Ggra9273.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9273.t1
Unique NameGgra9273.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length163
Homology
BLAST of Ggra9273.t1 vs. uniprot
Match: A0A2V3IGF5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGF5_9FLOR)

HSP 1 Score: 94.4 bits (233), Expect = 2.050e-21
Identity = 49/119 (41.18%), Postives = 76/119 (63.87%), Query Frame = 0
Query:   14 ALFGTAFASAEELQASEKLESPGCSLPPHVAYCADVMRVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRFVEENPMDLENEMPELETTERTRIFKRKCFVKC 132
            ALF  +  S+ +L  +E+  S  C++P  VAYC DVMRVG++ + E+A+HFA L+D   + A+++CSWESF+GK   +EC+STLSRF  EN +   +   +L+ +E      + C+  C
Sbjct:   13 ALFYISVGSSLKLHDTEERMSEPCNIPSDVAYCMDVMRVGTRFNDESAQHFARLEDLLSEHALEECSWESFEGKKSPDECISTLSRF-SENSVPPISSSTDLDFSEHIVRVNKACYNAC 130          
BLAST of Ggra9273.t1 vs. uniprot
Match: A0A2V3IE60 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE60_9FLOR)

HSP 1 Score: 93.6 bits (231), Expect = 1.800e-20
Identity = 49/119 (41.18%), Postives = 75/119 (63.03%), Query Frame = 0
Query:   14 ALFGTAFASAEELQASEKLESPGCSLPPHVAYCADVMRVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRFVEENPMDLENEMPELETTERTRIFKRKCFVKC 132
            ALF  +  S+  L  +E+  S  C++P  VAYC DVMRVG++ + E+A+HFA L+D   + A+++CSWESF+GK   +EC+STLSRF  EN +   +   +L+ +E      + C+  C
Sbjct:   70 ALFYISVGSSLTLHDTEERMSEPCNIPSDVAYCMDVMRVGTRFNDESAQHFARLEDLLSEHALEECSWESFEGKKSPDECISTLSRF-SENSVPPISSSTDLDFSEHIVRVNKACYNAC 187          
BLAST of Ggra9273.t1 vs. uniprot
Match: A0A2V3II71 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II71_9FLOR)

HSP 1 Score: 59.7 bits (143), Expect = 6.700e-8
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 0
Query:   37 CSLPPHVAYCADVMRVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRFVEENPMDLENEMPELETTERTRIFKRKCFVK 131
            C +PP VAYC D+M +GS  + + ++  A LQ +  +  I  C+W  + GK+  +EC+  L+ + +E+  D ++++PE      T +   + F K
Sbjct:   36 CDVPPAVAYCLDMMHLGSNYNSDGSQESAELQHDVDEVPIGMCAWGDWVGKLSADECMQVLAEYEDED--DEDDDVPETGNEAETEVHTTRIFKK 128          
BLAST of Ggra9273.t1 vs. uniprot
Match: F2Z7J1 (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J1_9FLOR)

HSP 1 Score: 55.8 bits (133), Expect = 1.490e-6
Identity = 35/123 (28.46%), Postives = 65/123 (52.85%), Query Frame = 0
Query:    7 LLVLGTAALFGTAF-ASAEELQASEKLE--SPGCSLPPHVAYCADVMRVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRFV--EENPMDLENEMPELETTERTRIF 124
            LL+L + + F   F ASA  ++  +++E  +  C +PP VAYC D++ +GS ++  +++    LQ +  +  +  C+W  + GK+   +CV  L  +   EE    L +   + ETT+ +  F
Sbjct:    3 LLILCSFSAFIVVFIASAANVREVDEIEIINEQCDVPPVVAYCLDMVHLGSNINKNSSQSNGELQHDVEEIPVGMCAWGDWAGKVSAKQCVQILKEYAAAEEEEKRLRDRQNDTETTKTSSRF 125          
BLAST of Ggra9273.t1 vs. uniprot
Match: A0A2V3IIV8 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIV8_9FLOR)

HSP 1 Score: 55.5 bits (132), Expect = 2.030e-6
Identity = 34/116 (29.31%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   16 FGTAFASAEELQASEKLESPGCSLPPHVAYCADVMRVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRFV--EENPMDLENEMPE---LETTERTRIFKR 126
            F  + A   E+  ++ +    C +PP VAYC D++ +GS     +++    LQ +  +  +  C+W  + GK+  NECV  L  +   EE    ++   P+   LETT R   F+R
Sbjct:   16 FSASAARVHEIDETDIINEE-CDVPPVVAYCLDMIHLGSNFKTYSSQRSGELQQDVDEVPVGMCAWGDWAGKLSANECVVVLKEYAAAEEEEDGIKASDPDTDALETTNRFLPFRR 130          
BLAST of Ggra9273.t1 vs. uniprot
Match: A0A2V3II08 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II08_9FLOR)

HSP 1 Score: 54.3 bits (129), Expect = 8.190e-6
Identity = 26/87 (29.89%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   37 CSLPPHVAYCADVMRVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRFVEENPMDLENEMPELETTERTRI 123
            C +PP VAYC D++ +GS  + + +     L+ +  +  I  C+W  + GK+  +EC+  L+ +  E+  D E ++PE E+  +T +
Sbjct:   36 CDVPPVVAYCLDMIHLGSNYNSDGSHDSEELKLDVDEVPIGMCAWGDWVGKLSADECMQVLAEY--EDEADDEEDVPETESDAQTEV 120          
The following BLAST results are available for this feature:
BLAST of Ggra9273.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IGF52.050e-2141.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE601.800e-2041.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II716.700e-830.53Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
F2Z7J11.490e-628.46Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3IIV82.030e-629.31Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3II088.190e-629.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:697170..697658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9273.t1Ggra9273.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 697170..697658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9273.t1 ID=Ggra9273.t1|Name=Ggra9273.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=163bp
MKVFISLLVLGTAALFGTAFASAEELQASEKLESPGCSLPPHVAYCADVM
RVGSQLDHETAEHFANLQDEFVDRAIDDCSWESFDGKMGLNECVSTLSRF
VEENPMDLENEMPELETTERTRIFKRKCFVKCMKKSCFRTKRRKVCRVRC
RRVCKIRKIRKH*
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