Ggra6497.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6497.t1
Unique NameGgra6497.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length265
Homology
BLAST of Ggra6497.t1 vs. uniprot
Match: A0A2V3IFB5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFB5_9FLOR)

HSP 1 Score: 263 bits (672), Expect = 3.980e-84
Identity = 134/257 (52.14%), Postives = 185/257 (71.98%), Query Frame = 0
Query:    1 MASTGKSSMFLRVLASTYEPPSSKRKPQLMARGYATFVAIDPASKRPRALPSTSISKSPADRSQVSHIRLLLEEEEAEPGLSASFATQRRQLREGSSPERQLDSLEALRSISFDRIMDVSETEIIIRKHFLPRNENHGGVVFGGDILETFENAALSCASRMQQKPMRTRAIRSISFLTAVQRRSMLHVKATVIASTSQFVVVLIRSFIDQESNRFSLQPSHFGVFYLSSQDSKEIEVGVRAWETTYDDELHRVLSLP 257
            + S G+SSM LR+LA+ Y P +S  KP+++A  YATF+A+D  +KRPR LP T+   +   +    H+RL+ +E++    L  SF+ QR+QL   S+P+R   +++ L++ISF +++ V +TE+ IRKHFLPRN+N  G++FGGDIL TFE AAL+CASRMQ + M T A RSI+FL  VQ  S+LHV A V+A T + VVVL+RS++DQE NRF LQPSH GVFYL + D + +EVGV AW T ++D+LHRVL LP
Sbjct:   56 VVSIGRSSMVLRLLATHYLPSTSNAKPEVIASAYATFIAVDTKTKRPRLLPPTATPITQPSQHDEPHLRLISQEQQLSRTLLDSFSVQRKQLSVNSTPQRDEHAIKYLQTISFKKVLHVDQTEVTIRKHFLPRNQNQAGLIFGGDILSTFEQAALTCASRMQSRRMVTVATRSIAFLAPVQPLSLLHVVARVVACTGELVVVLVRSYVDQEHNRFELQPSHQGVFYLRAADWQPVEVGVHAWNTAHEDDLHRVLPLP 312          
BLAST of Ggra6497.t1 vs. uniprot
Match: A0A7S1E4F5 (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E4F5_HEMAN)

HSP 1 Score: 67.4 bits (163), Expect = 3.550e-9
Identity = 62/205 (30.24%), Postives = 101/205 (49.27%), Query Frame = 0
Query:   34 YATFVAIDPASKRPRALPSTSISKSPAD--RSQVSHIRLLLEEEEAEPGLSASFATQRRQLREGSSPERQLDSLEALRSISFDRIMDVSETEIIIRKHFLPRNENHGGVVFGGDILETFENAALSCASRMQQKP-MRTRAIRSISFLTAVQRRSMLHVKATVIASTSQF------VVVLIRSFIDQESNRFSLQPSHFGVFYLSS 229
            + TFVA+ P  KRP  +P+        +  R+ +    LL E+ EAE       A Q+     G+  +   D++        +  + + +T +++RK+FLPR  NH G VFGGD+LE  ++AA++CAS   + P M T A+  + F   ++   +L +KA V  S          V VL   F D+   + ++  SH G F++ S
Sbjct:  194 FVTFVALGP-DKRPTIVPTLETGSEEEEELRAFLQARSLLNEQYEAE-----QIAMQQ----PGALDKFTPDAVNK----GHNEYVRMKDTTLMLRKNFLPRALNHLGTVFGGDLLEWMDSAAVACASHFTRNPHMITIAMDRVFFHKPIRPTDVLELKAVVAYSRRHCINVEVQVDVLTPPFADKSDEKLAINRSHRGRFHVLS 384          
BLAST of Ggra6497.t1 vs. uniprot
Match: K3X0V0 (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0V0_GLOUD)

