Ggra9270.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9270.t1
Unique NameGgra9270.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length702
Homology
BLAST of Ggra9270.t1 vs. uniprot
Match: A0A2V3IKJ5 (Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKJ5_9FLOR)

HSP 1 Score: 723 bits (1866), Expect = 5.110e-253
Identity = 345/525 (65.71%), Postives = 417/525 (79.43%), Query Frame = 0
Query:  178 DPMRHLEAHFRETERALRHPLLWLRHLRDHHPDARVETRRTACREFDAGAQTCVFEGFACVNVSAQLPFG-RPLVYFVHDAQPDHAVVPNDRWCSLRHQSSDPRYFSSRHWPILNNTVAPQRSCLDARYRTSQSLLSSRFDEHNASDGQLPDTQRMRIKWLPSIWLSDLDYFNNNHNNHLVKDILWMLDLSLWQQSLSVTSSPAHNLPLNL-TSSLFESQGTHLYMPQGMEDFERQTSRDVNRLNYALILQQNISKLYANRSDHDMKQNSSEKRTTQTLFQAYPELLQDDKLLFHRDELNASSHDLVCTARLTVGAKIGNGAHERVCRSLRQRAHEFYGIEPNAMKRLGHIYFPQPPKRIVILQRHVTRRIGNVQQLHAAIKKEFEPSGVQVELWSTEQVQTAEQYVRVFSRAGVVLTPHGSQSMGQIYMARHSALIEVMPVGYTDYAFNLLSESCKIWYYELQSVRPPSKTEQWYEERCGKLQPHMLNPCTAVKSVDVWVDVAAALRTLKLALERLGYAVGPWM 700
            DP+ HL  H R+  +A  HP LW   L+ HH +  V+TRRTACREFDAGAQTCVFEGFACVNVS+ +    RPL+YFV DA+ D+  V +D+WCSLRHQSSDPRYFSSRHWPILN+TVAPQRSCL A+YRT  SLL  R       +G LP     RIKW+ SIWLSDLDY +NNHNNHL+KDI+WMLD+SLWQ SLS++ SP HN+PL   T+ LFE+   H+Y+PQ   DFERQT+RDVNRLNYAL+LQ+++S LY N +   ++Q     R TQ LF+AYPELLQ+D LLFHRD    S +DLVCT RLTVGAKIGNGAHERVCRSLRQRAH+FYG+E N MKRLG  ++PQPPKRIV+LQRHVTRR  N+ QL  A++ +F   G+ V+L ST+Q+QTAEQ+VRVFS AGV++TPHGSQ+MGQIYM RHSA+IEVMPVGYTDYAFNLLSESCKIWYYELQS+R P+K  +WYEE+CG+  PHM++PC  +KSVDVWV++ +A+RT+K A ER+GY + PWM
Sbjct:  132 DPLLHLVLHERQRLQAQSHPSLWALFLQQHHQNRSVQTRRTACREFDAGAQTCVFEGFACVNVSSVVTQSDRPLIYFVDDAKRDYEPVTSDQWCSLRHQSSDPRYFSSRHWPILNHTVAPQRSCLTAQYRTFNSLLHRRLTL--LQNGSLPSEAATRIKWVSSIWLSDLDYHDNNHNNHLLKDIIWMLDISLWQTSLSLSVSPVHNIPLTFSTNGLFETTPQHIYLPQSQTDFERQTARDVNRLNYALVLQKDLSHLYPNLTSSQIRQPGQHARPTQPLFKAYPELLQNDSLLFHRDLKADSQYDLVCTPRLTVGAKIGNGAHERVCRSLRQRAHQFYGVEHNQMKRLGSTFYPQPPKRIVVLQRHVTRRFANLNQLLNALRSQFGLKGIDVQLVSTKQLQTAEQFVRVFSSAGVLITPHGSQAMGQIYMPRHSAIIEVMPVGYTDYAFNLLSESCKIWYYELQSMRLPNKPAEWYEEKCGRHTPHMMSPCNDIKSVDVWVNITSAVRTIKFAFERMGYPIDPWM 654          
BLAST of Ggra9270.t1 vs. uniprot
Match: A0A2V3ILS5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILS5_9FLOR)

