Ggra9175.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9175.t1
Unique NameGgra9175.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length706
Homology
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A2V3IPA9 (DNA topoisomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPA9_9FLOR)

HSP 1 Score: 1059 bits (2739), Expect = 0.000e+0
Identity = 507/630 (80.48%), Postives = 569/630 (90.32%), Query Frame = 0
Query:    1 MALRILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALTDMDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCRVPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLWPRSGPQDDGAHPPIHPTQGAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFSEVVST 630
            M LRILNVAEKPSAAKEI  VLKG Q A SR G+SRYNPIYEFNMS+QG  SLM+FTSVTGHIK+TDFE RYRKWGSCDPS+LL+P+QT VEW+++E+++PLA TLR EARRADWL+LWLDCDSEGERIA DVADICKE K +++VKRARFSAMTRGDL RA+NQL +P+ERVA+MVATRQE+DLRAGSAYTR+LTKQLEKY+LTD + Q+ISYGPCQFPTLGLVVDRWL IQNFVSRPFWVFEL L+DC VPLEWFRKQLFDEY+AM LYELCAEEA+ADGNV TVKR DKR+KTRWRPLPLSTVELQKV++RSLRINSHRTMEIAE+LYNKGLISYPRTETNRFSRTYDLK  IQK   H TWG FAERLLSP  + DP+TF WPR+GP DDGAHPPIHPT  AP  FDS DH RVY+YI KRFLA+CSIDAVGSETR+DVLVGSAE FTA+GLIVEQKGYLEVL+P+E+W DK+MP+SLL++++ +P ESFTFRRSQT PPPLLQEADLIALMDHHGIGTDATIAEHIRKV DR YVEK+ QGRFSPTEIGKALVIAHEQC+IHLARPHMRAKQENELKRIL+GE++ ++VL SAL+EYR KL YLK RR VLH+VFS+HF++V  T
Sbjct:    1 MVLRILNVAEKPSAAKEITGVLKGNQAATSRQGQSRYNPIYEFNMSVQGHSSLMVFTSVTGHIKSTDFEARYRKWGSCDPSELLIPTQTAVEWFITEDKQPLARTLRAEARRADWLVLWLDCDSEGERIAWDVADICKEVKPTIVVKRARFSAMTRGDLLRAINQLTIPDERVAQMVATRQELDLRAGSAYTRYLTKQLEKYSLTDTENQIISYGPCQFPTLGLVVDRWLTIQNFVSRPFWVFELKLRDCEVPLEWFRKQLFDEYTAMALYELCAEEAEADGNVVTVKRADKRIKTRWRPLPLSTVELQKVSSRSLRINSHRTMEIAESLYNKGLISYPRTETNRFSRTYDLKDFIQKQTGHPTWGQFAERLLSPPNHNDPVTFNWPRTGPHDDGAHPPIHPTHEAPPVFDSPDHQRVYEYIAKRFLASCSIDAVGSETRSDVLVGSAEIFTARGLIVEQKGYLEVLHPYEKWNDKEMPISLLDVNSQLPFESFTFRRSQTIPPPLLQEADLIALMDHHGIGTDATIAEHIRKVLDREYVEKVMQGRFSPTEIGKALVIAHEQCEIHLARPHMRAKQENELKRILSGEVQPSEVLCSALDEYRTKLDYLKNRRNVLHSVFSQHFAQVTPT 630          
BLAST of Ggra9175.t1 vs. uniprot
Match: R7Q6W3 (DNA topoisomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6W3_CHOCR)

HSP 1 Score: 912 bits (2356), Expect = 0.000e+0
Identity = 435/630 (69.05%), Postives = 526/630 (83.49%), Query Frame = 0
Query:    1 MALRILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALT-DMDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCRVPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLWPRSGPQDDGAHPPIHPTQGAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFSEVVS 629
            M LR+LNVAEKPSAAKEI NVLK GQ  ++R G SR+N IY+F+M+L G  + M FTSV GH+K TDFEDR RKWGSCDP  LL  S+T+VEW+V E+++P+AETLR E+RRADWL+LWLDCDSEGE+IA DVAD+CK+ K S++V+RARFSAMT GDLFRAV QL  PNERVA+MV+TRQEIDLRAGSAYTRFLT QLEK++L  D ++Q++SYGPCQFPTLGLVVDRWL+IQNFV RPFWVF+L +KDC+V  +W RK LFDEY++M LYELC EEA+ DG + +V RVDKR+K RWRPLPLSTVELQKVA+RSLRI+SHR ME+AE+LYNKGLISYPRTET+RF ++Y+L+ L+ K V H  WG FA RLLSP + +D L F WPRSG  DDGAHPPIHPT  AP  F+STDH ++Y+YITKRFLA CSI+A  SETR +V  G++E+FTA+GLI+E+KGYLEV+YPFE+WTDKDMP++LL ++A + I+S   R+SQTQPPPLLQE+DLIALMDHHGIGTDATIAEHI+KV DR YVEK+  G FSPT+IG+ALVIAHEQCQ+HLARP MRAKQE +LK+IL  E+E A VL +AL EY++K  +L+  R VL TVFS  F  V +