HSP 1 Score: 57.8 bits (138), Expect = 4.860e-6
Identity = 42/140 (30.00%), Postives = 69/140 (49.29%), Query Frame = 0
Query:  114 DRIMDVSETEIIIRKHFLPRNENHGGVVFGGDILETFENAALSCASRM-QQKPMRTRAIRSISFLTAVQRRSMLHVKATVIASTSQFVVVLIRSFIDQESNRFSLQPSHFGVFYLSSQDSKE----IEVGVRAWETTYDD 248
            D  + VS+TEI +RK FLP+N N    +FGGD+L   +NAA+ CA    + + M T ++  I F   +   +++ VKA +       + V +  F+        ++ SH G F + + D  +    I  G+   E+  DD
Sbjct:  178 DEYVSVSDTEIEVRKRFLPKNLNVMNTLFGGDLLSWMDNAAIYCARHFTKNERMVTMSMNRILFKLPILASNIVTVKARIANVRRTCLEVEVEVFVSTPGES-DMKKSHTGYFMVLNVDELDNPMRINKGLLVDESKQDD 316          
BLAST of Ggra6497.t1 vs. uniprot
Match: A0A5D6YG74 (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YG74_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 5.100e-6
Identity = 53/174 (30.46%), Postives = 89/174 (51.15%), Query Frame = 0
Query:   71 LLEEEEAEPGLSA-SFATQRRQLREGSSPERQLDSLEALRSISFDRI----------MDVSETEIIIRKHFLPRNENHGGVVFGGDILETFENAALSCA-SRMQQKPMRTRAIRSISFLTAVQRRSMLHVKATVIASTSQFVVVLIRSFIDQESNRFSLQPSHFGVFYLSSQDS 232
            L ++E+AE  LS    A QR++L   +   R+ D ++AL  ++ D +          + VSETEI++R  FLPRN N    +FGGD+L   + AAL CA S  + + M T  +  + F   +    ++ +KA V       + V +  F+D  +++   + SH G F + + D+
Sbjct:  147 LFDDEQAEYCLSMRETAKQRKEL--AARWRREQDDVDALPRVTADMLQLPPQDKEAYVAVSETEIVVRNWFLPRNLNVNETLFGGDLLAWMDKAALYCAKSFTKSERMVTIGMNRVLFKLPILATDVVTLKARVTNVRRFRLEVEVEVFVDP-ADQSGTRKSHTGYFTVLNVDA 317          
The following BLAST results are available for this feature:
BLAST of Ggra6497.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IFB53.980e-8452.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1E4F53.550e-930.24Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
K3X0V04.860e-630.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6YG745.100e-630.46Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 1..64
e-value: 5.0E-5
score: 25.0
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 103..253
e-value: 8.0E-15
score: 56.9
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 138..205
e-value: 3.2E-4
score: 21.0
IPR040170Cytosolic acyl coenzyme A thioester hydrolasePANTHERPTHR11049ACYL COENZYME A THIOESTER HYDROLASEcoord: 3..252
IPR033120Hotdog acyl-CoA thioesterase (ACOT)-type domainPROSITEPS51770HOTDOG_ACOTcoord: 120..233
score: 15.578279
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 3..52
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 116..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:457137..458043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6497.t1Ggra6497.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 457137..458043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6497.t1 ID=Ggra6497.t1|Name=Ggra6497.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=265bp
MASTGKSSMFLRVLASTYEPPSSKRKPQLMARGYATFVAIDPASKRPRAL
PSTSISKSPADRSQVSHIRLLLEEEEAEPGLSASFATQRRQLREGSSPER
QLDSLEALRSISFDRIMDVSETEIIIRKHFLPRNENHGGVVFGGDILETF
ENAALSCASRMQQKPMRTRAIRSISFLTAVQRRSMLHVKATVIASTSQFV
VVLIRSFIDQESNRFSLQPSHFGVFYLSSQDSKEIEVGVRAWETTYDDEL
HRVLSLPTFENMRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_dom
IPR040170Cytosol_ACT
IPR033120HOTDOG_ACOT
IPR029069HotDog_dom_sf