Ggra9194.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9194.t1
Unique NameGgra9194.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length423
Homology
BLAST of Ggra9194.t1 vs. uniprot
Match: A0A2V3IP99 (E3 ISG15--protein ligase HERC5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP99_9FLOR)

HSP 1 Score: 511 bits (1317), Expect = 4.550e-178
Identity = 241/413 (58.35%), Postives = 314/413 (76.03%), Query Frame = 0
Query:    5 LKTLLCLGFASKSFVNLVESDNQSDYGSWMNWIFNEKEKDLEP--DVGNTRMKVLPEMPGRVLVWGGRYGKVPRSLDGLKPNMTKVAVGNGFGGAISSDNKVFGFYKGNDSDVVQEIQVNGRPMHVEVMESTREIVLLDSKGRVHSSTCEKGGGFAPAKTLEGALKRMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQYHIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSGCTTAVVVEEDEYSGR 415
            LK +LCLG AS ++ NLV  +  S  GSW  W+F E+    +   + GN    VL E PG+VLVWGG +GK+PR++ GL+ N+ KVA+GNGFGGAISS+  ++GF      D VQ+I + G+P H+EVMES R++VLL+SKGRV+ S+    GGF PA+ +EG L+++ V  L CGR+HC A+SD+G+VI WG +N  GQLG       ++ NPQ PR+V  PG+  + DVACGD+H+VF+D +G  YSVGCD+WAQLGVS+EPWL  HE F   +Q+A LL+GLAG+EVACG QHSV+LVKDGTVF+FGFNQWGQLGHHNYS+  PPSPIA Y+IRA+SV AGENHTCL+T++G+LMCIG NE+GQLG GTLQSSMKW+KVK ++KV++P Y++SSG  TAVVV++D Y  +
Sbjct:    5 LKGVLCLGVASSTYFNLVACEAPSRDGSWTRWLFQEEIPITKKRKEKGN----VLTESPGKVLVWGGMFGKLPRTIKGLQENIKKVAIGNGFGGAISSEGLLYGFTSRTGKDSVQQIDIPGKPTHLEVMESNRQLVLLNSKGRVYISSVGDQGGFEPARMMEGILRKVKVDRLSCGREHCVALSDRGQVIAWGNSNEYGQLGK----SSKHLNPQTPRVVDIPGNASITDVACGDQHSVFIDLKGGVYSVGCDKWAQLGVSSEPWLKGHERFTNGVQRASLLKGLAGSEVACGSQHSVLLVKDGTVFTFGFNQWGQLGHHNYSSLAPPSPIANYNIRAVSVCAGENHTCLVTEYGELMCIGCNEYGQLGIGTLQSSMKWRKVKAERKVVRPSYIHSSGLATAVVVDKDLYKDK 409          
BLAST of Ggra9194.t1 vs. uniprot
Match: R7Q715 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q715_CHOCR)

HSP 1 Score: 285 bits (730), Expect = 1.670e-91
Identity = 129/240 (53.75%), Postives = 175/240 (72.92%), Query Frame = 0
Query:  167 LKRMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQYHIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSGCTTAVV 406
            ++R +++ + CGR+HC A+S +G    WG +N+ GQLG  +  +  + +P++PR +  P  V +RD +CG +HT+ LDR G  + VG D+WAQLGVSAEPWL  HE  +  ++K+ L+  LAG  VA GGQHSVMLV+DGTVFSFGFN+WGQLGHHNYS+  PPSP A   IRAI+VAAGENHTC++ D+G++ CIG N+HGQLGNG LQ +M WK+V+  KK +KP  +  SG T+A +
Sbjct:    1 MRRTSIEKVRCGREHCIAVSSRGEAFAWG-SNSHGQLGLGQVGDLSDVDPEIPRKLILPDGVRIRDASCGRQHTILLDRNGTIFGVGNDQWAQLGVSAEPWLRSHEKASGEVRKSSLVGELAGRAVAGGGQHSVMLVRDGTVFSFGFNRWGQLGHHNYSSLAPPSPTADITIRAIAVAAGENHTCIVKDNGEMWCIGGNDHGQLGNGNLQPTMVWKRVRVAKKPLKPCSVSLSGNTSAAI 239          
BLAST of Ggra9194.t1 vs. uniprot
Match: A0A7S3A3D0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3D0_9RHOD)

