Ggra9137.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9137.t1
Unique NameGgra9137.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length296
Homology
BLAST of Ggra9137.t1 vs. uniprot
Match: A0A2V3IHX0 (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHX0_9FLOR)

HSP 1 Score: 421 bits (1082), Expect = 6.420e-146
Identity = 215/279 (77.06%), Postives = 243/279 (87.10%), Query Frame = 0
Query:   21 APPKRGRVQR---PIMAEPIDGGTMPSFPGDE-QKVNYFNAAEQPQQPADEPGLVELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDAGLGTL 295
            APP R R++    P M + +DGGTMPSFP DE Q V +FNA++QP    DE  LVELPLFPLQLVL PAMNLPLHIFELRYRLLFNRLRDGD RFGIVLYD+ TSSLAQVGCSAELTRFEPLPDGRIMTDN+GR+RF+IVKI+D+KPYTRALVRFFDDK P  DLS LV++VS ALQDVLRLSNKLYDK LDLSPDIKRLAP+G+IP TDD GWPSPS++QEFSFSVCQV+D+PL++QQ+LLQ +DTA RL R+ +MLDTARKYLAAQ TIK+AGLG L
Sbjct:   37 APPARKRLRARVAPRMGDSVDGGTMPSFPDDEPQAVQFFNASKQPDS-VDESALVELPLFPLQLVLMPAMNLPLHIFELRYRLLFNRLRDGDARFGIVLYDANTSSLAQVGCSAELTRFEPLPDGRIMTDNVGRRRFEIVKIIDEKPYTRALVRFFDDKAPGGDLSSLVKEVSLALQDVLRLSNKLYDKVLDLSPDIKRLAPNGQIPQTDDSGWPSPSMVQEFSFSVCQVLDMPLKEQQILLQIDDTAARLRRQEKMLDTARKYLAAQVTIKEAGLGQL 314          
BLAST of Ggra9137.t1 vs. uniprot
Match: R7QBJ2 (Lon N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBJ2_CHOCR)

HSP 1 Score: 281 bits (718), Expect = 2.990e-90
Identity = 140/219 (63.93%), Postives = 176/219 (80.37%), Query Frame = 0
Query:   72 ELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPI------TDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQ 284
            ELPLFPL++VL P   +PLH+FELRYRLLFNR+RD D RFGIV+Y+  +SSLA +GC+AELTRFEPLPDGRIMT+NIGR+RF+I++I+++KPYTRA+V    D+ P  DLS L++DV   LQDVLRLSNKLYDK LDLSP+I+RLAP G          T D GWPSP  L++FSF+VCQV+D+PL +QQ+LLQ  +T +RL R+ +ML TAR+YLAAQ
Sbjct:   39 ELPLFPLRMVLNPGTPVPLHVFELRYRLLFNRIRDTDSRFGIVMYNPDSSSLASIGCAAELTRFEPLPDGRIMTNNIGRERFRILRIIEEKPYTRAVVEHVYDETPDEDLSALMEDVWVVLQDVLRLSNKLYDKVLDLSPEIRRLAPGGDADFEGAETRTKD-GWPSPRRLEDFSFAVCQVLDMPLEEQQILLQIRNTGKRLRRQNKMLQTARQYLAAQ 256          
BLAST of Ggra9137.t1 vs. uniprot
Match: A0A7S1TD37 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD37_9RHOD)

HSP 1 Score: 215 bits (547), Expect = 2.030e-65
Identity = 115/223 (51.57%), Postives = 154/223 (69.06%), Query Frame = 0
Query:   72 ELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFF-DDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAP---DGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDA 290
            ELPLFPL LVL P  NLPLHIFE+RYRL+FNR+ DGD RFGIV+YD     +A+VGC AE+ RFEPLPDGRI+T++ G++RF+I++    +PY  A V+   D++ P  ++  L   V   L+DVLRLSNKLYDK + L   I  +AP   D  +    D    +   +Q+FSF V Q++D+ +RDQQL+LQT+ T QRL ++ + L+ AR+YLAAQ  IKDA
Sbjct:   48 ELPLFPLGLVLHPRGNLPLHIFEMRYRLMFNRIWDGDSRFGIVMYDRERDCVARVGCVAEVQRFEPLPDGRILTNSNGKERFRILRYEKKEPYIIATVQAIKDEEDPVDEMVELWHRVWETLKDVLRLSNKLYDKDMSLGETISSVAPPAEDSDVGSLSDSPQETILKVQDFSFCVAQLLDLAIRDQQLMLQTQSTVQRLRKQLKSLNVARQYLAAQVIIKDA 270          
BLAST of Ggra9137.t1 vs. uniprot
Match: A0A5J4YJ93 (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ93_PORPP)

