Ggra6506.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6506.t1 vs. uniprot
Match: A0A2V3J578 (DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J578_9FLOR) HSP 1 Score: 263 bits (673), Expect = 2.750e-88 Identity = 129/144 (89.58%), Postives = 137/144 (95.14%), Query Frame = 0
Query: 32 MIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLGRLD 175
M+EVEGTFAGRFGFIVAVLKVEG+IPVAELDD+TGFA+FPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDM Y++ + EP WKGSEPEDDI KD +VRLRIIGLKIEATEISATATIQDPYLGRLD
Sbjct: 1 MLEVEGTFAGRFGFIVAVLKVEGDIPVAELDDNTGFAVFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMNYKFID-DEPTWKGSEPEDDIVKDVSVRLRIIGLKIEATEISATATIQDPYLGRLD 143
BLAST of Ggra6506.t1 vs. uniprot
Match: A0A1X6NKR0 (S1 motif domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKR0_PORUM) HSP 1 Score: 202 bits (513), Expect = 1.640e-63 Identity = 98/173 (56.65%), Postives = 130/173 (75.14%), Query Frame = 0
Query: 3 FFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLGRLD 175
FF++ L RR+ + P+ F A L + LT+RLM EVEG+FAGR GF++ V+ + IP ELD +TGFA+FPL Y+A+VFRPFKGEVLDSVV KVT+HGFFA+ GPL +FVSH+ +P DM Y + Q W+ + D I +D +VRLRI+GLKIEATEISAT +++D YLG ++
Sbjct: 2 FFLVDLERRIHMPPRQFNAKLTDSLTQRLMQEVEGSFAGRHGFVIMVVHLHEPIPHGELDHTTGFAVFPLKYKALVFRPFKGEVLDSVVDKVTQHGFFADAGPLKIFVSHHLLPQDMGY---DAQAECWRSVDGGDLIARDASVRLRILGLKIEATEISATGSVRDDYLGTVE 171
BLAST of Ggra6506.t1 vs. uniprot
Match: A0A7S3E9V8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E9V8_9RHOD) HSP 1 Score: 197 bits (502), Expect = 1.050e-60 Identity = 95/172 (55.23%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPFFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLG 172
M FFV+ L + +Q+HP+FF ASL + L +RL+ EVEG FAGR GFIV V K+E IPV E+D STGFA+FP+ Y A+VFRPF+GEVLDS+VT+V HGF A GPL +FVSH+ +PSDM Y + Q W D I+ TAVRL++IGLK+EAT++ AT ++++ +LG
Sbjct: 78 MGFFVVKLVKDLQVHPRFFNASLSDTLKQRLISEVEGQFAGRHGFIVIVQKIEEPIPVGEIDSSTGFAVFPIKYHALVFRPFRGEVLDSIVTRVLPHGFLASAGPLDIFVSHHCLPSDMKY---DQQGECWVSINQADKIETKTAVRLKLIGLKVEATKMHATGSMKEDFLG 246
BLAST of Ggra6506.t1 vs. uniprot
Match: A0A7S0BQA4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQA4_9RHOD) HSP 1 Score: 193 bits (491), Expect = 4.400e-60 Identity = 94/172 (54.65%), Postives = 125/172 (72.67%), Query Frame = 0
Query: 1 MPFFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLG 172
M FFV+ L + +Q+HP+FF ASL + L +RL+ EVEG FAGR GFIV V K+E IPV E+D STGFA+FP+ Y A+VFRPF+GEVLDS+VT+V GF A GPL +FVSH+ +PSDM Y + Q W D I+ TAVRL++IGLK+EAT++ AT ++++ +LG
Sbjct: 1 MGFFVVKLVKYLQVHPRFFNASLSDTLKQRLISEVEGQFAGRHGFIVIVQKIEEPIPVGEIDSSTGFAVFPIKYHALVFRPFRGEVLDSIVTRVLPLGFLASAGPLDIFVSHHCLPSDMKY---DQQGECWVSINQADKIENKTAVRLKLIGLKVEATKMLATGSMKEDFLG 169
BLAST of Ggra6506.t1 vs. uniprot
Match: A0A7S1ERI9 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERI9_9RHOD) HSP 1 Score: 187 bits (476), Expect = 6.670e-58 Identity = 89/170 (52.35%), Postives = 128/170 (75.29%), Query Frame = 0
Query: 3 FFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLG 172
++VL L RRVQI P+ F ++++ + ++L+ +VEG FAG GF+VAV+ + +P +LDD TGFAIFP+ Y A+V+RPFK EV+D++V++VT+HGFFAE GPLT+FVSH+ IP DM YQ + E + ++ + I +DT VRL+IIGLKIE T+ISAT +++D YLG
Sbjct: 2 YYVLQLQRRVQIEPRLFNRNIEQTIIQKLINDVEGKFAGGNGFVVAVINLVHGVPSGQLDDGTGFAIFPVTYNAIVYRPFKNEVVDAIVSRVTQHGFFAEAGPLTIFVSHHLIPEDMAYQ--SMPEG-FVSTDQGETITRDTKVRLKIIGLKIEVTDISATGSMRDDYLG 168
BLAST of Ggra6506.t1 vs. uniprot
Match: M2WSF9 (DNA-directed RNA polymerase II subunit G n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WSF9_GALSU) HSP 1 Score: 178 bits (451), Expect = 4.440e-54 Identity = 89/175 (50.86%), Postives = 123/175 (70.29%), Query Frame = 0
