Ggra9224.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9224.t1
Unique NameGgra9224.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length168
Homology
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A2V3IP78 (ATP synthase subunit delta', mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP78_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 9.290e-97
Identity = 149/167 (89.22%), Postives = 157/167 (94.01%), Query Frame = 0
Query:    1 MLSRTALLRRAVARATRFPAPRRMLAEQAIAVEGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGALAMK 167
            ML+R ALLRRA+  A+R   PRRM AEQA+AVEGNKL FNFFLPHDTIKHNA+VDMVI+PASSGLMGILPSHAPTVAQLRSG+VEVHDGE KESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDP AVAKGLS+SEAAVASAKDDLERAEAQIGVDVYMAMQGALAMK
Sbjct:    1 MLARPALLRRAITSASRLSGPRRMFAEQAVAVEGNKLNFNFFLPHDTIKHNAQVDMVIIPASSGLMGILPSHAPTVAQLRSGIVEVHDGEDKESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDPVAVAKGLSESEAAVASAKDDLERAEAQIGVDVYMAMQGALAMK 167          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A1X6NYZ5 (ATP-synt_DE_N domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYZ5_PORUM)

HSP 1 Score: 184 bits (466), Expect = 1.300e-56
Identity = 100/156 (64.10%), Postives = 121/156 (77.56%), Query Frame = 0
Query:   11 AVARATRFPAPRRMLAEQAIAVEGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGALAM 166
            A+AR +     RR +AE   AV  +KL FNFFLP  TI+ +A VDMV+VPASSG+MGILP HAPTVAQLR GVVEVH    K+ YFVSSGFAFVHKDRTD+CAV A  L D+D  AVA+G++D+EAA+A+AK D+E+AEAQIG+D Y AM+ AL M
Sbjct:   11 ALARQSAAGGQRRQMAE---AVAADKLHFNFFLPGGTIQKDAAVDMVLVPASSGVMGILPRHAPTVAQLRPGVVEVHSEGTKDKYFVSSGFAFVHKDRTDVCAVAAAPLSDLDASAVAQGVTDAEAAMAAAKTDMEKAEAQIGLDTYTAMRSALTM 163          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A5J4YVG8 (ATP synthase subunit delta', mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVG8_PORPP)

HSP 1 Score: 157 bits (396), Expect = 8.200e-46
Identity = 85/153 (55.56%), Postives = 109/153 (71.24%), Query Frame = 0
Query:   15 ATRFPAPRRMLAEQAIAVEGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGALAMK 167
            A+R    RRM A+ A A  G KL  NF +P   IK  A VDMV+VPA+ G MGIL  H PTVAQL+ GVV VH G   E YF+SSGFAFV+ + TD+CAV AV + DIDP+ V +GL+++EA++++A D+L RAEAQIG+DV+ AM+ A A K
Sbjct:   26 ASRPAVARRMFADDATAPAG-KLLLNFVVPDKAIKSKAHVDMVVVPATRGEMGILSDHVPTVAQLQPGVVAVHSGSEIEKYFISSGFAFVNPNSTDVCAVSAVSISDIDPEEVKRGLAEAEASMSAASDELARAEAQIGIDVFTAMRDAAAAK 177          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A7J7II58 (ATP synthase subunit delta, mitochondrial n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7II58_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 6.260e-44
Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 0
Query:   29 AIAVEG-NKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEV-HDGEGKESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKD----DLERAE-AQIGVDVYMAMQGALA 165
            A A EG N++  NFF PH  I  N  V  VIVPASSGLMGILP+H PTVAQ+R GVV + H+   +E YFVSSGF FVH DRTD+CAVEAV+L+D+DP+ + K L++ EA +A+A      D +RA  AQIGVDVY+AMQGA++
Sbjct:   36 ATAGEGTNQVTLNFFCPHMVIARNRSVSSVIVPASSGLMGILPNHVPTVAQMRPGVVTIYHEDSKEERYFVSSGFTFVHPDRTDICAVEAVRLEDLDPEEINKALAECEAKLAAASSSGATDAQRAAIAQIGVDVYLAMQGAVS 179          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A7V5I3Z9 (ATP synthase epsilon chain n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5I3Z9_9BACT)