HSP 1 Score: 193 bits (491), Expect = 6.610e-54
Identity = 125/369 (33.88%), Postives = 187/369 (50.68%), Query Frame = 0
Query:   62 GRVLVWGGRYG----------KVPRSLDGLKPNMTKVAVGNGFGGAISSDNKVFGFYKGNDSDVVQEIQ------VNGRPMHVEVMESTREIVLLDSKGRVHSSTCEKGGG---FAPAKTLEGALKRMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAEPWL-ADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQYH---IRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSGCTTAVVV 407
            G +LVWGG  G          K+PR++  L P +   A+G   G AI +   V+   +  DSD +   +      +  R   V V  S  E+++  ++G + S + +       +  A TLEG   R  + ++ CG  HC AIS  G    WG  N  GQLG    +++     + P+ ++FP  V V   +CGD+HT  +D+ G  ++ G D W Q G + EPWL +D     P + +   L+     +V CGG+H+V +V+DGTVF+ G  +WGQLGHHN+  F P   +  +     RA S +AG NHT +I+  G L   G+NE+GQLGN  LQ S    KVK + +  K     S+   +A +V
Sbjct:   35 GELLVWGGGTGDCFGGGTTAVKLPRNVKDL-PLVRDAAIGCAVGAAIDASGGVYAISRRKDSDTMYAAEAEKLTKIKARATSVAVAPSD-EVLVTTNRGYLMSISKDSNSDSDDWGAATTLEGEHSRSTIVDVTCGTGHCVAISSIGEAFAWG-RNECGQLGHGTKSDKA---VEFPKRMRFPKHVEVEKASCGDQHTAIVDKSGKLWTCGSDEWCQAGHTEEPWLLSDKNVVLPTVVEK--LRKKKIHDVDCGGEHTVAVVEDGTVFTTGLGRWGQLGHHNFVHFAPVHAVQGFDGTGKRATSASAGANHTQIISTDGRLYACGANEYGQLGNAGLQPSALPGKVKGEARRSKVAKTISARDASAAIV 395          
BLAST of Ggra9194.t1 vs. uniprot
Match: M2XMJ2 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XMJ2_GALSU)

HSP 1 Score: 177 bits (449), Expect = 2.140e-47
Identity = 90/218 (41.28%), Postives = 133/218 (61.01%), Query Frame = 0
Query:  172 VKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQY----HIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVK 385
            V ++ CG+ HC A++ +G V++WG++++ GQLG  + T E  DN + P +V  P D+ V+ V CGD H+ FL   G+ ++ G ++W QLG   EPW  D   + P  Q+   +      ++ACG  H+++L+KDGTV+S GF +WGQLGHHNY+     S I+      + R   +AAG NH+CL+T  G L  +G+N  GQLG GTLQ S   + VK
Sbjct:  193 VDHIHCGKSHCLALTKQGVVLSWGLSDSFGQLGRGQVTSE--DNCETPGVVVVPKDIRVQKVCCGDAHSAFLMEDGSVWTCGSNQWLQLGNKEEPW-KDGNDYRPTPQRVQGIGQRVATDIACGAHHTLILIKDGTVYSCGFGRWGQLGHHNYAQLSYLSRISWLDGLRNGRIRDIAAGSNHSCLVTTDGKLYSLGANFAGQLGIGTLQPSAIPRLVK 407          
BLAST of Ggra9194.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8F82 (LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8F82)

HSP 1 Score: 154 bits (390), Expect = 2.770e-41
Identity = 84/178 (47.19%), Postives = 112/178 (62.92%), Query Frame = 0
Query:  230 VRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQYHIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSGCTTAVVV 407
            V  V CG +H V +D  G  YS G + + QL  +A P +AD        + A  +  LA  E+ACG  H++ LVKDGTVFSFG N +GQLGHHN S+F PPSPIA   +RA++V +G NH+C++TD G++ CIGS + GQLG+G LQ S  W++VKT         L + G TTA +V
Sbjct:   32 VTRVRCGSQHCVAIDAHGAAYSWGDNSFQQLARAAGP-VADA-------RPAECIADLAVCELACGDGHTLTLVKDGTVFSFGANDFGQLGHHNMSSFAPPSPIANVSLRAVAVRSGRNHSCMVTDLGEVYCIGSGDAGQLGSGPLQRSAVWRRVKTLGHHGIVANLAAGGDTTAAIV 201          
BLAST of Ggra9194.t1 vs. uniprot
Match: A0A7S0ZCC3 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCC3_9RHOD)

