Ggra9191.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9191.t1
Unique NameGgra9191.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length74
Homology
BLAST of Ggra9191.t1 vs. uniprot
Match: A0A2V3IPB8 (ATP synthase subunit epsilon, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPB8_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 2.150e-35
Identity = 62/73 (84.93%), Postives = 67/73 (91.78%), Query Frame = 0
Query:    1 MVQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGKIVQRTLVEPGATSEVAAAVAK 73
            MVQYWRAAGMTYLKYSTTCAELVRQALKEPIR+QVLNRAGYAMIKG+W+ GKIVQRTL+EP  +S  A AVAK
Sbjct:    1 MVQYWRAAGMTYLKYSTTCAELVRQALKEPIRSQVLNRAGYAMIKGEWESGKIVQRTLIEPTGSSS-APAVAK 72          
BLAST of Ggra9191.t1 vs. uniprot
Match: M2XSR0 (F-type H+-transporting ATPase subunit epsilon n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSR0_GALSU)

HSP 1 Score: 72.8 bits (177), Expect = 2.080e-15
Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 MVQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGKIVQR 56
            MVQ WRAAG+TYL+Y+  CA+ VR+ALKEP R + L+R  + M K +W +GK+ +R
Sbjct:    1 MVQQWRAAGLTYLRYANICADFVRKALKEPKRTEALSRTTFEMTKSEWSEGKVAKR 56          
BLAST of Ggra9191.t1 vs. uniprot
Match: A0A1X6P4J1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4J1_PORUM)

HSP 1 Score: 63.9 bits (154), Expect = 6.270e-12
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 MVQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGKIVQRTLVEP 61
            MVQYWRAAG++YL+Y    A+ VR ALKE  R +   +  ++M K  W+ GK V R  +EP
Sbjct:    1 MVQYWRAAGVSYLRYCNLTADAVRSALKEQARKKTAAKVPFSMTKSTWEAGKPVSRVQLEP 61          
BLAST of Ggra9191.t1 vs. uniprot
Match: A0A8J5XKI1 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKI1_DIALT)

HSP 1 Score: 60.1 bits (144), Expect = 2.080e-10
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    5 WRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGKIVQRTLVEPGATSEVAAAVAK 73
            WRAAG+T+LKYS  CAE VR+ALKEP++A+ +   G  +    ++ GK V+  ++E  AT+   AA  K
Sbjct:    3 WRAAGITFLKYSQLCAEHVREALKEPMKAKKIASEGLHVRIMKYEGGKRVKTEIIEDAATAAATAAANK 71          
BLAST of Ggra9191.t1 vs. uniprot
Match: V4MG44 (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4MG44_EUTSA)

HSP 1 Score: 58.9 bits (141), Expect = 7.770e-10
Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 0
Query:    2 VQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGK 52
            V +WRAAGMTY+ YS  CA LVR  LKEP +A+ LNR         W  GK
Sbjct:    7 VPFWRAAGMTYISYSNICANLVRNCLKEPFKAEALNREKVHFSISKWAGGK 57          
BLAST of Ggra9191.t1 vs. uniprot
Match: W1PJE6 (Uncharacterized protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1PJE6_AMBTC)

HSP 1 Score: 58.5 bits (140), Expect = 9.290e-10
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    2 VQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGK 52
            V +WRAAGMTY++YS  CA LVRQ LKEP R++ L+R         W  GK
Sbjct:    8 VPFWRAAGMTYVRYSNICASLVRQCLKEPYRSESLSREKVHFSVSKWVDGK 58          
BLAST of Ggra9191.t1 vs. uniprot
Match: M4E542 (Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis TaxID=51351 RepID=M4E542_BRARP)

