPTVRATVVDSKRELDHRVRGACESFILKTTRLLLDPVLSFLAKCNALPVPRKGAHTELGPGQVPATPPKAPFDILKANSGSFAHPKRLRETWQKVNEAVSNELPALVNRMKIYISKAASRAVLLRPIRANIAEAATELLSSLQLRYTLDEREVIGIDGEQVGKLLDEVDSIMGIAARTP 891          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A7S1XET5 (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XET5_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 4.440e-61
Identity = 115/220 (52.27%), Postives = 150/220 (68.18%), Query Frame = 0
Query:  101 ISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAVREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEGEVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVDLVTGIGMRTPRS 320
            ISPFDV+ +YTE E DF E R LLG V+RG+    +L+ PP +R++  DSKR L+  V+ ACE+FILKTTRL LDP+L FLAKCN LP        +E G+V        F S K +  SFA+P+ +++ WE V  A+N EL   V R+ IY+TKP SR+VLLRPIRAN AEAA+EL+S LQ RYTLEERE+I +DG  + K L+ +D + GI  + P+S
Sbjct:  339 ISPFDVEFAYTEKEFDFTETRLLLGRVLRGQAPLLTLSQPPRIRQRTIDSKRLLEQSVQTACEAFILKTTRLFLDPILAFLAKCNVLPVPDR----IEAGDVD----GNSFTSLKQSVGSFAHPSGLRQMWEQVCDAINTELTEAVSRLSIYVTKPTSRSVLLRPIRANFAEAASELISALQTRYTLEEREEIGIDGEAIQKELDSLDEIFGI--KVPQS 548          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A7S1TD42 (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD42_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 5.120e-59
Identity = 115/220 (52.27%), Postives = 150/220 (68.18%), Query Frame = 0
Query:  101 ISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAVREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEGEVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVDLVTGIGMRTPRS 320
            ISPFDV+ +YTE E DF E R LLG V+RG+    +L+ PP +R++  DSKR L+  V+ ACE+FILKTTRL LDP+L FLAKCN LP        +E G+V        F S K +  SFA+P+ +++ WE V  A+N EL   V R+ IY+TKP SR+VLLRPIRAN AEAA+EL+S LQ RYTLEERE+I +DG  + K L+ +D + GI  + P+S
Sbjct:  667 ISPFDVEFAYTEKEFDFTETRLLLGRVLRGQAPLLTLSQPPRIRQRTIDSKRLLEQSVQTACEAFILKTTRLFLDPILAFLAKCNVLPVPDR----IEAGDVD----GNSFTSLKQSVGSFAHPSGLRQMWEQVCDAINTELTEAVSRLSIYVTKPTSRSVLLRPIRANFAEAASELISALQTRYTLEEREEIGIDGEAIQKELDSLDEIFGI--KVPQS 876          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A5J4YL13 (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL13_PORPP)

HSP 1 Score: 209 bits (531), Expect = 3.340e-57
Identity = 113/227 (49.78%), Postives = 150/227 (66.08%), Query Frame = 0
Query:  101 ISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAV-REKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASR----------------SAHRVLEEGEVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVDLV 310
            ISPFDVD +YTE ELDF+ELR LL  V+RG ++ R+LA PPA  +E+V DSKR L+H +R ACE+FILK TRL+LDP+L FLAKCNA+P+                      VL+  E   + P   F  QK +  SFA+PA+V E W  V+  V  +L   V+R+ +YITKP++RAVLLRP+ AN  EA  EL+++LQ RYTLEE+E I +DG+ V  +LE +D +
Sbjct:  737 ISPFDVDFAYTEKELDFYELRQLLTHVLRGHVTFRALAQPPAATKERVVDSKRSLEHELRSACEAFILKETRLVLDPILAFLAKCNAVPSGSRQVADPLTAAPSDEDDGTQDVLQAAEQ--SFPRGSFEQQKLDASSFAHPARVSELWSQVKANVRNKLVSSVQRLHLYITKPSTRAVLLRPLYANCVEACRELVALLQMRYTLEEQEIIGIDGSSVHAVLEQIDRI 961          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A7S3EJ45 (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ45_9RHOD)

