Ggra6452.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6452.t1
Unique NameGgra6452.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length218
Homology
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A2V3IGW0 (Rho GTPase-activating protein gacY n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGW0_9FLOR)

HSP 1 Score: 267 bits (683), Expect = 3.990e-88
Identity = 122/201 (60.70%), Postives = 160/201 (79.60%), Query Frame = 0
Query:    8 DEPYEREVQQVRNADLSAIDNRGIVTVVRDSDGSLTHDTDGNALVMVIPALIPRIGGTVWEQCFQLFVRETVDICDQAYRLIYVHSGFSPPFWLGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEENEMMREAIVALGVPVEPRQ 208
            D  YEREV+    ADLS ++N+G+VTV+R+ DGSL  D +GNA+VMVIPAL+P  G  VWE+CF+LF+RET DIC   YR++YVHS FS P W+ WWLIR+R RLSR H+KNL+A++IVHPSL++RVI   LS  + ++ WRK+H+ DR+EELWLD VL++EV  R+IP GVA+FEE LVEENEMMR+  ++LGVP+E R+
Sbjct:    6 DSAYEREVENANEADLSEVENKGVVTVIREDDGSLIADNEGNAIVMVIPALVPH-GDGVWEKCFKLFLRETKDICGSGYRVLYVHSAFSSPVWMAWWLIRMRGRLSRMHKKNLKAVTIVHPSLSVRVICVALSAVLRESFWRKLHYADRVEELWLDGVLSREVVTRVIPAGVAVFEEALVEENEMMRDEAISLGVPLERRE 205          
BLAST of Ggra6452.t1 vs. uniprot
Match: R7Q4P8 (CRAL-TRIO domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4P8_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 1.180e-25
Identity = 49/108 (45.37%), Postives = 74/108 (68.52%), Query Frame = 0
Query:  101 LGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEENEMMREAIVALGVPVEPRQ 208
            + WWL+ +R RLSR HRKNL  ++IVHPS+ +R+++  +   +    W+K+H+VDR+EELWLDE++ + VA R IP  V  +E+ +VEE E  R   +ALG P+  R+
Sbjct:    1 MSWWLLSLRLRLSRGHRKNLCGLTIVHPSVWVRLLFLGMRPVLGAGFWKKLHYVDRIEELWLDEMMEEGVARRNIPQAVFGYEQKIVEEAEESRNLAIALGAPLAARE 108          
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A5J4YML2 (Rho GTPase-activating protein gacY n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YML2_PORPP)

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-13
Identity = 57/200 (28.50%), Postives = 90/200 (45.00%), Query Frame = 0
Query:    9 EPYEREVQQVRNADLSAIDNRGIVTVVRDSDGSLTHDTDGNALVMVIPALIPRIGGTVWEQCFQLFVRET------------VDICDQAYRLIYVHSGFSPPFWLGW-------WLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEE 189
            E Y R +++ R A+L  I+   +  VV D       D  G  ++MV  + +             LF+R              +D   + Y +I+ H+       +GW       + IR    L   ++KNL  +SIVHP + +R ++ ++  F+S   W K+H+ DRL+ELWLD VL +   E  +P     FEE L  E
Sbjct:   50 EEYLRVLEEARAANLEHIEALNVFEVVED-------DGHGRPVMMVHGSRLDT-WNVDMHDVLLLFIRLLHPCVFGPGADIELDDSSRQYSVIFFHTN------MGWRNQPSVAFAIRAYRLLPTAYKKNLAHLSIVHPGVWVRGVFLIMRPFLSSKFWAKLHYADRLDELWLDGVLNKHALEAHVPPEARRFEEALRHE 235          
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A7S0G761 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G761_9RHOD)