Query: 1 MPFFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLGRLD 175
M FF + L + V++HP+ F + L+E L + LM EVEGT +GRFGF+V+VL+V +P L + GFA++PL Y+A+VFRPFKGEVLD+VVT VT HG FA+ GPLT+FVS + IPSDMT+ E E + IQ+D+A+RLR+ G+KI+A+ +A TI D YLG ++
Sbjct: 1 MGFFQVELTKNVRVHPRHFHSKLKETLIQTLMDEVEGTVSGRFGFVVSVLEVLQPLPKGILREGFGFAVYPLKYKALVFRPFKGEVLDAVVTNVTRHGIFAQVGPLTIFVSRHQIPSDMTHD--EETASYISVVEKAERIQRDSAIRLRVNGIKIDASSFTAVGTILDDYLGLIE 173
BLAST of Ggra6506.t1 vs. uniprot
Match: B9GGV6 (Uncharacterized protein n=5 Tax=Saliceae TaxID=238069 RepID=B9GGV6_POPTR) HSP 1 Score: 171 bits (434), Expect = 1.850e-51 Identity = 85/170 (50.00%), Postives = 120/170 (70.59%), Query Frame = 0
Query: 3 FFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLG 172
FF +VL R +Q+HP+FFG +L+E + +LM +VEGT +GR GF+VA+ +E I + D TGF FP+ YQ VVFRPFKGE+L++VVT V + GFFAE GP+ +FVS++ IP DM +Q ++ P + S+ IQKD+ VRL+IIG +++ATEI TI+D +LG
Sbjct: 2 FFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIEN-IGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQTGDM--PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLG 168
BLAST of Ggra6506.t1 vs. uniprot
Match: RPB7 (DNA-directed RNA polymerase II subunit RPB7 n=73 Tax=Eukaryota TaxID=2759 RepID=RPB7_SOYBN) HSP 1 Score: 170 bits (431), Expect = 5.280e-51 Identity = 85/170 (50.00%), Postives = 120/170 (70.59%), Query Frame = 0
Query: 3 FFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLG 172
FF +VL R +Q+HP++FG +L++ L +LM +VEGT +GR GF+VAV +E I + D TGF FP+ YQ VVFRPFKGE+L++VVT V + GFFAE GP+ +FVS++ IP DM +Q ++ P + S+ IQKD+ VRL+IIG +++ATEI TI+D +LG
Sbjct: 2 FFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIEN-IGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDM--PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLG 168
BLAST of Ggra6506.t1 vs. uniprot
Match: M4CR91 (Uncharacterized protein n=9 Tax=Brassica TaxID=3705 RepID=M4CR91_BRARP) HSP 1 Score: 168 bits (426), Expect = 3.120e-50 Identity = 83/170 (48.82%), Postives = 119/170 (70.00%), Query Frame = 0
Query: 3 FFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLG 172
FF +VL R +Q+HP+FFG +L+E L +L+ +VEGT +GR GF++AV +E I + D T F FP+ Y+ VVFRPF+GEVL++VVT+V +HGFFAE GPL +FVS++ IP DM YQ ++ P + S+ IQ+D VRL++ G I+ATEIS +I++ +LG
Sbjct: 2 FFHIVLERNMQLHPRFFGQNLRENLVSKLIKDVEGTISGRHGFVLAVTGIES-IGKGLIRDGTPFVTFPVKYRCVVFRPFEGEVLEAVVTRVVQHGFFAEAGPLKIFVSNHCIPDDMEYQAGDM--PTYTKSDGSVRIQEDCEVRLKVFGFSIDATEISCVGSIKERFLG 168
BLAST of Ggra6506.t1 vs. uniprot
Match: A0A1Y1I9G3 (DNA-directed RNA polymerase II subunit 7 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9G3_KLENI) HSP 1 Score: 168 bits (426), Expect = 3.120e-50 Identity = 87/172 (50.58%), Postives = 120/172 (69.77%), Query Frame = 0
Query: 3 FFVLVLNRRVQIHPKFFGASLQEILTKRLMIEVEGTFAGRFGFIVAVLKVEGEIPVAELDDSTGFAIFPLAYQAVVFRPFKGEVLDSVVTKVTEHGFFAECGPLTVFVSHYSIPSDMTYQYKELQEPMWKGSEPEDDIQKDTAVRLRIIGLKIEATEISATATIQDPYLGRL 174
FF +VL R + +HP+FFG L++ LT +L+ +VEG G+ GFIVAV V+ + E+ TG FP++Y A+VFRPFKGEVL+ VVT+V + GFFAE GPL VFVS++ IP D+T+ QEP +K E IQK+T VRL+I+G++I+AT ISA TI+D +LG +
Sbjct: 2 FFHIVLERTMLLHPRFFGPKLRDTLTHQLLQDVEGRCDGKNGFIVAVTNVDPKGS-GEITSGTGMVKFPVSYNALVFRPFKGEVLECVVTQVFKMGFFAEAGPLQVFVSNHLIPDDLTFD--STQEPCFKSDTGEWRIQKETEVRLKIVGMRIDATNISAIGTIKDDFLGEI 170 The following BLAST results are available for this feature:
BLAST of Ggra6506.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6506.t1 ID=Ggra6506.t1|Name=Ggra6506.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=176bpback to top |