HSP 1 Score: 186 bits (471), Expect = 3.100e-49
Identity = 104/222 (46.85%), Postives = 139/222 (62.61%), Query Frame = 0
Query:  102 SPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAV-REKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEGEVPPTPPSAP---------FNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVDLVTGI 313
            +P DV+ ++ + EL+F ELR +LGSVIRG+ S R LA PPA  REKV DS ++LD     ACE+F+L+ TR  LDP+L FLAKCNALPA+R+          P + PS+P         F S K    SF +   +   W++ E  + ++LA VV  +K+YI KP+S  +LL P+RAN  E   ELLS LQ RYTLEERE+I +DG+K+  L+  VD V  I
Sbjct:  635 APLDVNFAFVDRELNFTELRGMLGSVIRGQASVRQLATPPAATREKVVDSSQDLDDAFFKACEAFVLRLTRTFLDPILSFLAKCNALPANRN---------TPLSHPSSPSLKAYDGKTFESMKRTEGSFLHSQSIIAVWKDTEDRIEKDLASVVGDLKLYIKKPSSALILLSPVRANFQETFNELLSALQTRYTLEEREEIGIDGSKIEALMARVDDVMDI 847          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A1X6NIV0 (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIV0_PORUM)

HSP 1 Score: 145 bits (365), Expect = 1.570e-36
Identity = 96/261 (36.78%), Postives = 136/261 (52.11%), Query Frame = 0
Query:   80 EGGHQFVSDIVLQFKSDC-EAMISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAA--PPAVREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEGEVPPTPPSAP-----------------------------FNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKVGKLLEDVD 308
            E G +  + + L ++  C    ++PFDVD  YTE  LDF  LR L+ SV RGE   R+LA    P +     DS+ +L+  VRGA E +IL T RL+L P+L FLA   +     +                                               + + K+ P SFA+PA V  TW  V KA++ +L PVV+R+++Y++  A+ A+LLRP+R  VA+AA ELL+ L +RY+LEERE I VDGA V +LL  +D
Sbjct:  139 EDGSREHARLFLLWQLLCVREQMAPFDVDFGYTERRLDFVRLRELVASVARGEAPVRALARLPGPGLTATTGDSRGDLEAAVRGAAEEWILDTCRLVLRPLLGFLAAVASAGGDDTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALTGYAALKATPGSFAHPASVAATWAAVVKAIDADLPPVVDRLRVYLSSGAAAALLLRPVRRGVADAAAELLAALPRRYSLEEREAIGVDGAAVEELLGRLD 399          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A7S1TJE5 (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TJE5_9RHOD)

HSP 1 Score: 140 bits (354), Expect = 1.730e-36
Identity = 80/210 (38.10%), Postives = 116/210 (55.24%), Query Frame = 0
Query:   56 KEDRKACLRLIETVDDALAALIKIEGGHQFVSDIVLQFKSDCEAMISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPA-VREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPA------------SRSAHRVLEEGEVPPTPPSA----------PFNSQKSNPESFAYPAKVKETWENVEKAVNEEL 242
            +E   AC++ + +    +A  + ++G  +     ++         I+PFDVD SY + ELDF+ELR LLG V+RG +S R+LA PPA ++E++ DSKR+L+  +R ACE FIL  TRL+LDP+L FLAKCNALPA            +R +  +   G+                  PF + K +P SFA P K++ETW  V     E+L
Sbjct:   32 QEAVSACVQALVSASQRIARRVGLDGADEHAQLFLIWQLLMLREQIAPFDVDFSYAQKELDFYELRQLLGHVVRGHVSFRALAQPPAAMKERIVDSKRDLEKELRAACEVFILTKTRLLLDPILAFLAKCNALPAGSRQRNAAQYKGNRDSQALAGNGDGGENXXXXXXXXXXSSLDPFTTLKQSPSSFANPEKLRETWLTVNSGAREQL 241          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A7S0ZHU9 (Conserved oligomeric Golgi complex subunit 3 (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHU9_9RHOD)

