Ggra9197.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9197.t1
Unique NameGgra9197.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length437
Homology
BLAST of Ggra9197.t1 vs. uniprot
Match: A0A2V3IRZ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ0_9FLOR)

HSP 1 Score: 204 bits (520), Expect = 3.130e-57
Identity = 179/491 (36.46%), Postives = 242/491 (49.29%), Query Frame = 0
Query:    1 MSKTRQQISKRKRRLRRIQRXXXXXXRRQQHAQLVAAGAARQARQKAVQNWLQEEKRREKRTSNRLESPN----KPRVRFADNVYVTEIPNVPAHSLPKPVSSPTGVRLVREREEQQARDIAKLGLHDAMPFSLLCAPDDDYDEDDDPDFVPDVLAEHINIQLPVLTRPKRRLIPHSVPVSNSSDSEPSKRHKKAFPNASPASTPPKPSQRQNKSPKQSTEHSNNASSTK-----------ANAVGQS-------------------------------SERKRTLSQMLSTQDATSADTSQDAVDRPPSSVKASDSPRRRKKKRRKLSNVAQTDQGATHQPLSPK-----PAESNASXXXXXXXXXXSQN-GPNSPKVNSALVEDHVGKQNGTLSNDDNNDSDIDAMFGHMVRRKAQVKAEQRNRKKAENPNGEKPVSAGDK---RKSQKRKGPTRYTEEGFRIMSYDDIKADQPAGLNGDCPFDCSCCF 436
            MSKTR QISKRKRR+RR+QR      +R+  AQ +AAG A+++RQ+AVQ WL++EKR  KR      SP+    KPRVRFA+NV V EIP  P H LPKP SSP GVRL R+ ++ ++ +   +     + F+L  + +D+YDE +DPDF+P    E   +    +T PKRR+I   VP+ NS+ S   K  + +  N SP  T    S    K+ K  T  + +   T+           A+  G S                               ++++ TL  +             DAV                     KL N   + Q    + +SPK     P +  AS           +N   NSP   S L E   G  NG   + D  DS+ID MFG +VR+KAQ K E+  R      + + P     K    + Q++KGPTRYTEEGFRIM+YD+IKADQP GLNG+CPFDCSCC+
Sbjct:    6 MSKTRLQISKRKRRIRRLQRRRIQKAQREHQAQFLAAGKAKESRQRAVQKWLEDEKRLAKRRETSSRSPSTPKRKPRVRFAENVSVAEIPTKPQHKLPKPTSSPIGVRLARDDDDNESPNRHLVRNATTLRFALFSS-EDNYDESNDPDFIPGTEEEGEELNPLPMTTPKRRIIAVPVPLENSASSGRQKILQASASNTSPRLTDRSQSHASPKAGKPKTIRAKSPIKTEFPEQCEPCTVDASPNGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDKRVTLPNV------------NDAVPXXXXXXXXXXXXXX------KLLNGQHSAQAGPTKLISPKKNDKDPDQKIASISKSLSGDEAKRNVKQNSP---SGLGERSEG--NGVDHSTDREDSEIDTMFGELVRQKAQKKLEKGRRVNLREDSIKSPKKQASKTEINRPQQKKGPTRYTEEGFRIMTYDEIKADQPLGLNGECPFDCSCCY 472          
BLAST of Ggra9197.t1 vs. uniprot
Match: R7QJV1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJV1_CHOCR)

HSP 1 Score: 85.1 bits (209), Expect = 1.030e-14
Identity = 61/179 (34.08%), Postives = 92/179 (51.40%), Query Frame = 0
Query:  272 PRRRKKKRRKLSNVAQTDQGATHQPLSP-----KPAESNASXXXXXXXXXXSQNGPNSPKVNSALVEDH------VGKQNG--TLSNDDNNDSDIDAMFGHMVRRKAQVKAEQRNRKKAENPNGEKPVSAGDKRKSQKRKG-PTRYTEEGFRIMSYDDIKADQPAGLNGDCPFDCSCCF 436
            PR +KKKR+     A  D  + ++  +P      P  +  +            + P SP   S  +E        V   NG    S+D +++ +ID +F  +V+++A  KA Q  +++ E      P   G   K++K +G P RYT++G RI+SYDDI ADQP GLNG CPF+CSCC+
Sbjct:  137 PRAKKKKRKTSHTQAALDSPSPNKQTTPVQATASPEVNGTASQGLNQKKRKRPHIPASPSKGSRSMESPKKLLRVVANGNGPKATSSDSDDEEEIDDLFDDLVKQRAANKATQLAQRQKEQQAKPSPKKNG---KTKKHQGLPARYTDDGLRILSYDDIAADQPKGLNGACPFECSCCY 312          
BLAST of Ggra9197.t1 vs. uniprot
Match: A0A5J4YTE3 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTE3_PORPP)

HSP 1 Score: 71.2 bits (173), Expect = 1.940e-10
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:  399 GPTRYTEEGFRIMSYDDIKADQPAGLNGDCPFDCSCCF 436
            GP RYT+EG+R+ +YD+I ADQP GLNG CP+DCSCCF
Sbjct:  199 GPARYTDEGYRVWTYDEIAADQPEGLNGPCPWDCSCCF 236          
BLAST of Ggra9197.t1 vs. uniprot
Match: A0A7S3A2X9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2X9_9RHOD)

HSP 1 Score: 68.6 bits (166), Expect = 1.160e-9
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = 0
Query:  402 RYTEEGFRIMSYDDIKADQPAGLNGDCPFDCSCCF 436
            RYTE+G RI +YDD+K DQP GLNG CPFDCSCCF
Sbjct:  180 RYTEDGLRIYTYDDLKRDQPEGLNGPCPFDCSCCF 214          
The following BLAST results are available for this feature:
BLAST of Ggra9197.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IRZ03.130e-5736.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJV11.030e-1434.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YTE31.940e-1071.05Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3A2X91.160e-977.14Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 41..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 32..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..436
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..45
IPR013885Protein of unknown function DUF1764, eukaryoticPFAMPF08576DUF1764coord: 346..436
e-value: 5.1E-14
score: 53.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:361243..362553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9197.t1Ggra9197.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 361243..362553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9197.t1 ID=Ggra9197.t1|Name=Ggra9197.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=437bp
MSKTRQQISKRKRRLRRIQRRRLQKVRRQQHAQLVAAGAARQARQKAVQN
WLQEEKRREKRTSNRLESPNKPRVRFADNVYVTEIPNVPAHSLPKPVSSP
TGVRLVREREEQQARDIAKLGLHDAMPFSLLCAPDDDYDEDDDPDFVPDV
LAEHINIQLPVLTRPKRRLIPHSVPVSNSSDSEPSKRHKKAFPNASPAST
PPKPSQRQNKSPKQSTEHSNNASSTKANAVGQSSERKRTLSQMLSTQDAT
SADTSQDAVDRPPSSVKASDSPRRRKKKRRKLSNVAQTDQGATHQPLSPK
PAESNASPKKAQPAASPSQNGPNSPKVNSALVEDHVGKQNGTLSNDDNND
SDIDAMFGHMVRRKAQVKAEQRNRKKAENPNGEKPVSAGDKRKSQKRKGP
TRYTEEGFRIMSYDDIKADQPAGLNGDCPFDCSCCF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013885DUF1764_euk