HSP 1 Score: 124 bits (311), Expect = 7.990e-28
Identity = 112/421 (26.60%), Postives = 172/421 (40.86%), Query Frame = 0
Query:   64 VLVWGGRYGKVPRSLDG-LKPNMTKVAVGNGFGGAISSDNKVFGFY------KGNDSDVVQEIQVNGRPMHVEVMESTREIVLLDSKGRVH-------------SSTCEKGGGFAPAKTLEGALKRMNVKNLECGRQHCAAISDKGRVITWG------ITNTSGQLGTLESTEEENDNP-QVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGV-SAEPWLAD------HEGFAPAIQKAGLLQGLAGAE-----------------VACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQYHI--RAISVAAGENHTCLI------TDHGD------LMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSGCTTAVVVEEDEYSGRKPVE 419
            V +WGG +GK PR+L+  +  N   +++G      IS+   V  F       + +D D V    +  R + V V      +V +   G V+             +S        A  + LEGALK++   ++ C   HC A+  KG  + W       +   +  LG    +E    N  + P  +     + ++  ACG  HT  LD   N + VG DRW Q     + PW         H    P     G +     AE                 VACG  H++  + D  + SFGFNQWG  GHHNY+   P   + +     +   +AAG +H+ +       TD+ +      +   G+NE GQLGNGTLQ+S   + + +   V     L +   T+AV+    E S + P +
Sbjct:   21 VFIWGGIFGKSPRALNHPVLQNSQSISLGMDTLATISTSGNVHAFQYESLINEESDHDFVHAPILMNRCISVAVGPFD-SVVSVTKDGSVYQFDAIPPIPTDVDASNQNPPPFLAEPRRLEGALKKIKAVSVNCSSSHCVAVGSKGEAVAWSDAVPDQLEAIAPALGRGPGSESLKANEARQPVAISGLDGISIQKAACGATHTALLDSERNLFFVGSDRWGQTTAWKSAPWNQGQQDPRKHRVLGPYKAPDGDIGIRYTAEKMCPDKNNYYTERSTETVACGSAHTIGSMLDHRIVSFGFNQWGSCGHHNYNHIAPVGEVEKLPAPTKVAGLAAGASHSLVALQDMTTTDNPNESQLTKIFSFGANERGQLGNGTLQASSVPQIILS---VTGFRTLAAGMSTSAVIASSIEESPKTPAQ 437          
BLAST of Ggra9194.t1 vs. uniprot
Match: C5LU91 (Secretion-regulating guanine nucleotide exchange factor, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LU91_PERM5)

HSP 1 Score: 119 bits (299), Expect = 1.150e-25
Identity = 87/296 (29.39%), Postives = 149/296 (50.34%), Query Frame = 0
Query:  128 VEVMESTREIVLLDSK----GRVHSSTCEKGGGFAPAKTLEGALKRMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVG---CDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGA---EVACGGQHSVMLVKDGTVFSFGFNQWGQLGH--HNYSTFGPPSPIAQYHIRAIS-VAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSGCTTAVVVEED 410
            V++++ +   V  DS+    GR+  +  +   G     +L     R  ++++  G  H  A+++ G+V++WG+ N SGQLGT +          +P  VK P DV +  +ACG  ++V + + G  ++ G      W +L V  + W   ++   P      +  GLAG+   +V+CG QH + L K+G VFS+G+N +GQLG   H     G   P    H+  IS +AAG  H+  + D G +   GSN  GQ+G+G  Q   +     T+ ++ +P+   ++G  T ++V +D
Sbjct:  156 VQIVDGSPAAVTADSRVFAWGRMPWTGAQASQGLEDVLSLA----RKRIRSVAIGAGHALALTEGGKVMSWGL-NDSGQLGTGDERSRI-----IPETVKLPSDVYIDKIACGPDYSVAVTKAGQLWTWGRYQASNWPRLFV--DTWCNGNK---PGCDNTAV--GLAGSRILKVSCGDQHMLALTKEGEVFSWGYNDFGQLGWGLHGVDVVGQQRPHKVPHLPKISDIAAGGGHSVAVGDDGAVYSWGSNSQGQIGHGLRQDFAE----ATRVQMPQPVKAVTAGKVTTLLVCDD 430          
BLAST of Ggra9194.t1 vs. uniprot
Match: A0A7J6UN12 (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6UN12_PEROL)