Sbjct:    1 MVLRVLNVAEKPSAAKEIANVLKAGQQCETRPGLSRFNQIYDFDMNLAGNRARMSFTSVLGHLKGTDFEDRVRKWGSCDPVDLLDRSRTKVEWFVPEDKQPIAETLRRESRRADWLVLWLDCDSEGEKIAFDVADVCKQGKPSIVVRRARFSAMTHGDLFRAVAQLGEPNERVAQMVSTRQEIDLRAGSAYTRFLTIQLEKFSLVGDDERQIVSYGPCQFPTLGLVVDRWLKIQNFVRRPFWVFDLFVKDCKVQFDWARKHLFDEYTSMALYELCIEEAEQDGMMVSVTRVDKRMKNRWRPLPLSTVELQKVASRSLRISSHRAMEVAESLYNKGLISYPRTETDRFDKSYNLRDLVGKQVGHLDWGPFASRLLSPPSEEDALAFTWPRSGSNDDGAHPPIHPTDVAPARFESTDHQKIYEYITKRFLAACSIEARASETRVEVRAGTSEFFTARGLIIEEKGYLEVMYPFEKWTDKDMPVALLHVNAKLLIDSLMLRQSQTQPPPLLQESDLIALMDHHGIGTDATIAEHIKKVLDRSYVEKVRGGGFSPTQIGQALVIAHEQCQLHLARPDMRAKQERQLKQILTSEMEPADVLTNALSEYQSKFRHLRQNRDVLDTVFSERFQAVTA 630          
BLAST of Ggra9175.t1 vs. uniprot
Match: DNA topoisomerase 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5585 (DNA topoisomerase 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5585)

HSP 1 Score: 693 bits (1789), Expect = 4.620e-239
Identity = 347/576 (60.24%), Postives = 428/576 (74.31%), Query Frame = 0
Query:   54 MIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALTDM--DKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCRVPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLWPRSGPQDDGAHPPIHPTQGAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFSEV 627
            ++FTSVTGH+K++DFEDR+RKWGSCDPS LL P+ ++V W+V EE+R + + LR EARRA  L+LWLDCDSEGE+IA DVAD+CK A R+L+VKRARFSAMT  +L  A++ L   + R+  MVATRQEIDLRAG+AYTRFLT+ + K+ ++    D ++ISYGPCQFPTLGLVVDRWL I++FV R FWV +L L+ C V  EW R +LFD+YSA TLYELC ++  A GN A VK V KR + R+RP+PLSTVELQK A+R LRI+S RTME AE LY  GLISYPRTET+ FS +Y+L+ LI  H ++ TWGSFA RLL+P+T  DPLTF WPRSG  DD AHPPIHPT G P  F   D  RV+ YIT+RFLA+CSIDA G+ET+  V VG AE F A+GLIVE +GYLE++ P+E+W D+ MP  LL   A + IE  T R SQT PPPLL EADLIALMD HGIGTDATIAEHI+KVQDR YV KL+  RF P+++G ALV A E+CQI LARP MR+ QE   K+I  GE +AA V   AL ++ +    L++   +L   F+  F  V
Sbjct:    1 LVFTSVTGHLKSSDFEDRHRKWGSCDPSVLLDPTCSQVTWFVPEEKRTVEQNLRQEARRAHTLVLWLDCDSEGEKIAQDVADVCKSANRNLVVKRARFSAMTGPELMHALHNLVNLDARMVAMVATRQEIDLRAGAAYTRFLTQVVGKFEISSDPDDSRLISYGPCQFPTLGLVVDRWLTIEHFVRRLFWVIDLKLRACDVQFEWARTRLFDQYSAHTLYELCVDDCAALGNQAQVKHVTKRTRDRYRPMPLSTVELQKAASRVLRISSDRTMEAAEKLYTAGLISYPRTETDSFSSSYELQSLISIHASNPTWGSFASRLLTPATTDDPLTFQWPRSGSNDDHAHPPIHPTGGEPPCFPDDDQRRVFAYITRRFLASCSIDARGAETQVQVRVGRAEVFGARGLIVEIQGYLEIMQPYERWADRSMPHELLNQGANVGIEQLTLRESQTSPPPLLAEADLIALMDRHGIGTDATIAEHIKKVQDRNYVRKLSDSRFEPSQLGIALVEALERCQIQLARPGMRSAQEISFKKIPTGERDAAHVKAEALSQFSSTFHRLRSCSQILDAAFAIRFQVV 576          
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A1X6NQS1 (DNA topoisomerase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQS1_PORUM)

HSP 1 Score: 592 bits (1527), Expect = 6.070e-195
Identity = 323/659 (49.01%), Postives = 430/659 (65.25%), Query Frame = 0