HSP 1 Score: 598 bits (1543), Expect = 1.610e-205
Identity = 291/518 (56.18%), Postives = 373/518 (72.01%), Query Frame = 0
Query:  183 LEAHFRETERALRHPLLWLRHLRDHHPDARVETRRTACREFDAGAQTCVFEGFACVNVSAQLPFGRPLVYFVHDAQPDHAVVPNDRWCSLRHQSSDPRYFSSRHWPILNNTVAPQRSCLDARYRTSQSLLSSRFDEHNASDGQLPDTQRMRIKWLPSIWLSDLDYFNNNHNNHLVKDILWMLDLSLWQQSLSVTSSPAHNLPLNLTSSLFESQGTHLYMPQGMEDFERQTSRDVNRLNYALILQQNISKLYANRSDHDMKQNSSEKRTTQTLFQAYPELLQDDKLLFHRDELNASSHDLVCTARLTVGAKIGNGAHERVCRSLRQRAHEFYGIEPNAMKRLGHIYFPQPPKRIVILQRHVTRRIGNVQQLHAAIKKEFEPSGVQVELWSTEQVQTAEQYVRVFSRAGVVLTPHGSQSMGQIYMARHSALIEVMPVGYTDYAFNLLSESCKIWYYELQSVRPPSKTEQWYEERCGKLQPHMLNPCTAVKSVDVWVDVAAALRTLKLALERLGYAVGPWM 700
            L+AHF E  R+L  P  WL HLR H  +A V T RTACREF  GAQTCVF+GF C NV+++ P GRP    + D +PD   + +D WC  RH +SDPRYFS+R WP+ N+T +PQR+C  A YR S  L SS     N S           ++W PS+ L DLDY NNNHNNHL+K+++W+LDL L++ SLS+  SPA +  L   +S F+    H+Y+PQ   DFE QT RDVNRLNYALIL++N+S LY + +   MKQ+S++ R T+ L +AYPEL Q  +LLFH D +N S  +LVCTA+LTVGAKIGNGAHERVCR LRQRAH+F+GI  N  KR+G +YFPQPPKR+V+ QRH TR I N+ ++  A++  FE  GV V++  T+ V TAEQ+VR FS  GV++TPHGSQSMGQIYM RHSALIE+MPVGYTDYAFNLL+ESCKIWYYE+QS++P +KTE++Y+E+CGK  PH  NPC  VK+++V V+V   + T++ ALER+GY   PWM
Sbjct:   60 LDAHFLERTRSLSDPRAWLDHLRRHDANATVRTVRTACREFKEGAQTCVFDGFVCANVTSEQPLGRPHFLLIDDHKPDAHRLRSDSWCQRRHITSDPRYFSARDWPLRNDTESPQRTCFSATYRNSSFLYSS----FNLSS----------VQWYPSLSLVDLDYVNNNHNNHLIKEVIWLLDLYLFETSLSLNPSPADHSSLRSFTSPFQRTFEHIYLPQSRRDFEIQTGRDVNRLNYALILRKNLSNLYPSYTSAQMKQSSTQPRHTEPLLKAYPELTQQSQLLFHHDFINNSQVNLVCTAKLTVGAKIGNGAHERVCRYLRQRAHQFFGISRNP-KRVGRVYFPQPPKRVVVYQRHRTRSIENLDEVEHALRNSFEKYGVAVDVVYTDAVATAEQHVRFFSDVGVLITPHGSQSMGQIYMPRHSALIEIMPVGYTDYAFNLLAESCKIWYYEIQSMKPANKTEEYYKEKCGKKTPHFFNPCAEVKNINVVVNVTRLVDTVRTALERMGYETIPWM 562          
BLAST of Ggra9270.t1 vs. uniprot
Match: A0A2V3IXI5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXI5_9FLOR)

HSP 1 Score: 575 bits (1482), Expect = 2.570e-196
Identity = 274/512 (53.52%), Postives = 358/512 (69.92%), Query Frame = 0
