Ggra6491.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6491.t1
Unique NameGgra6491.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length199
Homology
BLAST of Ggra6491.t1 vs. uniprot
Match: A0A2V3J5C6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C6_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 8.070e-18
Identity = 62/175 (35.43%), Postives = 84/175 (48.00%), Query Frame = 0
Query:    1 MSGRGS-GSRGSGRGITNRGRYHGVRGRILSRGLSRGRGTPHTVPVMSAAD-------------IAMGYPVGTSLNKDPYLVFQNETDKAKSDPLGLVPQNARPELKMLTNWPIP-------------------WFK-------SIPFNPPKRNKEARHRPGRYQCFQHRASHAP 135
            MSGRGS G RGS  G  +         + ++R   RGRGT  T+P+ + +              +A G+P GT +  DPY+V     D +     GL+P + R EL   T+WPIP                   W +       +IP NPPKR++E RHRPGR+ CF HRA H+P
Sbjct:   86 MSGRGSRGPRGSRIGPRS------AINKSVTRPRGRGRGTSQTLPLPNQSGNMPASVSAELVNIVARGFPAGTRVLHDPYVVVATTDDASHMGEFGLLPSDFRRELLQTTSWPIPVSEPLGQPFDHPDFSLYSSWIRWDSHRLAAIPHNPPKRDEETRHRPGRHSCFLHRAHHSP 254          
BLAST of Ggra6491.t1 vs. uniprot
Match: A0A2V3J6V9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V9_9FLOR)

HSP 1 Score: 71.2 bits (173), Expect = 2.150e-11
Identity = 40/111 (36.04%), Postives = 51/111 (45.95%), Query Frame = 0
Query:   51 IAMGYPVGTSLNKDPYLVFQNETDKAKSDPLGLVPQNARPELKMLTNWPIP----------------------W----FKSIPFNPPKRNKEARHRPGRYQCFQHRASHAP 135
            +A G+  GT +  DPY+      D +     GL+P + R EL   T+WPIP                      W      +IP NPPKR+KE RHR GR  CF H A H+P
Sbjct:  144 VAHGFLAGTGVLHDPYVPTATTEDASHMGEFGLLPSDFRRELLQTTSWPIPVSEPLGQPFDHPDFSLYSSGKRWDSHTLAAIPHNPPKRDKETRHRSGRQSCFLHEAHHSP 254          
BLAST of Ggra6491.t1 vs. uniprot
Match: A0A2V3IMH4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMH4_9FLOR)

HSP 1 Score: 66.2 bits (160), Expect = 5.140e-10
Identity = 46/141 (32.62%), Postives = 61/141 (43.26%), Query Frame = 0
Query:   43 VPVMSAAD----IAMGYPVGTSLNKDPYLVFQNETDKAKSDPLGLVPQNARPELKMLTNWPIP----------------------W----FKSIPFNPPKRNKEARHRPGRYQCFQHRASHAPVNTPIAGIGASPAYPGSV 153
            +P  ++AD    +A   P GT +  DPY+      D ++     L+P + R EL   T+WPIP                      W      +I  NPPKR+KE RHR GR+ C  HRA H+P    I      P  PG V
Sbjct:   44 MPAPASADLVNLVAHKLPAGTGVLHDPYVATATTEDASRMGASDLLPSDFRRELLQTTSWPIPVSEPLVQPFDHPDFSLYSSRNRWGSHRLAAILHNPPKRDKEKRHRRGRHSCSLHRAHHSPFRYFIP-----PTIPGDV 179          
The following BLAST results are available for this feature:
BLAST of Ggra6491.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5C68.070e-1835.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6V92.150e-1136.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMH45.140e-1032.62Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:392506..394505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6491.t1Ggra6491.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 392506..394505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6491.t1 ID=Ggra6491.t1|Name=Ggra6491.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=199bp
MSGRGSGSRGSGRGITNRGRYHGVRGRILSRGLSRGRGTPHTVPVMSAAD
IAMGYPVGTSLNKDPYLVFQNETDKAKSDPLGLVPQNARPELKMLTNWPI
PWFKSIPFNPPKRNKEARHRPGRYQCFQHRASHAPVNTPIAGIGASPAYP
GSVSPSGDHGDPSQGGTPAILPPPSSGGGYSAGIPATLNDTAMGESYQ*
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