Ggra9239.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9239.t1
Unique NameGgra9239.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length989
Homology
BLAST of Ggra9239.t1 vs. uniprot
Match: A0A2V3ICP2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP2_9FLOR)

HSP 1 Score: 258 bits (658), Expect = 9.180e-73
Identity = 161/369 (43.63%), Postives = 209/369 (56.64%), Query Frame = 0
Query:  578 PSSPTPNPTQGIEQYSHPSFDRRHETPAPTVKTDALPALNQTLQRLTFEDPTISNNQHGQPASVPPPAPH------WQRLNRNTSDLRYQNQP---------NGSSGYANHVQTHPTPGPGTSSYHQTAAPLQSHTPLPNSRHETHQARAIDEKQLYERHVKLANAFSTAFKDTANRYSGNIDDSCPEKRQLFEDIMRNYRATPQEGLEFLNNLFTGTARTFYTNNVLGRVRTYQEAMANLERQFHNETAQERIVAKLESLTFEEFTASDTSANDSLAKLRARIYELFPRAPQPYQSEYNKPRLLAKAVSNQDWATATLYRTTAELPMYADLATSLASVLQKHVARQATSSDTTAKPNEAFYANPRYGR 931
            PS PTP P   I+  +  +   +   P  +V+T    AL Q +QRL FE+       H +P     PAPH        R++RNT D R   +P           +S    +VQTH    P TS+    ++P                        L+ERH KLA AFSTA KD +NRYSGNIDDS PEKR++FED+ +NYR +  E L+FLNNLFTG AR  +   + G+V+ Y  AMA LE++FHN  AQ RI+AKLESL F +FT +D+S ND+  +L  RI E FPR+P   Q +Y+K R+LA AV++Q WA  TL RT  ELP Y+ L+++LASVLQKH +R A         N  FY NPRYGR
Sbjct:  104 PSPPTPAPNAAIDLSASRTPFSQQPYPKTSVQTPQEYALQQAVQRLNFEE------DHPRP-----PAPHATTMPPHSRMDRNTIDFRSNQKPALFNPPVYPQQNSAVHPNVQTH---APNTSN----SSPGXXXXXXXXX---------XXXNNLWERHSKLAVAFSTASKDASNRYSGNIDDSWPEKREMFEDVAQNYRCSKAEALQFLNNLFTGGARVTFRKLIKGQVQDYDTAMAILEKEFHNAPAQARILAKLESLKFTDFTTADSSQNDAYVRLTERIEEQFPRSPPQMQHDYHKRRILACAVADQPWALGTLDRTDEELPTYSTLSSALASVLQKHASRSAAGESVIPHDNGTFYTNPRYGR 445          
BLAST of Ggra9239.t1 vs. uniprot
Match: A0A2V3J1Y4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Y4_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 2.980e-51
Identity = 98/190 (51.58%), Postives = 127/190 (66.84%), Query Frame = 0
Query:  754 LFEDIMRNYRATPQEGLEFLNNLFTGTARTFYTNNVLGRVRTYQEAMANLERQFHNETAQERIVAKLESLTFEEFTASDTSANDSLAKLRARIYELFPRAPQPYQSEYNKPRLLAKAVSNQDWATATLYRTTAELPMYADLATSLASVLQKHVARQATSSDTTAKPNEAFYANPRYGRQTDYRRQWSHNP 943
            +FED+ +NYR +  E L+FLNNLFTG AR  +   + G+V+ Y  AMA LE++FHN  AQ RI+AKLESL F +FT +D+S ND+  +L  RI ELFPR+P   Q +Y+K R+LA AV++Q WA  TL RT  ELP Y+ L+++LASVLQKH +R A         N  FY NPRYGR    RR  + NP
Sbjct:    1 MFEDVAQNYRCSKAEALQFLNNLFTGGARVTFRKLIKGQVQNYDTAMAILEKEFHNAPAQARILAKLESLKFTDFTTADSSQNDAYVRLTERIEELFPRSPPQMQHDYHKRRILACAVADQPWALVTLDRTDEELPTYSTLSSALASVLQKHASRSAAGESVIPHDNGTFYTNPRYGRSKP-RRNEARNP 189          
BLAST of Ggra9239.t1 vs. uniprot
Match: A0A2V3ITK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 172 bits (437), Expect = 7.990e-45
Identity = 99/257 (38.52%), Postives = 148/257 (57.59%), Query Frame = 0
Query:  316 LMSSTAESLQAKTKNKILSVLSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQNMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKSSVVDGDCLRSRQLSYSEHTYRIEFIRTTGLLSSKRELMISDSPDSILCLTDHRGDLIVCAVEIKTVSSLNTINAARQRRQAYAPLTYLPNIGQNEDSIRQFHALVPSSEYRTQCLHHTVSLNLKHALFVQSKGSNCG 572