HSP 1 Score: 58.2 bits (139), Expect = 1.230e-9
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    2 VQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGK 52
            V +WRAAGMTY+ YS  CA LVR+ LKEP +A+ +NR         W  GK
Sbjct:    7 VPFWRAAGMTYITYSNICANLVRKCLKEPFKAESMNREKVHFSLSKWADGK 57          
BLAST of Ggra9191.t1 vs. uniprot
Match: ATP synthase subunit epsilon, mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C75EA (ATP synthase subunit epsilon, mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C75EA)

HSP 1 Score: 58.2 bits (139), Expect = 1.230e-9
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 0
Query:    2 VQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGKIVQRTL 58
            V +WRAAGMTY+ YS  CA LVR  LK+P +A+ LNR         W  GK  + T+
Sbjct:    7 VPFWRAAGMTYVTYSNICANLVRNCLKDPYKAEALNREKVHFAIAKWADGKSQKPTI 63          
BLAST of Ggra9191.t1 vs. uniprot
Match: A0A059BY28 (Uncharacterized protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059BY28_EUCGR)

HSP 1 Score: 57.4 bits (137), Expect = 2.240e-9
Identity = 26/49 (53.06%), Postives = 30/49 (61.22%), Query Frame = 0
Query:    4 YWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGK 52
            +WRAAGMTY+ YS  CA LVR  LKEP +A+ LNR         W  GK
Sbjct:    7 FWRAAGMTYITYSNICANLVRNCLKEPHKAEALNREKVHFAISTWKDGK 55          
BLAST of Ggra9191.t1 vs. uniprot
Match: A0A078GQT3 ((rape) hypothetical protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A078GQT3_BRANA)

HSP 1 Score: 57.0 bits (136), Expect = 3.330e-9
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 0
Query:    2 VQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDKGK 52
            V +WRAAGMTY+ YS  CA LVR+ L+EP +A+ +NR         W  GK
Sbjct:    7 VPFWRAAGMTYITYSNICANLVRKCLREPFKAESMNREKVHFSLSKWADGK 57          
The following BLAST results are available for this feature:
BLAST of Ggra9191.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPB82.150e-3584.93ATP synthase subunit epsilon, mitochondrial n=1 Ta... [more]
M2XSR02.080e-1553.57F-type H+-transporting ATPase subunit epsilon n=1 ... [more]
A0A1X6P4J16.270e-1247.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A8J5XKI12.080e-1044.93Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
V4MG447.770e-1052.94Uncharacterized protein n=1 Tax=Eutrema salsugineu... [more]
W1PJE69.290e-1052.94Uncharacterized protein n=2 Tax=Amborella trichopo... [more]
M4E5421.230e-950.98Uncharacterized protein n=1 Tax=Brassica rapa subs... [more]
ATP synthase subunit epsilon, mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C75EA1.230e-947.37ATP synthase subunit epsilon, mitochondrial n=1 Ta... [more]
A0A059BY282.240e-953.06Uncharacterized protein n=2 Tax=Eucalyptus grandis... [more]
A0A078GQT33.330e-949.02(rape) hypothetical protein n=10 Tax=Brassicaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialPFAMPF04627ATP-synt_Epscoord: 4..48
e-value: 2.9E-16
score: 59.2
IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialPANTHERPTHR12448ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIALcoord: 2..57
IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialCDDcd12153F1-ATPase_epsiloncoord: 4..40
e-value: 1.02474E-14
score: 59.579
IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialGENE3D1.10.1620.20ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialcoord: 3..59
e-value: 1.5E-16
score: 62.2
IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialSUPERFAMILY48690Epsilon subunit of mitochondrial F1F0-ATP synthasecoord: 2..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:343411..343803 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9191.t1Ggra9191.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 343411..343803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9191.t1 ID=Ggra9191.t1|Name=Ggra9191.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=74bp
MVQYWRAAGMTYLKYSTTCAELVRQALKEPIRAQVLNRAGYAMIKGDWDK
GKIVQRTLVEPGATSEVAAAVAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006721ATP_synth_F1_esu_mt
IPR036742ATP_synth_F1_esu_sf_mt