Ggra9234.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9234.t1
Unique Name	Ggra9234.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	591

Homology

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BLAST of Ggra9234.t1 vs. uniprot
Match: A0A2V3IP62 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP62_9FLOR)

HSP 1 Score: 427 bits (1098), Expect = 3.100e-140
Identity = 259/513 (50.49%), Postives = 345/513 (67.25%), Query Frame = 0

Query:   86 VSASTTLTPANAPASNLPAQSFMPPHAAPPRQPARNAEQPPASHRRAQPTAAHGSADVNALSSLAPSSFLHDLNANMTVVLNLNDPS-TALPPTTAFAPEAQIHTGRALTAVQ---PNVALNAARSEAEPSSPRSYSSSESRDVLDDDSDITQETSYDSLVKQLQQTSPEAFSRALHAVKAADLSADSRNKLMHALENALQTLCIEQTDHVSLPHSNIRIEAYTALASFYATTTCPQNNKVIEYCQLGLDLAAGRERLFPQLVANLHALKARVLVSIGDMSRIQEAISHAKAAQVALYAIRDPKLHYELCVTLGDAYTVLMDGAVCDNIYTAYEWYRAAIELSKMTASESPIKVMWLSCRTAQLILRYLRQKRS-GQNMKENEQHGGKK-----VGATC-----SMSISNLLTIVEQLRIDVEKVREKVRESEMNVSDELRRLESVVFECIGKAYFERART-SSTKVQDLKKAASSMHKALSLSLCEADPCGHRYAGIQEMIDDVQSQLKTAE 582
            +SA+T +TPAN P  +LP +    P A   ++         AS+ R       G+ D N  S+  PSS LHD+NANMTVVLNL++   T  PP   + P+ ++    ALT  +   PN+A +  RS+  PSS RSYS+SES DV ++DSD+T+ETSYD+LVKQLQQTSPEA SR + AVKA DLS D+R+KLM  LE A++  C   +  +S PHSN+ +EA+  LASF+A++  PQ +KVI++CQ GLDL+ GRERLFP LVA LHALKARVLV+  D SRI EAISHAKAAQVALYA  D +L YE+CVTLGDAY    +GA+C N+ +A E YR+AI+LS+M A ESP  VMWLSCR  QL+L +LR  R+ G+    + Q  G       +   C     SMS+  LLT+V QLR+D+EK+R++    +M   ++L++L+S +FEC GKAYFERART  ST+V+DLK+A S M  AL+    + DP G R++ I+E +DD++  L+ AE
Sbjct:    1 MSATTDMTPANVPTPHLPGRII--PVAQHIQESQNQGTDQTASNLRRVAPHVSGNTDANRRSATIPSSMLHDVNANMTVVLNLSEAGQTIYPP---YLPDGRVE--HALTPREVDSPNMASDN-RSDQHPSS-RSYSTSESGDVFEEDSDVTEETSYDTLVKQLQQTSPEAISRTIQAVKAKDLSNDARSKLMIGLEKAIRATCFN-SGTMSRPHSNVHVEAHCVLASFFASSDPPQGDKVIDHCQAGLDLSIGRERLFPNLVATLHALKARVLVNKADPSRISEAISHAKAAQVALYACNDRRLQYEVCVTLGDAYATYKEGAICGNLSSACESYRSAIQLSRMAALESPTNVMWLSCRVVQLMLLFLRHNRAAGRRTPSSSQRSGSDPCQDHISEACGIQPSSMSLHELLTLVGQLRLDMEKLRDE----DMEEPEKLQQLDSCIFECTGKAYFERARTWPSTRVKDLKRAMSEMQHALNSCSWKHDPAGQRHSAIREAVDDIRIVLQQAE 499

The following BLAST results are available for this feature:

BLAST of Ggra9234.t1 vs. uniprot

BLAST of Ggra9234.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IP62	3.100e-140	50.49	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 478..512
None	No IPR available	COILS	Coil	Coil	coord: 564..584
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000075_pilon	contig	tig00000075_pilon:445358..447193 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9234.t1	Ggra9234.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000075_pilon 445358..447193 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9234.t1 ID=Ggra9234.t1|Name=Ggra9234.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=591bp
MSAFSFRRRLNRGASSSAKLASSSSPPPPQPPPAHACACNELLAHRPLRV
FCIPCVFVVPPVQCHCAPPLNHPVPESSAAAAPLHVSASTTLTPANAPAS
NLPAQSFMPPHAAPPRQPARNAEQPPASHRRAQPTAAHGSADVNALSSLA
PSSFLHDLNANMTVVLNLNDPSTALPPTTAFAPEAQIHTGRALTAVQPNV
ALNAARSEAEPSSPRSYSSSESRDVLDDDSDITQETSYDSLVKQLQQTSP
EAFSRALHAVKAADLSADSRNKLMHALENALQTLCIEQTDHVSLPHSNIR
IEAYTALASFYATTTCPQNNKVIEYCQLGLDLAAGRERLFPQLVANLHAL
KARVLVSIGDMSRIQEAISHAKAAQVALYAIRDPKLHYELCVTLGDAYTV
LMDGAVCDNIYTAYEWYRAAIELSKMTASESPIKVMWLSCRTAQLILRYL
RQKRSGQNMKENEQHGGKKVGATCSMSISNLLTIVEQLRIDVEKVREKVR
ESEMNVSDELRRLESVVFECIGKAYFERARTSSTKVQDLKKAASSMHKAL
SLSLCEADPCGHRYAGIQEMIDDVQSQLKTAEASNQMKRR*