Query:    4 RILNVAEKPSAAKEIMN-VLKGG-QPAQSRHGRSRYNPIYEFNM-----SLQGRPS---LMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALTD-----MDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCR-----VPLEWFRKQLFDEYSAMTLYELCAEEAQADGNV----ATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLS-----------PSTNQDPLTFLWPRSGPQDDGAHPPIHPTQGAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKL--AQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFS 625
            R+L VAEKPSAA+++++ V +GG   A+ R G+S+YN ++EF       S+   P+    ++FTSVTGH+   +FE RYR WGSCDPS LL  +Q+ +E    EE+ PL  TL+ EAR    L+LWLD DSEGE+IA DVA + ++ + ++ V+RARFSA+T  ++   +  LDV N RV  MVA RQEIDLR+G+A+TR LT+++ K   +D      D +V+SYGPCQFPTLGLVVDR+L I+NF+  PF+V +L L         VP  W R ++FD+Y A  LYE C E+A ++       A V  V K  + RW+PLPL+TVELQK A+R L ++SH  MEIAE LY  G ISYPRTET++FSR+ DL+ L+ +  +H  WG FA RLL+           P    D + F WPR GP DD AHPPIHPT+ AP    S + ARVY+Y+ +RFLA+CS+DA+G+ET  +  +G  E FTAKGLIVE +G+LEV +P+++W D +MP    ++     + S   R S T+PPPLL E+DLI+LMD HGIGTDATIAEH++KVQDR YV KL  A GRF P  +G ALV   E   +HLARP  RA+QE  +KRI +GE+  A ++  AL  Y A    L+T  A +    S H S
Sbjct:    5 RVLCVAEKPSAARQLVDAVCQGGVNSARRRPGQSQYNHVFEFETAAPIASISPSPTERVTLVFTSVTGHLFEQEFEARYRSWGSCDPSLLLDRTQSAIEVGPPEEKMPLVRTLQDEARNCMALVLWLDGDSEGEKIAADVASVVRQTRPTINVRRARFSAITTAEILHTLAHLDVLNTRVVEMVAARQEIDLRSGAAFTRLLTRRI-KNRFSDNRADASDAKVVSYGPCQFPTLGLVVDRFLTIRNFIRVPFFVIDLGLAAVAPATGVVPFSWARGRVFDQYVASVLYEACVEDAVSESPDGVPRAVVTGVRKNQRRRWKPLPLATVELQKEASRKLHLSSHLVMEIAEKLYTSGFISYPRTETDKFSRSIDLRALVAEQSSHGEWGGFAARLLANENRPGLGPGPPPDGYDIVQFDWPRDGPHDDAAHPPIHPTKVAPHGSLSGNEARVYEYVARRFLASCSVDAIGAETVVNARIG-VEAFTAKGLIVEHRGFLEV-FPYQRWADMEMPA--YQVGHPAAVRSLLLRESSTEPPPLLSESDLISLMDRHGIGTDATIAEHVKKVQDRNYVRKLPGATGRFEPLPLGLALVDGCEAVAVHLARPTERARQEAAMKRIASGEVAQAPMIVDALNAYTALFESLRTHAAEMEAAISNHLS 658          
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A5J4Z1W2 (DNA topoisomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1W2_PORPP)

HSP 1 Score: 559 bits (1441), Expect = 8.220e-183
Identity = 311/639 (48.67%), Postives = 415/639 (64.95%), Query Frame = 0
Query:    4 RILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQL-------EKYALTDMDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCR-VPL--EWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDP------LTFLWPRSGPQDDGAHPPIHPTQGAPLS--FDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHF 624
            R+L VAEKPSAA+EI  VL GG    +R+  S+YN I EF+M+ Q +   ++FTSV+GHIK  DFE + + W S DP+ LL    +RV   VS ++ PL  TL+ EAR    LILWLDCDSEGE+IA +V +I K     + VKRARFSA+TR DLF A+  L +PNERVA MV+ RQEIDLRAG+A+TRFLT  L       +  + +   KQ ISYGPCQFP LGLVVDR+L I+NF S+ F+V +L+LK    +PL  EW R++LFD+++A   + LC E A      A V R  +  + RW+PLPLSTVE+Q  A+R L++ S + M  AEALY  G ISYPRTET+ F+   DL+ ++ +      W  F  +LL      +       + F  PR+G  DD AHPPIHP + AP S  F      R+++YIT+RFLA+CS+DAVGSET  +V +G  E F+ K LIVE+KG+ EV + +E+W ++D+P  L E D  + I+    R S+T+PPPLL E+DLI+LMD HGIGTDATIAEH++K+Q+R YV K AQ RF P  +G  LV   E C++ LARP +RA+QE ELKR+  GE+    +L  A++ YR   + L  RR+   + F  +F