HSP 1 Score: 213 bits (543), Expect = 2.960e-63
Identity = 108/223 (48.43%), Postives = 158/223 (70.85%), Query Frame = 0
Query:   70 LVELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAP--DGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDA 290
            LVELPLFPL LVL P   +PLHIFE+RYR +F ++R+ D  FGIV+YDS+   +A+VGCSAE  + +   DGR++  N G+QRF+I+K++ + PY  ALV +F D+PP  D+      V  +LQ+VLRLSNKLY+KGLD+S ++K+LAP  +     T+++       L++FSF +  ++D+P  +QQ+LLQT DT +RL +++E+LD A++ LAAQ +IK A
Sbjct:  118 LVELPLFPLGLVLYPKALVPLHIFEMRYRRMFGQIREKDNMFGIVMYDSSRKRMARVGCSAECQKVQLQDDGRMLVINQGQQRFRIIKVLQEAPYITALVEYFQDEPPRNDIRQAGAGVWQSLQEVLRLSNKLYNKGLDVSDELKKLAPVEENMTGSTEEQF----KKLEDFSFGIGSILDMPTEEQQILLQTRDTEKRLRKQKELLDAAQQQLAAQISIKSA 336          
BLAST of Ggra9137.t1 vs. uniprot
Match: A0A7J7ID69 (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID69_9RHOD)

HSP 1 Score: 206 bits (524), Expect = 1.300e-60
Identity = 120/276 (43.48%), Postives = 164/276 (59.42%), Query Frame = 0
Query:   45 FPGDEQKVNYFNAAEQPQQPADEP-GLVELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDD--------------KPPHTD-------------LSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQE--FSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDA 290
            F  D   + YF   E  +     P  L ELPLFPL LVL+P   +PLHIFE+RYR +F R+RDGD RFGIV++D   ++ A +G  AE+T +EPLPDGRIMT + GRQRF+++K   + PY   LV +FDD              K P T              L+ L + V  AL DVLRLSNKLY++ + LS  +   +P+           P  +  ++  FSF+V  ++D+P+R QQLLLQT DTA+RL ++ ++L+ AR+YLAAQ TIK+A
Sbjct:  102 FDVDTTAIEYFTPIESAEPTLAGPENLAELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIRDGDGRFGIVMFDKDRNAHATIGTMAEITVYEPLPDGRIMTSSTGRQRFRVLKYTKESPYLVGLVEYFDDESRVESAEQIAAALKEPLTQSGTSGDNGDAEQSLTTLERRVWTALGDVLRLSNKLYNRVVVLSKQVVENSPETXXXXXXXLIDPEQNFHRQKMFSFAVSSILDMPVRQQQLLLQTRDTAKRLLKQAQLLEGARQYLAAQVTIKNA 377          
BLAST of Ggra9137.t1 vs. uniprot
Match: M1V6S3 (Similar to ATP-dependent proteinase BsgA n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6S3_CYAM1)

HSP 1 Score: 205 bits (522), Expect = 2.580e-60
Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 0
Query:   45 FPGDEQKVNYFNAAEQPQQPADEPG-LVELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDK-----------------PPHTD----------LSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQE--FSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDA 290
            F  D   + YF+ +E+        G L ELPLFPL LVL+P   +PLHIFE+RYR +F R+R+GD RFGIV+YD   ++ A VG  AE+  +EPL DGRIMT +IGR+RF+++K   D PY  ALV +FDD+                 P   D          L+ L + V  AL DVLRLSNKLY++ + LS  +   +P+  + I +    P  +  ++  FSF+V  ++D+P+R QQLLLQT  TA+RL ++ ++L+ AR+YLAAQ TIK A
Sbjct:  102 FEEDSTAIEYFSPSEKRDTEVPVSGKLAELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIREGDGRFGIVMYDKDRNAHAAVGTMAEINVYEPLADGRIMTSSIGRERFRVLKYTKDSPYLVALVEYFDDEVCIESVEQILAALKEPLPQSGDQETSRISKQSLTLLERRVWSALGDVLRLSNKLYNRVVSLSKLVVDNSPETVLSIPEGHLDPEQNFHRQKLFSFAVSSILDMPVRQQQLLLQTRSTAKRLLKQAQLLEGARQYLAAQVTIKKA 377          
BLAST of Ggra9137.t1 vs. uniprot
Match: M2VXC5 (ATP-dependent Lon protease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VXC5_GALSU)