HSP 1 Score: 117 bits (294), Expect = 1.090e-28
Identity = 56/91 (61.54%), Postives = 73/91 (80.22%), Query Frame = 0
Query:  101 ISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPA-VREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPAS 190
            ISPFDV+ +Y E ELDF+ELR LLG V+RG +S RSLA PPA ++ +  DSKR+L+  +R  CE+FIL+ TRL+LDP+L FLAKCNALP++
Sbjct:   30 ISPFDVEFAYMEKELDFYELRQLLGQVVRGHVSFRSLAQPPAAMKVRTVDSKRDLEKELRAICETFILRKTRLVLDPILAFLAKCNALPST 120          
BLAST of Ggra9249.t1 vs. uniprot
Match: A0A5N6Q9F5 (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6Q9F5_9ROSI)

HSP 1 Score: 126 bits (316), Expect = 1.940e-28
Identity = 93/312 (29.81%), Postives = 160/312 (51.28%), Query Frame = 0
Query:    1 MNDNDEAMFAYKGEDGLKGLAEVSTAEE----FHIWHDEMERRLEEANEHKYRSL----VDGLKEDR-KACLRLIETVDDALAALIKIEGGHQFVSDIVLQFKSDCEAMISPFDVDMSYTEHELDFFELRSLLGSVIRGELS----------ARSLAAPPAVREKVFDSKRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEGEVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMKIYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDI 293
            M  +++  +  K E  ++  +E STAEE    +  W+  +E+ L   ++  YR L      GL ++  + C   I+     +        G  F+   +L  +      I+PFD++ S T  ELDF  L   L  ++RG+ S          AR+L+  P V E   D+K+EL+  ++  CE FI+  T+L++DP+L F+ K  A+  + S+    ++ E   +  + P   Q     +FA P KV E  + V  AV +EL PV+ +MK+Y+  P++R +L +PI+ N+ EA  ++ S+L+  Y+ EE ++I
Sbjct:  476 MPSDEDLDYPAKLEQSVENKSETSTAEENPDVYKTWYPPLEKTLSCLSK-LYRRLEAAVFTGLAQEAVEVCSISIQKASKLIVKRSSPMDGQLFLIKYLLILREQ----IAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLS--PRVLESQIDAKKELEKSLKATCEEFIMSVTKLVVDPMLSFVTKVTAVKFALSSGNQNQKLE---SVMAKPLKDQ-----AFATPDKVAELVQKVSAAVQQELPPVMAKMKLYLQNPSTRTILFKPIKTNIVEAHVQVQSMLKAEYSPEEIQNI 772          
The following BLAST results are available for this feature:
BLAST of Ggra9249.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IE231.960e-11785.20Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
R7Q7213.530e-9464.34Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S1XET54.440e-6152.27Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S1TD425.120e-5952.27Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A5J4YL133.340e-5749.78Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A7S3EJ453.100e-4946.85Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
A0A1X6NIV01.570e-3636.78Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
A0A7S1TJE51.730e-3638.10Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
A0A7S0ZHU91.090e-2861.54Conserved oligomeric Golgi complex subunit 3 (Frag... [more]
A0A5N6Q9F51.940e-2829.81Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 23..100
coord: 100..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:578809..581462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9249.t1Ggra9249.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 578809..581462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9249.t1 ID=Ggra9249.t1|Name=Ggra9249.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=331bp
MNDNDEAMFAYKGEDGLKGLAEVSTAEEFHIWHDEMERRLEEANEHKYRS
LVDGLKEDRKACLRLIETVDDALAALIKIEGGHQFVSDIVLQFKSDCEAM
ISPFDVDMSYTEHELDFFELRSLLGSVIRGELSARSLAAPPAVREKVFDS
KRELDHRVRGACESFILKTTRLILDPVLMFLAKCNALPASRSAHRVLEEG
EVPPTPPSAPFNSQKSNPESFAYPAKVKETWENVEKAVNEELAPVVERMK
IYITKPASRAVLLRPIRANVAEAATELLSVLQQRYTLEEREDIAVDGAKV
GKLLEDVDLVTGIGMRTPRSARSGSTDLVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3