Sbjct:    5 RVLCVAEKPSAAREISMVLAGGSKVVTRNSFSKYNRIMEFDMT-QPQEMKIVFTSVSGHIKEVDFEPKCQSWQSYDPALLLNREASRVISRVSADKEPLERTLKHEARHCQVLILWLDCDSEGEKIAFEVMEIVKSGNPRIDVKRARFSAITRQDLFHALCHLQLPNERVADMVSARQEIDLRAGAAFTRFLTLLLTERFGGVQAVSRSTGKKQPISYGPCQFPALGLVVDRFLMIKNFKSQAFYVIDLLLKTRNGIPLKFEWARQRLFDQHAAQVCFLLCHEAALRANETARVCRKQRSERRRWKPLPLSTVEMQIAASRKLQMTSEQAMNAAEALYTNGFISYPRTETDVFNPNIDLRAIVAEQAGDARWSGFVSQLLGGDGGNENNAQAGGIRFERPRAGKHDDQAHPPIHPLRCAPSSSGFGDPHQDRLFEYITRRFLASCSVDAVGSETLVEVQIGM-ERFSTKALIVERKGFYEV-FTYERWAERDLP-DLQEGDE-VSIDEMHLRTSETEPPPLLAESDLISLMDRHGIGTDATIAEHVKKIQERGYVTKNAQNRFVPMTLGLGLVSGFELCEVFLARPTVRAEQEAELKRVGTGEVHMDVMLSHAMDLYRTLFTSLLDRRSRFVSAFEPYF 638          
BLAST of Ggra9175.t1 vs. uniprot
Match: L1K3I3 (DNA topoisomerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3I3_GUITC)

HSP 1 Score: 499 bits (1286), Expect = 1.610e-165
Identity = 270/599 (45.08%), Postives = 383/599 (63.94%), Query Frame = 0
Query:    4 RILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALTDMDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVL-KDCRVP-LEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLWPRSGPQDDGAHPPIHPTQGAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALE 600
            R+L VAEKPS AKE+  +L  G  AQ+ +  S+YN  +EF+  L GRP  ++ TSVTGH+   DF++ +RKW +C+P QLL PS  +V   + ++++ L   L  E RR   L+ +LDCD EGE I+ +V +IC++A   + V+RA FSA+   D+ RA+  L +PN+ ++  V  R EIDLR G+A+TRF T  L K     +  +++S+GPCQF TLG +VDR  +I+ FV   FW F   L +D +    +W R +LFD  +   +YE+  E+      +ATV  V +R+K RWRPLPLSTV LQ +A+R LR++S  TM+IAE LYNKG ISYPRTET +F    +L+ LI K      WG++A  LL+ S       F WPR+G  DD AHPPIHPTQ    +  S   A++Y+ + + FLA CS +A+G+ET  ++ +G  E F +KGL++++  +L+V YP+E+W+DKD+P+   E +   P E       +TQ PPLL EADLI+LMD HGIGTDATIAEHI KVQ R Y  K    +FSPT +GK+LV ++E   + LARPH RA+ E ++ +I +G+  A  V++  +E
Sbjct:    5 RVLCVAEKPSVAKELAAILSQGH-AQAFNTHSQYNRKFEFSYELDGRPCTLVVTSVTGHLMERDFDESHRKWHTCEPIQLLDPS-IQVIKMIPQDKKGLERNLLEEGRRCGQLVCFLDCDREGENISYEVIEICQKANPRIRVRRAHFSALIPRDIHRAMRTLTLPNQSLSEAVEARSEIDLRLGAAFTRFQTMVLGK-RFEQLSDKLLSWGPCQFATLGFIVDRAWKIERFVPEDFWSFRCNLSRDGKTAHFDWRRGRLFDRVACTLIYEMLMEDP-----IATVNSVHERLKERWRPLPLSTVNLQTIASRKLRMSSEETMQIAEELYNKGFISYPRTETEKFKEGTNLQELISKQCESGHWGNYANELLAGS-------FQWPRAGQNDDQAHPPIHPTQFT--NSLSGKQAQLYELVVRHFLACCSKNAIGAETTVEISIG-VEQFVSKGLMIKELNWLKV-YPYERWSDKDIPI-FTEGEQFEPTE-LAMTEGRTQAPPLLSEADLISLMDSHGIGTDATIAEHITKVQQRDYAIKSDSQQFSPTSLGKSLVTSYEAIGLELARPHFRARMEQDMTKIASGQTSARVVIEEWME 582          
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A2P6RSQ3 (DNA topoisomerase n=5 Tax=Rosoideae TaxID=171638 RepID=A0A2P6RSQ3_ROSCH)

HSP 1 Score: 503 bits (1295), Expect = 1.460e-163
Identity = 285/657 (43.38%), Postives = 384/657 (58.45%), Query Frame = 0