            L+S+   +   KTK ++++ +S +G     +  K +++EK L     VQ G V L     + ++A ++V   K+KLLE LYK SL SWVMKPLVST GMKEG++NE QVL  L  FF+  +V +     S ++      YR ++IRT GL+SS+  LMISDSPD+++   D +    VCA EIKT++++ T    R   + +     +  +G++ D+      LV S++YR +CLHH V L      FV +K S CG
Sbjct:    5 LVSAETNTPNEKTKTELVAGMSRIGHPISSTQRKGEIVEKILLFLKQVQTGEVVLVENEAEELTAEEQVIAAKKKLLEVLYKRSLNSWVMKPLVSTVGMKEGSLNEKQVLIELSTFFDSHNVQEW---LSTKMKGDTFKYRADYIRTIGLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTEDTRDVSRTFGSSILISGVGRSVDAGLVLQQLVSSTDYRLECLHHAVCLKANKVCFVVAKVSTCG 258          
BLAST of Ggra9239.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 174 bits (441), Expect = 1.240e-40
Identity = 117/355 (32.96%), Postives = 178/355 (50.14%), Query Frame = 0
Query:  224 RFLSEANH-ILQQVTKEAQEKHVVEGVNHEDNIEALAFLIKGKRIDYRPVTFPQGEEELKQCLMSKLIIFSRSMNMQLSCHHTLDEQEHAISSLMSSTAESLQAKTKNKILSVLSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQNMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKSSVVDGDCLRSR----QLSYSEHTYR---IEFIRTTGLLSSKRELMISDSPDSILCLTDHRGDLIVCAVEIKTVSSLNTINAARQRRQAYAPLTYLPNIGQNEDSIRQFHALVPSSEYRTQCLHHTVSLNLKHALF-VQSKGS 569
            RF S   H  L  VT++            E+++ +LA+ ++GK++     T PQ     +Q L  K     +   M+L       E+      L   +   +    +N +  +L         +  K  L+   L+L+  +  GTV+L      ++S +  +  +  K+L+ L + SL +WVMKPLVST GMKEG+ NE +VLKA+P F  K+    G   R+R     + Y+    R   I  I + GL+ SK   MI+DSPD IL   +   +  VCA EIKT+++L T++ A   R+ + PLT L ++G    +   F  L+PS++YR QCLHH  +L LKH LF V S GS
Sbjct:  651 RFTSRTGHSFLATVTRD-----------FENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTR---GAYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTVSEATHLREQFGPLTILSDVGSCGAADELFRTLIPSTQYRAQCLHHAATLGLKHVLFIVASSGS 991          
BLAST of Ggra9239.t1 vs. uniprot
Match: A0A2V3IKW6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKW6_9FLOR)

HSP 1 Score: 139 bits (350), Expect = 1.850e-32
Identity = 98/250 (39.20%), Postives = 129/250 (51.60%), Query Frame = 0
Query:  578 PSSPTPNPTQGIEQYSHPSFDRRHETPAPTVKTDALPALNQTLQRLTFEDPTISNNQHGQPASVPPPAPH------WQRLNRNTSDLRYQNQP---------NGSSGYANHVQTHPTPGPGTSSYHQTAAPLQSHTPLPNSRHETHQARAIDEKQLYERHVKLANAFSTAFKDTANRYSGNIDDSCPEKRQLFEDIMRNYRATPQEGLEFLNNLFTGTARTFYTNNVLGRVRTYQEAMANLERQFHNETA 812
            PS PTP P   I+  +  +   +   P  +V+T    AL Q +QRL FE+       H +P     PAPH        R++RNT D R   +P           +S    +VQTH    P TS+    ++P                        L+ERH KLA AFSTA KD +NRYSGNIDDS PEKR++FED+ +NYR +  E L+FLNNLFTG AR  +   + G+V+ Y  AMA LE++FHN  A
Sbjct:  104 PSPPTPAPNAAIDLSAWRTPFSQQPYPKTSVQTPQEYALQQAVQRLNFEE------DHPRP-----PAPHATTMPPHSRMDRNTIDFRSNQKPALFNPPVYPQQNSAVHPNVQTH---APNTSN----SSPGXXXXXXXXX---------XXXNNLWERHSKLAVAFSTASKDASNRYSGNIDDSWPEKREMFEDVAQNYRCSKAEALQFLNNLFTGGARVTFRKLIKGQVQDYDTAMAILEKEFHNAPA 326          
BLAST of Ggra9239.t1 vs. uniprot
Match: A0A2V3IP41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP41_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 2.270e-23