HSP 1 Score: 114 bits (286), Expect = 2.640e-24
Identity = 88/275 (32.00%), Postives = 132/275 (48.00%), Query Frame = 0
Query:  128 VEVMESTREIVLLDSKGRVHSSTCEKGGGFAPAKTLEGALK--RMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVG---CDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGA---EVACGGQHSVMLVKDGTVFSFGFNQWGQLGH--HNYSTFGP--PSPIAQYHIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKV 390
            V+V++ +   V  DS  RV +       G  PA  LE  L   R  V+ +  G  H  A+++ G+V++WG+ N SGQLGT +          +P  VK P DV V  VACG  ++  + + G  ++ G      W +L V  + W   ++   P      +  GLAG    +V+CG QH + L KDG VFS+G+N +GQLG   H     G   P  +         +AAG  H+  + + G +   GSN  GQLG+G  Q   +  +V+  + V
Sbjct:   14 VQVVDGSPAAVTTDS--RVFAWGRMPWTGTQPALGLENVLSLARKRVRCVAVGAGHALALTEGGKVMSWGL-NDSGQLGTGDERSRI-----IPESVKLPSDVYVDKVACGPDYSAAITKAGQLWTWGRYQASNWPRLFV--DTWCNGNK---PGCDNTAV--GLAGKRILKVSCGDQHMLALTKDGEVFSWGYNDFGQLGWGLHGVDVVGQQRPQKVPNLPTTIRDIAAGGGHSVAVGEDGSVYAWGSNSQGQLGHGLRQDFSEATRVQMPQPV 273          
BLAST of Ggra9194.t1 vs. uniprot
Match: A0A7M7JMI5 (HECT domain-containing protein n=4 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JMI5_VARDE)

HSP 1 Score: 115 bits (288), Expect = 6.180e-24
Identity = 79/254 (31.10%), Postives = 125/254 (49.21%), Query Frame = 0
Query:  129 EVMESTREIVLLDSKGRVHSSTCEKGGGFAPAKT------LEGALKRMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPS---PIAQYHIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNG 373
            +V       ++L   G+V+S      G     +       +   L +  +  + CG QH  A+S+ G+V  WG  N +GQLG  E+ + EN     PR+VK  G   V+ +A G  H + L   G  ++ G ++  QLG      L     +    Q    LQG+  +++ CGGQHS++L K GT+  +G N+ GQLG  +      P+   P+ Q+ ++ IS  AGE H+ ++T  G +   GS  +GQLG+G
Sbjct:   54 QVASGRNHTLILSESGQVYSCGSNSHGQLGRPEVGVRKPEIITTLYQHKIVQVACGEQHSMALSEAGQVFVWGANN-NGQLGDPEAKDAENRGH--PRIVKKLGSSAVQ-IASGSNHCLALANNGTVFAWGSNQCGQLG------LGTAGNYVSTPQDVLSLQGVPLSQIVCGGQHSMVLSKSGTLLVWGSNRHGQLGLGDTVDRASPAVVKPLRQHGLKYIS--AGEEHSAVLTADGGVFTFGSGTYGQLGHG 295          
BLAST of Ggra9194.t1 vs. uniprot
Match: probable E3 ubiquitin-protein ligase HERC4 n=2 Tax=Thunnus TaxID=8234 RepID=UPI001C4B9F37 (probable E3 ubiquitin-protein ligase HERC4 n=2 Tax=Thunnus TaxID=8234 RepID=UPI001C4B9F37)