Query:    4 RILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKY----ALTDMDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCR--VPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLW--PRSGPQDDGAHPPIHPTQ-GAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFSEVVSTLTPDLRGDELAGEGKGIREVG 651
            R+LNVAEKPS AK + N+L  GQ  + R GRSRYN IYEFN S+ G P  M+FTSVTGH+   +FEDRYRKW SCDP  L    Q  V  +V E++  +  TL  EAR   WL+LWLDCD EGE IA +V D+C    R L +KRARFSA+   D+ RAV  LD  N+  A  V  RQEIDLR G+++TRF T  L       + TD    V+SYGPCQFPTLG +V+R+  IQ+     FW      +         W R   FD   A+ +YE+C E+       ATV +V ++ K ++ P PL+T+EL+K A+R  R++S  TM++AE LY  G ISYPRTET+ FS   DL  ++Q+   H  WGS+A+RLL      DP + LW  P SG  DD AHPPIHPT+  +  S  S DH R+Y+ + + FLA  S  AVG+ET  ++ + + E F+A G ++  K YL+V Y FE W    +P   +     IP  + T     T+PPPLL EADL+  MD  GIGTDAT+ +HI+K+ DR Y  K +  RFSPT +G+ALV+ ++     L +P++RA  E ++K +  G    A+VL++ L++ +A     +  +  L       F     +  P   GDE    G+ IR  G
Sbjct:    6 RVLNVAEKPSVAKSVANILSRGQGLRMREGRSRYNKIYEFNYSINGCPCQMLFTSVTGHLMELEFEDRYRKWHSCDPVLLF---QAPVRKFVPEDKLDIKRTLEEEARMCQWLVLWLDCDREGENIAFEVIDVCTSVNRHLTIKRARFSALIDRDIHRAVQNLDNANKYFADAVDARQEIDLRIGASFTRFQTMLLRDAFVIDSATDDRNLVLSYGPCQFPTLGFIVERYWEIQSHEPEEFWTINCSHRSDEGIATFSWMRGHFFDHACAVIIYEMCVEDP-----TATVTKVRQQEKLKYPPYPLNTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDGFSPNTDLHAIVQEQQGHPGWGSYAQRLL------DPASGLWRNPSSGGHDDKAHPPIHPTKFSSGESGWSQDHNRLYELVVRHFLACVSQPAVGAETTVEIDI-AGEMFSASGRVILAKNYLDV-YRFESWGGSLLPTYAVG-QQFIPT-TLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKACFVDARLNKVKLFEAMGVFFER---SNRPG--GDEQHASGEFIRRCG 639          
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A2K2ACL1 (DNA topoisomerase n=10 Tax=Saliceae TaxID=238069 RepID=A0A2K2ACL1_POPTR)

HSP 1 Score: 498 bits (1283), Expect = 1.180e-161
Identity = 283/678 (41.74%), Postives = 401/678 (59.14%), Query Frame = 0
Query:    3 LRILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALTDMDKQ----VISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCR--VPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLW--PRSGPQDDGAHPPIHPTQ-GAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFSEVVSTLTPDLRGDELAGEGKGIREVGVVE---VDIKRVEVANGMIG 668
            +++LNVAEKPS AK +  +L   Q  + R GRSRYN I+EFN S+ G+   M+ TSVTGH+   +FEDR+RKW SCDP+ L       V  YV E++  +  TL  EARR  WL+LWLDCD EGE IA +V ++CK   R+L ++RARFSA+   D+  A   L  PN+  +  V  RQEIDLR G+++TRF T  L    + D  +     V+SYGPCQFPTLG VV+R+  IQ+     FW      +         W R  LFD  S++ LYE+C EE       ATV +V ++ K ++ P PLST+EL+K A+R  R++S +TM++AE LY  G ISYPRTET+ FS   DL  ++Q+H  H  WGS+A+RLL P         LW  P +G  DD AHPPIHPT+  A  S  S DH R+Y+ + + FLA  S  AVG+ET  ++ + + E F+A G ++  K YL+V Y FE W D  +P + ++    IP  + T     T+PPPLL EADL++ MD  GIGTDAT+ +HI+K+ DR YV K A  RFSPT +G+ALV+ ++     L +P++R+  E ++K +  G    A+VL + L++ +A     K  +  L    +  F+      +    GD+ +  G+ +R  G+ +   + +K+    N M+G