Identity = 65/152 (42.76%), Postives = 90/152 (59.21%), Query Frame = 0
Query:  316 LMSSTAESLQAKTKNKILSVLSAVGCRQPQSLLKRQLIEKTLELKCSVQNGTVQLALPSMQNMSAAQRVEVKKEKLLEALYKTSLTSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKSSVVDGDCLRSRQLSYSEHTYRIEFIRTTGLLS 467
            L+S+   SL AKTK K+++ +S +G     +L K Q++EK L  +  VQ G + L    ++ +SA + V   K+KLLE LYK SL SWVMKPLVST GMKEG  NE QVL+ LP  F+  +V +     S ++    H YR     TT ++S
Sbjct:    5 LVSAETNSLNAKTKAKLVAAMSRIGHPVSSTLRKAQIVEKILVFRQQVQTGELLLVENEVEELSAEEEVIAAKKKLLEVLYKRSLDSWVMKPLVSTVGMKEGLFNEKQVLRELPTLFDSHNVQEW---LSTKMKGDTHKYRA----TTSVVS 149          
The following BLAST results are available for this feature:
BLAST of Ggra9239.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ICP29.180e-7343.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Y42.980e-5151.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITK47.990e-4538.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKF51.240e-4032.96Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A2V3IKW61.850e-3239.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP412.270e-2342.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..194
NoneNo IPR availableCOILSCoilCoilcoord: 793..813
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 911..988
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 569..715
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 649..705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 972..988
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 950..971

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:471334..494512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9239.t1Ggra9239.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 471334..494512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9239.t1 ID=Ggra9239.t1|Name=Ggra9239.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=989bp
MDYDDAQDAIKNANDQIDLYEDTVETPLSLPGLNENSDEHGHQNAKDDVQ
NDSTLAQTAHNGSKSPSHSQITNNGADQNMSFSFDSEGEETDFVYNPQNK
EGNNEENDSSYSQSEISDQNQTVSEVELRQLAMDNFMNYPEAGVTTSNSI
SARQVTVEDMWSSLFCEDYSLDSLHSAEKTDNEAQREADEARASADGLDD
WEYASPFQSLTIDIDGINRDLGKRFLSEANHILQQVTKEAQEKHVVEGVN
HEDNIEALAFLIKGKRIDYRPVTFPQGEEELKQCLMSKLIIFSRSMNMQL
SCHHTLDEQEHAISSLMSSTAESLQAKTKNKILSVLSAVGCRQPQSLLKR
QLIEKTLELKCSVQNGTVQLALPSMQNMSAAQRVEVKKEKLLEALYKTSL
TSWVMKPLVSTPGMKEGNVNESQVLKALPLFFEKSSVVDGDCLRSRQLSY
SEHTYRIEFIRTTGLLSSKRELMISDSPDSILCLTDHRGDLIVCAVEIKT
VSSLNTINAARQRRQAYAPLTYLPNIGQNEDSIRQFHALVPSSEYRTQCL
HHTVSLNLKHALFVQSKGSNCGPSEPSPSSPTPNPTQGIEQYSHPSFDRR
HETPAPTVKTDALPALNQTLQRLTFEDPTISNNQHGQPASVPPPAPHWQR
LNRNTSDLRYQNQPNGSSGYANHVQTHPTPGPGTSSYHQTAAPLQSHTPL
PNSRHETHQARAIDEKQLYERHVKLANAFSTAFKDTANRYSGNIDDSCPE
KRQLFEDIMRNYRATPQEGLEFLNNLFTGTARTFYTNNVLGRVRTYQEAM
ANLERQFHNETAQERIVAKLESLTFEEFTASDTSANDSLAKLRARIYELF
PRAPQPYQSEYNKPRLLAKAVSNQDWATATLYRTTAELPMYADLATSLAS
VLQKHVARQATSSDTTAKPNEAFYANPRYGRQTDYRRQWSHNPQRNRGRG
AYTGDHRYNSDRNDTRQNHRSNWKPNPRRMYKVRRHYI*
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