HSP 1 Score: 202 bits (513), Expect = 5.890e-60
Identity = 116/242 (47.93%), Postives = 153/242 (63.22%), Query Frame = 0
Query:   52 VNYFNAAEQPQQPAD-EPGLVE--LPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDA 290
            V Y      P    + EP L    LPLFPL LV+ P   +PLHIFE+RYRLLFNR+++GD  FGIVLY+    S+A+ GC  EL RFEPLPDGR++T N+G++RF++  I+ DKP+  A V   +D      +  L + V   L  VL LSNKLY K + LS +++RLAP+   P + DR       L  FS+ V QV+DIP++DQQLLLQT+ T  R   + E+L+ ARK+LAAQ  I DA
Sbjct:   60 VEYIPLTPAPSNVTEQEPALGNRVLPLFPLSLVVQPDATIPLHIFEMRYRLLFNRIKEGDKLFGIVLYNKNNDSVARYGCLMELIRFEPLPDGRMLTVNVGKERFRVNHIIKDKPFITASVVTVEDIDCDDTIFSLGEAVWTDLNQVLSLSNKLYGKNVCLSEELRRLAPN---PESRDR-----HRLIMFSYRVSQVLDIPVQDQQLLLQTQSTKDRFQHQLELLEHARKFLAAQLAINDA 293          
BLAST of Ggra9137.t1 vs. uniprot
Match: U7QF29 (ATP-dependent protease La domain protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=U7QF29_9CYAN)

HSP 1 Score: 174 bits (441), Expect = 3.520e-50
Identity = 95/219 (43.38%), Postives = 134/219 (61.19%), Query Frame = 0
Query:   72 ELPLFPL-QLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKD 289
            ELPLFPL ++VL PA+ LPLHIFE RYR++ N + + D RFG+V++D     +A VGC AE+ + + LPD RI    +G+QRF++++ V +KPY   LV + +D PP  DL PL  +V G L+DV+RLS+KL D+ + L  DI                   PSL  E S+ V   +     +QQ LL+ +DTA RL RE E+L + R +LAA+  +KD
Sbjct:   11 ELPLFPLPEVVLFPAIPLPLHIFEFRYRIMINTILESDSRFGVVMFDPTQGKVASVGCCAEIIQHQRLPDDRIKMITLGQQRFRVLEAVREKPYLVGLVEWIEDVPPQHDLKPLATEVEGLLRDVVRLSSKLMDQSIKLPEDI-------------------PSLPTELSYWVASNLYGVPAEQQALLEMQDTAVRLEREAEILSSTRSHLAAKTVLKD 210          
BLAST of Ggra9137.t1 vs. uniprot
Match: A0A836CM26 (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM26_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.280e-49
Identity = 105/253 (41.50%), Postives = 150/253 (59.29%), Query Frame = 0
Query:   48 DEQKVNYFNAAEQPQQPADEPGLVELPLFPLQLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRF--FDDKPPHTDLSPLVQD----VSGALQDVLRLSNKLYDKG-LDLSPDIKRLAP---DGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDA 290
            ++ +V+YF    +   P+      ELP+FPL LV  P    PLHIFE+RYR L N +   D RFGI+++D  T  +A VG   E+     LPDGR +  NIGR+RFK++++  +KPY   LV     D++P    L   V+     V G LQ+V+RLSNK+YDK  + +S D+ R AP          ++R   S      FSF+V +++DIP R +QL+LQT +  +RL  + E+LD A+K+LAAQAT+KDA
Sbjct:   51 EDTQVSYFTPLSREDTPSPGAKTRELPIFPLSLVTCPNGKCPLHIFEMRYRQLMNNIAGQDNRFGIIMFDPNTQQIAGVGTVVEVVERSLLPDGRQLVMNIGRERFKLLRVTQEKPYMVGLVELGLVDEEPEEGQLLEGVRGSEARVWGLLQEVVRLSNKVYDKTKVTVSEDVARAAPAXXXXXXXXQEERARRSA-----FSFAVTEMLDIPPRAKQLMLQTLNIGERLDYQAELLDKAQKFLAAQATLKDA 298          
BLAST of Ggra9137.t1 vs. uniprot
Match: A0A844MZD1 (ATP-dependent protease n=1 Tax=Scytonema sp. UIC 10036 TaxID=2304196 RepID=A0A844MZD1_9CYAN)