Sbjct:    2 IKVLNVAEKPSVAKSVATILSRNQ-LRVRDGRSRYNKIFEFNYSINGQQCHMLVTSVTGHLMEVEFEDRFRKWHSCDPADLYTAP---VRKYVPEDKLDIKRTLEEEARRCHWLVLWLDCDREGENIAFEVMEVCKGVNRNLTIRRARFSALIERDIHEAAQNLIAPNQWFSDAVDARQEIDLRIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCTHRSDEGLASFNWMRGHLFDYTSSVILYEMCVEEP-----TATVTKVQQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQEHPVWGSYAQRLLDPGAG------LWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHHRLYELVVRHFLACVSQPAVGAETVVEIDI-AGERFSASGRVILAKNYLDV-YRFESWGDSMIP-TYVQGQQFIPA-TLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFLDAKVNKVKLLEAMAIFFNR-----SDRSNGDDSSALGENVRPCGLCQEANMVLKKNRDGNFMVG 655          
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A446SDJ8 (DNA topoisomerase n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446SDJ8_TRITD)

HSP 1 Score: 487 bits (1253), Expect = 6.340e-161
Identity = 271/613 (44.21%), Postives = 377/613 (61.50%), Query Frame = 0
Query:    2 ALRILNVAEKPSAAKEIMNVL-KGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLEKYALTDMDKQ----VISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFEL--VLKDCRVPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLW--PRSGPQDDGAHPPIHPTQGAPLSFD-STDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRA 604
            A+R+LNVAEKPS AK +  +L +GG   QSR GRSRYN ++EFN ++  +   M+ TSVTGH+   DF+DRYR+W SCDP++L       V   V ++++ +  TL  EAR   WL+LWLDCD EGE IA +V DIC  A R+L + RARFSA+   ++  AV  L  PN+  A  V  RQEIDLR G+++TRF T  L+   + D+  +    V+SYGPCQFPTLG +V+R+  IQ      FW         +      W R  LFD  SA+ +YE+C  E      +ATV+ V  + K ++ P PLSTVELQK A+R  R++S  TM++AE LY  G ISYPRTET+ FS   DL  ++++ V+H  WG++A+RLL+P         LW  P +G  DD AHPPIHPT+ +    + S DH +VY+ + + FLA CS  AVG+ET  +V + + E F A G +V  K YL+V Y ++ W    +P   +     +P  S T     T+PPPLL EADL++ MD  GIGTDAT+ EHI+K+ DR Y  K A  RFSPT +G+ALV+ +++    L +P++RA  E+++K +  G    AQVL+  L++ +A
Sbjct:    7 AIRVLNVAEKPSVAKSVAEILSRGGM--QSRAGRSRYNRVFEFNYAIGAQACHMLVTSVTGHLMELDFDDRYRRWYSCDPAELF---HAPVRKAVPQDKQDIKRTLEEEARTCQWLVLWLDCDREGENIAYEVVDICAGANRNLNIWRARFSALIPREIHEAVQHLARPNKLFADAVDARQEIDLRIGASFTRFQTMLLKDAFVLDVSGEERNMVLSYGPCQFPTLGFIVERFWEIQAHEPEEFWTINCSHTSDEGTASFIWIRGHLFDYSSAVVIYEMCVHEP-----MATVQNVRNQEKLKYPPYPLSTVELQKRASRCCRMSSEHTMKVAEELYQAGFISYPRTETDSFSPNTDLHAIVREQVDHPDWGTYAQRLLNPEER------LWRNPSNGGHDDKAHPPIHPTKFSTGENNWSPDHKKVYELVVRHFLACCSQPAVGAETTVEVDI-AGEQFNASGRVVLAKNYLDV-YRYDSWGGSLLPTYTIG-QQFVPT-SLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHEHIKKLLDRCYATKDANSRFSPTNLGEALVMGYDEMGYELWKPYLRAMMESDMKSVSVGTKSKAQVLEGCLQQMKA 599          
BLAST of Ggra9175.t1 vs. uniprot
Match: A0A5D6XRA3 (DNA topoisomerase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRA3_9STRA)

HSP 1 Score: 497 bits (1280), Expect = 7.240e-161
Identity = 282/639 (44.13%), Postives = 397/639 (62.13%), Query Frame = 0