HSP 1 Score: 149 bits (377), Expect = 7.400e-43
Identity = 81/140 (57.86%), Postives = 100/140 (71.43%), Query Frame = 0
Query:   33 EGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEV-HDGEGKESYFVSSGFAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQ------IGVDVYMAMQGALA 165
            E  ++  NFF PH  I  N +V  VIVPA+SGLMGILP+H PTVAQ+R GVV +  DG  +E YFVSSGF FVH DRTD+CAVEAV++ DIDP+ V+K L+D EA +AS+      AEAQ      IGVDVY+AMQG ++
Sbjct:   41 EAGRVTLNFFCPHQVIAKNRQVVSVIVPAASGLMGILPNHVPTVAQMRPGVVTIIGDGGAEERYFVSSGFTFVHPDRTDICAVEAVRVSDIDPEEVSKALADCEAKLASSSAAAGTAEAQRAAVAQIGVDVYLAMQGVVS 180          
BLAST of Ggra9224.t1 vs. uniprot
Match: A4S280 (F-ATPase family transporter: protons (Mitochondrial) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S280_OSTLU)

HSP 1 Score: 145 bits (366), Expect = 2.320e-41
Identity = 78/143 (54.55%), Postives = 101/143 (70.63%), Query Frame = 0
Query:   27 EQAIAVEGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVH-DGEGKESYFVSSGFAFVHKDRT-DLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGALAMK 167
            E++     +KLK NF+LPH+      EVDMV+VPA++G  GILP H PTV+QLR GVV VH + +  + YFVSSGFAFVH D T D+CA+EAV ++ +D DAV KGL++ +A   +AKDD E+A AQIG+DV  AM  AL  K
Sbjct:   28 EESAKGTADKLKLNFYLPHEVAHDEEEVDMVLVPATTGDFGILPGHVPTVSQLRPGVVSVHLNDKDVKKYFVSSGFAFVHADSTADICAIEAVPVEQLDGDAVRKGLAEHQAKFTNAKDDFEKANAQIGIDVCNAMVAALDAK 170          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A7S0PHX0 (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PHX0_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 1.030e-40
Identity = 79/144 (54.86%), Postives = 101/144 (70.14%), Query Frame = 0
Query:   26 AEQAIAVEGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVH-DGEGKESYFVSSGFAFVHKDRT-DLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGALAMK 167
            A +A +    KLK NF++PH       EVDMV+VPA++G  GILP H PTV+QLR GVV VH + +  + YFVSSGFAFVH D T D+CA+EAV ++ +DP+AV KGL+D  A  A AKDD E+A+AQIG+DV  AM  A+  K
Sbjct:   66 AAEATSGTPEKLKLNFYMPHAAPHDGEEVDMVLVPATTGDFGILPGHVPTVSQLRPGVVSVHVNDKDVKKYFVSSGFAFVHADSTADICAIEAVPVEQLDPEAVKKGLADFTAKFAGAKDDFEKAQAQIGIDVCNAMVAAVDAK 209          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A061R2X3 (F-type H+-transporting ATPase subunit delta n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R2X3_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 1.150e-40
Identity = 80/138 (57.97%), Postives = 100/138 (72.46%), Query Frame = 0
Query:   36 KLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKE--SYFVSSGFAFVHKDRT-DLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAK---DDLERAEAQIGVDVYMAMQGALAMK 167
            K+ FNF+LPH  I  N+EVDMV++PA++G  GI+P H P VAQLR GVV VH    KE   YFVSSGFAFVH D + D+CAVEAV +DD+DP A++ GLSD  A +ASA+   D+ E A AQIGVDV+ AM  A++ K
Sbjct:   76 KVSFNFYLPHQVIHQNSEVDMVLLPATTGDFGIMPGHVPVVAQLRPGVVTVHKELDKEVERYFVSSGFAFVHPDSSADVCAVEAVPVDDLDPAAISSGLSDYSAKLASAQSKGDEYEAATAQIGVDVFSAMNSAVSAK 213          
BLAST of Ggra9224.t1 vs. uniprot
Match: M2VWZ2 (F-type H+-transporting ATPase subunit delta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VWZ2_GALSU)