HSP 1 Score: 114 bits (286), Expect = 1.040e-23
Identity = 90/296 (30.41%), Postives = 136/296 (45.95%), Query Frame = 0
Query:   98 ISSDNKVFGFYKGNDSDVVQEI-------QVNGRPMHVEVMESTREI-------VLLDSKGRVHSSTCEKGGGFAPAKTLEGALKRMNVKNLECGRQHCAAISDKGRVITWGITNTSGQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFYSVGCDRWAQLGVSAE-----PWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSVMLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQ-YHIRAISVAAGENHTCLITDHGDLMCIGSNEHGQLGNG 373
            +S+ + V  F K N +  +  I       +V G+   V+  E  + +        LL   GRV    C      +P      AL  + V  + CG QH  A++  G+V TWG  ++SGQLG L   E   ++PQ  R +     +P+  +A G   +  L   G  +S G +   QLG+        P L  H      I             ++CG  H+V+L KDG VF+FG  Q+GQLGH+++S    P  +A+ +  R I +A G +HT ++TD   +   G  E GQLG+G
Sbjct:   28 LSAGHSVLAFVKRNGTAFIIRINENNDGRRVRGKQKFVKSKEKIQAVSCGDDTVTLLTKTGRV---LCVDSVHTSPTPRPLQALCNIPVSQVACGSQHSVALTKDGQVYTWG-QDSSGQLG-LGKRELGANSPQHLRSLSA---IPLVQIAAGGEQSFALSVSGGVFSWGRNNCGQLGLGDTTDRHTPTLVHHLNMKKTIH------------ISCGKDHTVILTKDGVVFTFGSGQYGQLGHNSFSGELRPRLVAELWGARVIKIACGRHHTLVMTDSKRVYSFGCGEQGQLGHG 303          
The following BLAST results are available for this feature:
BLAST of Ggra9194.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP994.550e-17858.35E3 ISG15--protein ligase HERC5 n=1 Tax=Gracilariop... [more]
R7Q7151.670e-9153.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A3D06.610e-5433.88Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XMJ22.140e-4741.28Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8F822.770e-4147.19LOW QUALITY PROTEIN: probable E3 ubiquitin-protein... [more]
A0A7S0ZCC37.990e-2826.60Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
C5LU911.150e-2529.39Secretion-regulating guanine nucleotide exchange f... [more]
A0A7J6UN122.640e-2432.00Uncharacterized protein (Fragment) n=1 Tax=Perkins... [more]
A0A7M7JMI56.180e-2431.10HECT domain-containing protein n=4 Tax=Varroa dest... [more]
probable E3 ubiquitin-protein ligase HERC4 n=2 Tax=Thunnus TaxID=8234 RepID=UPI001C4B9F371.040e-2330.41probable E3 ubiquitin-protein ligase HERC4 n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 343..359
score: 37.25
coord: 230..243
score: 39.29
coord: 249..265
score: 31.37
coord: 359..373
score: 38.89
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 188..243
e-value: 6.1E-12
score: 46.0
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 292..302
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 233..243
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 247..305
score: 10.262899
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 306..356
score: 13.0769
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 189..246
score: 15.509
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 285..413
e-value: 1.5E-26
score: 95.3
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 40..284
e-value: 6.6E-30
score: 106.2
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 62..408
NoneNo IPR availablePFAMPF13540RCC1_2coord: 292..315
e-value: 9.7E-5
score: 22.0
coord: 341..369
e-value: 6.2E-9
score: 35.4
NoneNo IPR availablePANTHERPTHR45982FAMILY NOT NAMEDcoord: 291..390
coord: 159..323
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:355558..356826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9194.t1Ggra9194.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 355558..356826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9194.t1 ID=Ggra9194.t1|Name=Ggra9194.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=423bp
MHRGLKTLLCLGFASKSFVNLVESDNQSDYGSWMNWIFNEKEKDLEPDVG
NTRMKVLPEMPGRVLVWGGRYGKVPRSLDGLKPNMTKVAVGNGFGGAISS
DNKVFGFYKGNDSDVVQEIQVNGRPMHVEVMESTREIVLLDSKGRVHSST
CEKGGGFAPAKTLEGALKRMNVKNLECGRQHCAAISDKGRVITWGITNTS
GQLGTLESTEEENDNPQVPRLVKFPGDVPVRDVACGDRHTVFLDRRGNFY
SVGCDRWAQLGVSAEPWLADHEGFAPAIQKAGLLQGLAGAEVACGGQHSV
MLVKDGTVFSFGFNQWGQLGHHNYSTFGPPSPIAQYHIRAISVAAGENHT
CLITDHGDLMCIGSNEHGQLGNGTLQSSMKWKKVKTQKKVIKPLYLYSSG
CTTAVVVEEDEYSGRKPVEVAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II