Query:    4 RILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGRPSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLL---VPSQTRVEWYVSEERRPLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEA-KRSLLVKRARFSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLE-KYALTDMDKQ-VISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDCRVP------LEWFRKQLFDEYSAMTLYE-LCAEEAQADGNVATVKRVDKRVKTRWRPLPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTYDLKGLIQKHVNHTTWGSF-AERLLSPSTNQDPLTFLWPRSGPQDDGAHPPIHPTQGAPL-SFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEYFTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQTQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQG-RFSPTEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALEEYRAKLSYLKTRRAVLHTVFSRHFSE 626
            ++LNVAEKPS AKEI  +L GGQ AQ R G S+YNP+YEF   LQG+   M  TSV+GH+   +F+  YR W SC P +L    V  +TR +    E +R + +TL  EAR++ WL+LWLDCD EGE IA +V  +C+ A  R L V RARFSA+   D+  A   L  PNE++A     R EIDLR G+A+TRF T +L+ ++     D+  VISYGPCQFPTLG VV+R+L +QNF   PF+  +L  +    P        W R ++FD  + + LYE L A+ A      A V+ V+KR   + +PLPL+TVELQK A+R LR++S +TM+ AE+LYNKG++SYPRTETN+F    D+  L++ H +   WG + ++ LL  ++  +P     PR G  DD AHPPIHPT+  PL S       +VY+++T+ FLA CS DAVG +T   V + + E F+  GL++ ++ YL++ Y +E W+   +P+   + D  +P  +      +T PPPLL EADLIALMD +GIGTDATIAEHI+ +  R Y EK+  G +F PT +G ALV+++E   + LA+P +RA  EN+ K I  G+ +  QV+Q+ +E+ +     +     VL   FS HF++
Sbjct:    5 KVLNVAEKPSVAKEISAILSGGQ-AQRRQGFSQYNPVYEFPYELQGQRVHMTITSVSGHLMELEFDANYRSWHSCSPVELFTAAVSKKTRAD----ETQRKIEKTLVNEARQSQWLVLWLDCDREGENIAFEVKSVCERAASRRLRVFRARFSALIPRDIVHAAQHLAAPNEQLALACDARSEIDLRIGAAFTRFQTMRLQSRFPALKKDRGGVISYGPCQFPTLGFVVERFLHVQNFEREPFFRLDLAHRQADQPGAPTTAFAWDRGRVFDRVACLCLYEALVAQPA------ARVEAVEKRPTWKRKPLPLTTVELQKRASRWLRVSSEQTMKAAESLYNKGVLSYPRTETNKFKEGTDVLALVRLHESSPQWGDYVSQTLLGGASKYEP-----PRHGGADDQAHPPIHPTKSVPLASIADAVERKVYEFVTRHFLACCSKDAVGHQTTVRVRI-AGEGFSTSGLMIAERNYLDI-YKYENWSASAIPV-YEQGDVFVP-SALAMAAGETAPPPLLSEADLIALMDSNGIGTDATIAEHIKTILKREYAEKVNDGTQFKPTTLGLALVLSYEHMGLDLAKPALRAAMENDCKAIALGQKDCRQVVQTCMEQMKEIFLSVTRNAQVLDQTFSEHFNQ 623          
The following BLAST results are available for this feature:
BLAST of Ggra9175.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPA90.000e+080.48DNA topoisomerase n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q6W30.000e+069.05DNA topoisomerase n=1 Tax=Chondrus crispus TaxID=2... [more]
DNA topoisomerase 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D55854.620e-23960.24DNA topoisomerase 3-like n=1 Tax=Mercenaria mercen... [more]
A0A1X6NQS16.070e-19549.01DNA topoisomerase n=1 Tax=Porphyra umbilicalis Tax... [more]
A0A5J4Z1W28.220e-18348.67DNA topoisomerase n=1 Tax=Porphyridium purpureum T... [more]
L1K3I31.610e-16545.08DNA topoisomerase n=1 Tax=Guillardia theta (strain... [more]
A0A2P6RSQ31.460e-16343.38DNA topoisomerase n=5 Tax=Rosoideae TaxID=171638 R... [more]
A0A2K2ACL11.180e-16141.74DNA topoisomerase n=10 Tax=Saliceae TaxID=238069 R... [more]
A0A446SDJ86.340e-16144.21DNA topoisomerase n=2 Tax=Triticum turgidum subsp.... [more]
A0A5D6XRA37.240e-16144.13DNA topoisomerase n=1 Tax=Pythium brassicum TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPRINTSPR00417PRTPISMRASEIcoord: 418..434