Query:  196 HPLLWLRHLRDHHPDARVETRRTACREFDAGAQTCVFEGFACVNVSAQLPFGRPLVYFVHDAQPDHAVVPNDRWCSLRHQSSDPRYFSSRHWPILNNTVAPQRSCLDARYRTSQSLLSSRFDEHNASDGQLPDTQ-----RMRIKWLPS-IWLSDLDYFNNNHNNHLVKDILWMLDLSLWQQSLSVTSSPAHNLPLNLTSSLFESQGTHLYMPQGMEDFERQTSRDVNRLNYALILQQNISKLYANRSDHDMKQNSSEKRTTQTLFQAYPELLQDDKLLFHRDELNASSHDLVCTARLTVGAKIGNGAHERVCRSLRQRAHEFYGIEPNAMKRLGHIYFPQPPKRIVILQRHVTRRIGNVQQLHAAIKKEFEPSGVQVELWSTEQVQTAEQYVRVFSRAGVVLTPHGSQSMGQIYMARHSALIEVMPVGYTDYAFNLLSESCKIWYYELQSVRPPSKTEQWYEERCGKLQPHMLNPCTAVKSVDVWVDVAAALRTLKLALERLGYAVGPWMR 701
            HP LWL HLR  H D  V+T RTACRE+ A AQ+C F GF CVN S Q+PF RP VY V D+  D   VP+D WCS R QS+DPRY+  RHWP+LN+TV PQ+SC++A YRTS SLLS+R          + D+      R R+ WL S +WL DLDY NN+HN HL+ DI WMLD+ LWQ+S+ + ++ +   P      +F     H+Y+PQG+EDF  QTSRD+NRLNYAL LQ N++ LY   S   +  N+ +KR  +TL +AYP L ++ +LLFHR+   +S  DLVCT+ L  GAK+ +  HERVCRS+RQRAH  +GI+   + R+G I++P+PP++I++L RH+TR IGN+Q+L   ++  FE    +VE+ ST ++QTAE +VR+FS+AGV+LTPHGSQSMG IYM RHSALIEVMPVG  DY FN+++ESCK+WYYELQS   P  T+  Y+ RC    PHMLNPC A K+  VWVD+  A++T+ LALERLGY  GPW+R
Sbjct:   55 HPALWLNHLRSLHADHIVKTVRTACREYQALAQSCQFNGFICVNTSHQIPFDRPQVYLVDDSYEDFTPVPSDNWCSFRFQSADPRYYGPRHWPLLNHTVVPQQSCMNAFYRTSASLLSARLAAEPILRSSIHDSPLLLLPRARMLWLSSPLWLVDLDYVNNSHNMHLLMDIAWMLDVELWQRSIQLHNTQSRGTPSPSVQGVFSVPRRHVYLPQGIEDFGVQTSRDINRLNYALTLQLNLNALYPTLSAAQLSHNTKQKRWAETLLKAYPNLTKNHQLLFHRELYESSEVDLVCTSSLVSGAKLASLGHERVCRSMRQRAHALFGIQEPDLVRVGQIFYPRPPRKIIVLDRHITRGIGNIQELERQLRAFFERKRFEVEIVSTARIQTAEDHVRLFSKAGVLLTPHGSQSMGMIYMPRHSALIEVMPVGCVDYLFNVMAESCKVWYYELQSRMDPGTTDAAYKARCEDHTPHMLNPCGAFKNEQVWVDIPEAIKTITLALERLGYVTGPWLR 566          
BLAST of Ggra9270.t1 vs. uniprot
Match: R7QMN8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMN8_CHOCR)

HSP 1 Score: 230 bits (586), Expect = 1.810e-60
Identity = 113/217 (52.07%), Postives = 155/217 (71.43%), Query Frame = 0
Query:  392 FESQGTHLYMPQGMEDFERQTSRDVNRLNYALILQQNISKLYANRSDHDMKQNSSEKRTTQTLFQAYPELLQDDKLLFHRDELNASSHDLVCTARLTVGAKIGNGAHERVCRSLRQRAHEFYGIEPNAMKRLGHIYFPQPPKRIVILQRHVTRRIGNVQQLHAAIKKEFEPSGVQVELWSTEQVQTAEQYVRVFSRAGVVLTPHGSQSMGQIYMARH 608
            F     H+Y+PQG  DF  QTSRDVNRL YALIL+ +  +LY N +  ++   S+E+     LF+A+PEL   ++L+F R+  +    DLVCT R T GAK+ NGAHERV R LRQ A++ YG++     R+G   FPQPPKRIV+LQRHVTR + N+ +L  A++++FE  GV+VE+ ST+++ TAE +VR+F+RAGV++TPHGSQSMGQI+M RH