HSP 1 Score: 66.2 bits (160), Expect = 7.040e-10
Identity = 47/163 (28.83%), Postives = 77/163 (47.24%), Query Frame = 0
Query:   11 YEREVQQVRNADLSAIDNRGIVTVVRDSDGSLTHDTDGNALVMVIPALIPRIGGTVWEQCFQLFVRETVDICDQAYRLIYVHSGFSPPFWLGW-WLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELWLDEVLTQEVAE 172
            Y   V + R  +L+ ++  G + V          D  G  LV+V    +  I     +  F  ++RE  +I    Y L+Y +S  +        WLI +  +L   +RKN+   SIVHPS + R +   +  F+S   W+K+HF D  +EL+LD ++ + V E
Sbjct:   12 YRELVAKARETNLADVEVLGHLDVSH-------KDALGRPLVVVYGRRL-TIREVNMQNVFLHYIREMDEIASDDYTLVYFNSKVTRANLPSTGWLIHMYRKLPYRYRKNVAHFSIVHPSFSTRFLVYTMYPFLSSKAWKKLHFSDHPDELFLDGLVARGVIE 166          
BLAST of Ggra6452.t1 vs. uniprot
Match: D8RDF5 (Uncharacterized protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RDF5_SELML)

HSP 1 Score: 66.6 bits (161), Expect = 3.040e-9
Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   45 DTDGNALVMVIPALIPRIGGTVWEQCFQL------FVRETVDICDQAYRLIYVHSGFS----PPFWLGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELW 161
            D DG  +++V+       G     +C  L       V+E   +  ++Y ++Y+HS  S    P   LGW + R++  L R H++NL AI ++HP++ L+     L   V Q VW+KV +V+RL +L+
Sbjct:  399 DADGKPVIVVV-------GAHFLLRCLDLERFILYVVKEFEPVIQRSYTIVYIHSAASLQAVPD--LGW-IKRIQQILGRRHKRNLNAIYVLHPTVGLKTAILALQLLVDQEVWKKVVYVERLLDLF 515          
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A1Y2G7I9 (Rho GTPase activation protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G7I9_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 1.070e-6
Identity = 41/170 (24.12%), Postives = 75/170 (44.12%), Query Frame = 0
Query:   45 DTDGNALVMVIPALIPRIGGTVWEQCFQLFVRETVDICDQAYRLIYVHSG--FSPPFWLGW-WLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEENEMMREAIVALGVPVEPRQLGP 211
            D +   +V++    +P      ++   ++ + +     +  Y ++    G  + P    GW WL      L+R H+KNL+A+ IVHPS   R+I   +++ +S     KVH++D L +L     L Q      +      FE+ +    +    A    G P++ R +GP
Sbjct:   14 DYESRPMVVICACNLPDPAVVDYDTILRIVLAQLEQFVENDYTVVMFSGGALYRP----GWKWLFTAYRSLNRNHKKNLKALYIVHPSTWPRLILGTMNSIISPKFGAKVHYIDTLSQLATVVPLNQINIPAAVYKHNLKFEDTITLPEDQQDHANRVFGAPLD-RLMGP 178          
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A6B2LRL2 (CRAL-TRIO domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LRL2_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 1.090e-6
Identity = 30/91 (32.97%), Postives = 49/91 (53.85%), Query Frame = 0
Query:   68 EQCFQLFVRETVDICDQAYRLIYVHSGFS----PPFWLGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFV 154
            ++ F  F +    +  Q Y LIYVH+  S    P F    WL +  +  SR+++KNL+ + +VHP+  ++ +  L   FVS   W+K H+V
Sbjct:   13 DRLFLYFQKIMDPLVAQDYVLIYVHTNVSSENIPKFG---WLRKCYSTFSRQYKKNLKELFVVHPTSLIKSMVKLFKPFVSTKFWKKFHYV 100          
BLAST of Ggra6452.t1 vs. uniprot
Match: F4Q5Y1 (CRAL-TRIO domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q5Y1_CAVFA)

HSP 1 Score: 58.2 bits (139), Expect = 1.240e-6
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 0
Query:   86 YRLIYVHSGF---SPPFWLGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWR-KVHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEENEMMREAIVALGV 202
            Y +IY H G    S P     WL++    L R ++KNL+   I+HPS  L+V++ ++S F+S+ VWR KV ++D L+EL   + L + + +  IP  V   ++ L+ + E+    + ++ V
Sbjct:   87 YSIIYSHHGLAQESTPDRA--WLLKTYQLLPRNYKKNLKHFYILHPSTWLKVLFMMMSPFLSEKVWRHKVVYLDYLQEL--PDTLDRALIKSKIPHIVKEHDKQLLAQPEVAETVMSSMEV 203          
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A150GPH9 (CRAL-TRIO domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GPH9_GONPE)