score: 35.42
coord: 212..230
score: 40.43
coord: 520..534
score: 42.51
coord: 116..129
score: 47.57
coord: 333..342
score: 54.8
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 170..596
e-value: 1.2E-97
score: 327.6
IPR013497DNA topoisomerase, type IA, centralCDDcd00186TOP1Accoord: 179..606
e-value: 1.09974E-112
score: 343.433
IPR003601DNA topoisomerase, type IA, domain 2SMARTSM00436topIban2coord: 145..242
e-value: 5.2E-24
score: 95.8
IPR003602DNA topoisomerase, type IA, DNA-binding domainSMARTSM00437topIaneu2coord: 291..558
e-value: 7.4E-72
score: 254.7
IPR006171TOPRIM domainSMARTSM00493toprim5coord: 4..142
e-value: 0.0036
score: 25.7
IPR006171TOPRIM domainPFAMPF01751Toprimcoord: 7..153
e-value: 5.5E-13
score: 49.0
IPR013826DNA topoisomerase, type IA, central region, subdomain 3GENE3D1.10.290.10Topoisomerase I, domain 4coord: 299..432
e-value: 5.6E-144
score: 481.7
NoneNo IPR availableGENE3D3.40.50.140coord: 1..169
e-value: 4.0E-46
score: 159.3
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 4..628
IPR013825DNA topoisomerase, type IA, central region, subdomain 2GENE3D2.70.20.10Topoisomerase I, domain 3coord: 236..504
e-value: 5.6E-144
score: 481.7
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10Topoisomerase I, domain 2coord: 177..605
e-value: 5.6E-144
score: 481.7
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 4..628
IPR034144DNA topoisomerase 3-like, TOPRIM domainCDDcd03362TOPRIM_TopoIA_TopoIIIcoord: 4..166
e-value: 6.64937E-39
score: 138.905
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 5..609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:299099..301292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9175.t1Ggra9175.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 299099..301292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9175.t1 ID=Ggra9175.t1|Name=Ggra9175.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=706bp
MALRILNVAEKPSAAKEIMNVLKGGQPAQSRHGRSRYNPIYEFNMSLQGR
PSLMIFTSVTGHIKNTDFEDRYRKWGSCDPSQLLVPSQTRVEWYVSEERR
PLAETLRTEARRADWLILWLDCDSEGERIAVDVADICKEAKRSLLVKRAR
FSAMTRGDLFRAVNQLDVPNERVARMVATRQEIDLRAGSAYTRFLTKQLE
KYALTDMDKQVISYGPCQFPTLGLVVDRWLRIQNFVSRPFWVFELVLKDC
RVPLEWFRKQLFDEYSAMTLYELCAEEAQADGNVATVKRVDKRVKTRWRP
LPLSTVELQKVAARSLRINSHRTMEIAEALYNKGLISYPRTETNRFSRTY
DLKGLIQKHVNHTTWGSFAERLLSPSTNQDPLTFLWPRSGPQDDGAHPPI
HPTQGAPLSFDSTDHARVYQYITKRFLATCSIDAVGSETRTDVLVGSAEY
FTAKGLIVEQKGYLEVLYPFEQWTDKDMPLSLLEIDACIPIESFTFRRSQ
TQPPPLLQEADLIALMDHHGIGTDATIAEHIRKVQDRRYVEKLAQGRFSP
TEIGKALVIAHEQCQIHLARPHMRAKQENELKRILNGEIEAAQVLQSALE
EYRAKLSYLKTRRAVLHTVFSRHFSEVVSTLTPDLRGDELAGEGKGIREV
GVVEVDIKRVEVANGMIGQLYVKAVTEISNYHETVCWNPWTRFVQYVTIK
LLKSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013497Topo_IA_cen
IPR003601Topo_IA_2
IPR003602Topo_IA_DNA-bd_dom
IPR006171TOPRIM_domain
IPR013826Topo_IA_cen_sub3
IPR013825Topo_IA_cen_sub2
IPR013824Topo_IA_cen_sub1
IPR000380Topo_IA
IPR034144TOPRIM_TopoIII
IPR023405Topo_IA_core_domain