HSP 1 Score: 142 bits (359), Expect = 2.160e-40
Identity = 79/144 (54.86%), Postives = 109/144 (75.69%), Query Frame = 0
Query:   22 RRMLAEQAIAVEGNKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKES-YFVSSGFAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGAL 164
            +R  A+Q +A    KLK +F  P   ++ +A VDMV+ PA++G+MG+LP H PTVAQL+ GVV V + EGKE  YFVSSGFAFV +DRTD+ AVEAV+L+D+D +AV +GLS+ E+A+ SA D++ +A AQIGV+V+ AM+ AL
Sbjct:   20 KRGFADQ-VAQGSEKLKLSFATPTSALRKDASVDMVVFPAATGMMGVLPQHVPTVAQLKPGVVTVIE-EGKEDKYFVSSGFAFVTQDRTDILAVEAVRLEDLDKEAVQRGLSECESAINSASDEVSQAIAQIGVEVHSAMKSAL 161          
BLAST of Ggra9224.t1 vs. uniprot
Match: A0A388K2R4 (ATP-synt_DE_N domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K2R4_CHABU)

HSP 1 Score: 144 bits (362), Expect = 3.090e-40
Identity = 73/133 (54.89%), Postives = 99/133 (74.44%), Query Frame = 0
Query:   35 NKLKFNFFLPHDTIKHNAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKESYFVSSGFAFVHKDRT-DLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEAQIGVDVYMAMQGALAM 166
            +KL FNFF+PH       +VDMVI+PA++G MG+LP H PTVAQLR GV+ VH+G+  + YFVSSGFAF+H + T D+CA+EAV L+D++P+AV  GL+     V  A  +LE+AEA+IGV+V+ AM GAL +
Sbjct:   79 DKLTFNFFMPHAREIDGEQVDMVILPATTGQMGVLPGHVPTVAQLRPGVLSVHEGKETKQYFVSSGFAFIHANSTTDVCAIEAVPLEDLNPEAVKSGLAFYTEQVNRASTELEKAEAEIGVEVHSAMSGALGL 211          
The following BLAST results are available for this feature:
BLAST of Ggra9224.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IP789.290e-9789.22ATP synthase subunit delta', mitochondrial n=1 Tax... [more]
A0A1X6NYZ51.300e-5664.10ATP-synt_DE_N domain-containing protein n=1 Tax=Po... [more]
A0A5J4YVG88.200e-4655.56ATP synthase subunit delta', mitochondrial n=1 Tax... [more]
A0A7J7II586.260e-4459.03ATP synthase subunit delta, mitochondrial n=1 Tax=... [more]
A0A7V5I3Z97.400e-4357.86ATP synthase epsilon chain n=2 Tax=cellular organi... [more]
A4S2802.320e-4154.55F-ATPase family transporter: protons (Mitochondria... [more]
A0A7S0PHX01.030e-4054.86Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A061R2X31.150e-4057.97F-type H+-transporting ATPase subunit delta n=1 Ta... [more]
M2VWZ22.160e-4054.86F-type H+-transporting ATPase subunit delta n=1 Ta... [more]
A0A388K2R43.090e-4054.89ATP-synt_DE_N domain-containing protein n=1 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 131..151
NoneNo IPR availableGENE3D1.20.5.440coord: 123..165
e-value: 3.7E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR13822:SF7ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIALcoord: 16..165
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalGENE3D2.60.15.10coord: 24..122
e-value: 1.3E-24
score: 88.0
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalSUPERFAMILY51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 37..117
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 50..115
e-value: 5.0E-16
score: 58.4
IPR001469ATP synthase, F1 complex, delta/epsilon subunitTIGRFAMTIGR01216TIGR01216coord: 50..151
e-value: 1.1E-20
score: 71.9
IPR001469ATP synthase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 16..165
IPR001469ATP synthase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 35..154
score: 15.03838
IPR001469ATP synthase, F1 complex, delta/epsilon subunitCDDcd12152F1-ATPase_deltacoord: 37..159
e-value: 1.23193E-32
score: 110.679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:422680..423373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9224.t1Ggra9224.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 422680..423373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9224.t1 ID=Ggra9224.t1|Name=Ggra9224.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=168bp
MLSRTALLRRAVARATRFPAPRRMLAEQAIAVEGNKLKFNFFLPHDTIKH
NAEVDMVIVPASSGLMGILPSHAPTVAQLRSGVVEVHDGEGKESYFVSSG
FAFVHKDRTDLCAVEAVKLDDIDPDAVAKGLSDSEAAVASAKDDLERAEA
QIGVDVYMAMQGALAMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036771ATPsynth_dsu/esu_N
IPR020546ATP_synth_F1_dsu/esu_N
IPR001469ATP_synth_F1_dsu/esu