HSP 1 Score: 171 bits (434), Expect = 3.290e-49
Identity = 92/222 (41.44%), Postives = 135/222 (60.81%), Query Frame = 0
Query:   69 GLVELPLFPL-QLVLTPAMNLPLHIFELRYRLLFNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGRQRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSNKLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQEFSFSVCQVIDIPLRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKD 289
             + ELPLFPL ++VL P   LPLHIFE RYR++ N + + D RFG+++ D    ++A VGC AE+T+ + LPDGR+    +G+QRF+++K V +KPY   LV + +DKPP  DL PL  +V   L+DV+RLS KL D+ ++L  D+                   P L  E S+ +   +     +QQ LL+ +DTA+RL RE E+L + R +LAA+  +KD
Sbjct:    8 AVCELPLFPLPEVVLFPTRPLPLHIFEFRYRIMMNTILESDRRFGVLMVDPVRGTIANVGCCAEITQHQRLPDGRMKMWTLGQQRFRLLKYVREKPYRVGLVEWIEDKPPVKDLRPLATEVEQLLRDVVRLSAKLTDQNIELPDDL-------------------PDLPVELSYWIASNLYGVAAEQQALLELQDTAERLERESEILTSTRNHLAARTVLKD 210          
The following BLAST results are available for this feature:
BLAST of Ggra9137.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHX06.420e-14677.06LON peptidase N-terminal domain and RING finger pr... [more]
R7QBJ22.990e-9063.93Lon N-terminal domain-containing protein n=1 Tax=C... [more]
A0A7S1TD372.030e-6551.57Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YJ932.960e-6348.43LON peptidase N-terminal domain and RING finger pr... [more]
A0A7J7ID691.300e-6043.48LON peptidase N-terminal domain and RING finger pr... [more]
M1V6S32.580e-6043.48Similar to ATP-dependent proteinase BsgA n=1 Tax=C... [more]
M2VXC55.890e-6047.93ATP-dependent Lon protease n=1 Tax=Galdieria sulph... [more]
U7QF293.520e-5043.38ATP-dependent protease La domain protein n=4 Tax=C... [more]
A0A836CM261.280e-4941.50PUA-like domain-containing protein n=1 Tax=Tribone... [more]
A0A844MZD13.290e-4941.44ATP-dependent protease n=1 Tax=Scytonema sp. UIC 1... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003111Lon, substrate-binding domainSMARTSM00464lon_5coord: 72..276
e-value: 9.7E-15
score: 65.0
IPR003111Lon, substrate-binding domainPFAMPF02190LON_substr_bdgcoord: 72..275
e-value: 6.2E-20
score: 71.9
IPR003111Lon, substrate-binding domainPROSITEPS51787LON_Ncoord: 73..276
score: 16.266838
NoneNo IPR availableGENE3D2.30.130.40coord: 57..172
e-value: 3.6E-27
score: 96.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availablePANTHERPTHR46732:SF5ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEINcoord: 63..290
NoneNo IPR availablePANTHERPTHR46732ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEINcoord: 63..290
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 72..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:79990..80877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9137.t1Ggra9137.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 79990..80877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9137.t1 ID=Ggra9137.t1|Name=Ggra9137.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=296bp
MRSLVPLRLPPRPPRPPRLHAPPKRGRVQRPIMAEPIDGGTMPSFPGDEQ
KVNYFNAAEQPQQPADEPGLVELPLFPLQLVLTPAMNLPLHIFELRYRLL
FNRLRDGDPRFGIVLYDSATSSLAQVGCSAELTRFEPLPDGRIMTDNIGR
QRFKIVKIVDDKPYTRALVRFFDDKPPHTDLSPLVQDVSGALQDVLRLSN
KLYDKGLDLSPDIKRLAPDGRIPITDDRGWPSPSLLQEFSFSVCQVIDIP
LRDQQLLLQTEDTAQRLTREREMLDTARKYLAAQATIKDAGLGTL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003111Lon_substr-bd
IPR015947PUA-like_sf