Sbjct:  430 FSEGARHVYLPQGSADFVAQTSRDVNRLTYALILRLDPGRLYPNVTREELHAGSTEREAA-PLFEAFPELRAGERLVFRREMRDDEETDLVCTPRFTAGAKLSNGAHERVYRHLRQEAYKRYGVQEPDFARVGQTAFPQPPKRIVVLQRHVTRPLENIDELETALREKFEGDGVEVEVVSTDKLNTAEDFVRIFARAGVLITPHGSQSMGQIWMPRH 645          
The following BLAST results are available for this feature:
BLAST of Ggra9270.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IKJ55.110e-25365.71Protein O-linked-mannose beta-1,4-N-acetylglucosam... [more]
A0A2V3ILS51.610e-20556.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXI52.570e-19653.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QMN81.810e-6052.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007657Glycosyltransferase 61PFAMPF04577Glyco_transf_61coord: 499..612
e-value: 3.1E-11
score: 43.5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..701
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 103..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:665102..667358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9270.t1Ggra9270.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 665102..667358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9270.t1 ID=Ggra9270.t1|Name=Ggra9270.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=702bp
MDPKDCLPLLYWCFTWHFIQASVPLSFLNYGNTAVRQKLHGVFEMIFELN
WGFITKVDIVYLCTTIPLVAFPLQQPAVLRHTAVATMTPPALELKLPTVR
SRLVSLSLVALLVVAFTASLLYVATSISALQLRLHSHICQQDDPDDPLCQ
SRVAPPPVAAFSALADDDDDERLLHHHDPMRHLEAHFRETERALRHPLLW
LRHLRDHHPDARVETRRTACREFDAGAQTCVFEGFACVNVSAQLPFGRPL
VYFVHDAQPDHAVVPNDRWCSLRHQSSDPRYFSSRHWPILNNTVAPQRSC
LDARYRTSQSLLSSRFDEHNASDGQLPDTQRMRIKWLPSIWLSDLDYFNN
NHNNHLVKDILWMLDLSLWQQSLSVTSSPAHNLPLNLTSSLFESQGTHLY
MPQGMEDFERQTSRDVNRLNYALILQQNISKLYANRSDHDMKQNSSEKRT
TQTLFQAYPELLQDDKLLFHRDELNASSHDLVCTARLTVGAKIGNGAHER
VCRSLRQRAHEFYGIEPNAMKRLGHIYFPQPPKRIVILQRHVTRRIGNVQ
QLHAAIKKEFEPSGVQVELWSTEQVQTAEQYVRVFSRAGVVLTPHGSQSM
GQIYMARHSALIEVMPVGYTDYAFNLLSESCKIWYYELQSVRPPSKTEQW
YEERCGKLQPHMLNPCTAVKSVDVWVDVAAALRTLKLALERLGYAVGPWM
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007657Glycosyltransferase_61