Ggra6499.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6499.t1
Unique NameGgra6499.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length247
Homology
BLAST of Ggra6499.t1 vs. uniprot
Match: A0A2V3IP41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP41_9FLOR)

HSP 1 Score: 109 bits (273), Expect = 1.510e-26
Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 0
Query:  129 SALSRKTRANLMAAFSRIGHSVSNSLRKAQVIAKILEIQVNVQNGTLLLQDEQPLSLNEKERLEENSKKLIHSLYKAPLDSRVMKPFVTTPGMKEGSYKESRVLNALPAFFKEHHVQQ 246
            ++L+ KT+A L+AA SRIGH VS++LRKAQ++ KIL  +  VQ G LLL + +   L+ +E +    KKL+  LYK  LDS VMKP V+T GMKEG + E +VL  LP  F  H+VQ+
Sbjct:   11 NSLNAKTKAKLVAAMSRIGHPVSSTLRKAQIVEKILVFRQQVQTGELLLVENEVEELSAEEEVIAAKKKLLEVLYKRSLDSWVMKPLVSTVGMKEGLFNEKQVLRELPTLFDSHNVQE 128          
BLAST of Ggra6499.t1 vs. uniprot
Match: A0A2V3ITK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 92.8 bits (229), Expect = 5.540e-19
Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 0
Query:  132 SRKTRANLMAAFSRIGHSVSNSLRKAQVIAKILEIQVNVQNGTLLLQDEQPLSLNEKERLEENSKKLIHSLYKAPLDSRVMKPFVTTPGMKEGSYKESRVLNALPAFFKEHHVQQ 246
            + KT+  L+A  SRIGH +S++ RK +++ KIL     VQ G ++L + +   L  +E++    KKL+  LYK  L+S VMKP V+T GMKEGS  E +VL  L  FF  H+VQ+
Sbjct:   14 NEKTKTELVAGMSRIGHPISSTQRKGEIVEKILLFLKQVQTGEVVLVENEAEELTAEEQVIAAKKKLLEVLYKRSLNSWVMKPLVSTVGMKEGSLNEKQVLIELSTFFDSHNVQE 128          
BLAST of Ggra6499.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 62.8 bits (151), Expect = 1.290e-7
Identity = 36/113 (31.86%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  129 SALSRKTRANLMAAFSRIGHSVSNSLRKAQVIAKILEIQVNVQNGTLLLQDEQPLSLNEKERLEENSKKLIHSLYKAPLDSRVMKPFVTTPGMKEGSYKESRVLNALPAFFKE 241
            S ++   R +L          +S +  K  ++  +L++Q ++  GT+ L D+   S++    L E + K++  L +A L + VMKP V+T GMKEGS  E  VL A+P+F  +
Sbjct:  739 SRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSK 851          
BLAST of Ggra6499.t1 vs. uniprot
Match: A0A2V3IVJ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ7_9FLOR)

HSP 1 Score: 56.6 bits (135), Expect = 6.300e-6
Identity = 29/70 (41.43%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  129 SALSRKTRANLMAAFSRIGHSVSNSLRKAQVIAKILEIQVNVQNGTLLLQDEQPLSLNEKERLEENSKKL 198
            +AL+  T+A L+AA SRIGH VS++LR+AQ++ KIL  Q  VQ G +++ + +   L+ +E++    KK+
Sbjct:  162 NALNAMTKAELVAAMSRIGHPVSSTLRRAQIVEKILLFQQQVQTGEVVMVENEAEELSAEEQVIAAKKKI 231          
The following BLAST results are available for this feature:
BLAST of Ggra6499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IP411.510e-2650.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITK45.540e-1943.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKF51.290e-731.86Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A2V3IVJ76.300e-641.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:499471..507817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6499.t1Ggra6499.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 499471..507817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6499.t1 ID=Ggra6499.t1|Name=Ggra6499.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=247bp
MRLCRRLTSGAEDNDPKNFSSIRSTVQNQNIHQYVDIVCRNAERDCDFEF
VEGDNYSSTEESSSTMDLIYNPPQNLQNISERELRDLLEDQGTLCARSSL
GCTTSNTTEARSIATEDLWSPVFNTDMDSALSRKTRANLMAAFSRIGHSV
SNSLRKAQVIAKILEIQVNVQNGTLLLQDEQPLSLNEKERLEENSKKLIH
SLYKAPLDSRVMKPFVTTPGMKEGSYKESRVLNALPAFFKEHHVQQ*
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