HSP 1 Score: 56.6 bits (135), Expect = 2.310e-6
Identity = 49/173 (28.32%), Postives = 78/173 (45.09%), Query Frame = 0
Query:   44 HDTDGNALVMVIPALIPRIGGTVWEQCFQLFVRETVDICDQAYRLIYVHSGFSPPFWLGW----WLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEENEMMREAIVALGVPVEPRQLGPV 212
             D++G  LV V+    P     V      L  R      D  Y +++ H+  S  +W       W+ R   RL  ++R NL  + +VH  L L +    L    S+++WRKV +V R+E LW + V  +++A   +P  VA  + VL ++  M    + +  V   P   GPV
Sbjct:   32 RDSEGRPLVTVVSRNFPAKVLNVERVYRYLITRLDAVAEDGPYSVVWFHTCAS--YWQNCPSVAWMWRTYERLPCKYRSNLHRMFVVHCDLPLWLGLAALGPLCSEDLWRKVEWVSRVEFLW-EHVPKKQLA---LPDFVAEHDSVLEDQPLMDYGLVASKEVAQVPGLPGPV 198          
BLAST of Ggra6452.t1 vs. uniprot
Match: A0A336KCS4 (CSON007345 protein n=1 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336KCS4_CULSO)

HSP 1 Score: 57.4 bits (137), Expect = 3.920e-6
Identity = 34/100 (34.00%), Postives = 51/100 (51.00%), Query Frame = 0
Query:   66 VWEQCFQLFVRETVDICDQAYRLIYVHSGFS----PPFWLGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRKVHFVDRLEELW 161
            V    F   ++    +    Y LIY H G +    PPF    WL +    + R  RK+L+ + +VHPS  L+ +  +L  FVS   WRK+ +V+ LEEL+
Sbjct:  352 VMTNLFLYVIKTLQQLITDDYILIYFHGGSNKNNVPPFR---WLKKCYQLIDRRLRKSLKNMYLVHPSFWLKSMVWMLRPFVSAKFWRKLVYVNTLEELY 448          
The following BLAST results are available for this feature:
BLAST of Ggra6452.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IGW03.990e-8860.70Rho GTPase-activating protein gacY n=1 Tax=Gracila... [more]
R7Q4P81.180e-2545.37CRAL-TRIO domain-containing protein n=1 Tax=Chondr... [more]
A0A5J4YML21.300e-1328.50Rho GTPase-activating protein gacY n=1 Tax=Porphyr... [more]
A0A7S0G7617.040e-1028.83Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
D8RDF53.040e-931.50Uncharacterized protein n=4 Tax=Selaginella moelle... [more]
A0A1Y2G7I91.070e-624.12Rho GTPase activation protein n=1 Tax=Lobosporangi... [more]
A0A6B2LRL21.090e-632.97CRAL-TRIO domain-containing protein n=1 Tax=Arcell... [more]
F4Q5Y11.240e-632.23CRAL-TRIO domain-containing protein n=1 Tax=Cavend... [more]
A0A150GPH92.310e-628.32CRAL-TRIO domain-containing protein n=1 Tax=Gonium... [more]
A0A336KCS43.920e-634.00CSON007345 protein n=1 Tax=Culicoides sonorensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 53..183
e-value: 1.4E-20
score: 73.9
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 44..161
e-value: 2.1476E-6
score: 43.913
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 23..165
e-value: 8.0E-18
score: 66.5
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 101..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:163350..164092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6452.t1Ggra6452.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 163350..164092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6452.t1 ID=Ggra6452.t1|Name=Ggra6452.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=218bp
MSERALADEPYEREVQQVRNADLSAIDNRGIVTVVRDSDGSLTHDTDGNA
LVMVIPALIPRIGGTVWEQCFQLFVRETVDICDQAYRLIYVHSGFSPPFW
LGWWLIRVRNRLSREHRKNLQAISIVHPSLTLRVIYTLLSTFVSQNVWRK
VHFVDRLEELWLDEVLTQEVAERIIPGGVAMFEEVLVEENEMMREAIVAL
GVPVEPRQLGPVEEDVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf