Ggra6492.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6492.t1
Unique NameGgra6492.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length189
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:416672..417238 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6492Ggra6492Gracilaria gracilis GNS1m malegenetig00000074_pilon 416672..417238 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6492.t1.stop1Ggra6492.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000074_pilon 416672..416674 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6492.t1.CDS1Ggra6492.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000074_pilon 416672..417238 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6492.t1.exon1Ggra6492.t1.exon1Gracilaria gracilis GNS1m maleexontig00000074_pilon 416672..417238 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6492.t1.start1Ggra6492.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000074_pilon 417236..417238 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6492.t1Ggra6492.t1Gracilaria gracilis GNS1m malepolypeptidetig00000074_pilon 416672..417238 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6492.t1 ID=Ggra6492.t1|Name=Ggra6492.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=189bp
MERQKRRSTRVPSAPVGGIPSSGSITKPILDNPEKLLRKTKPFGGQAEAD
DQSTARPRPSSSLPLQEVRGPPPDLLQRDDSPAGAHLNLDNMPRLVVDRA
YAELCHRVTKMEATRALEEQEFQVPKSVFRYLETDVKGHIDRLVILSLQD
HGMKVEAKTVAQAAAIPPNPSFPFKSPYSAPILNLPIN*
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spliced messenger RNA

>Ggra6492.t1 ID=Ggra6492.t1|Name=Ggra6492.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=567bp|location=Sequence derived from alignment at tig00000074_pilon:416672..417238- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCGGCAGAAGAGGCGATCCACAAGGGTGCCGAGTGCCCCAGTAGG
TGGAATACCCTCATCAGGATCCATAACGAAACCAATTTTGGACAACCCAG
AGAAACTATTACGCAAGACCAAACCGTTTGGTGGGCAAGCAGAAGCCGAC
GACCAATCGACCGCGAGGCCTAGGCCGAGCTCCTCCCTGCCATTGCAAGA
GGTACGCGGTCCACCACCCGATCTGTTACAGCGTGATGACTCCCCCGCGG
GCGCCCATTTGAACTTAGACAACATGCCCAGATTGGTGGTAGACAGAGCT
TACGCAGAGCTCTGCCATCGCGTGACCAAGATGGAGGCGACCAGGGCTCT
CGAAGAGCAGGAATTCCAAGTGCCGAAGTCGGTTTTTCGCTATTTGGAAA
CAGACGTAAAGGGGCATATAGACCGTTTGGTTATCTTGTCCCTGCAGGAT
CATGGAATGAAGGTGGAAGCGAAGACGGTTGCCCAAGCGGCCGCTATTCC
CCCTAACCCAAGTTTTCCTTTCAAATCGCCTTATAGTGCCCCCATTCTCA
ACCTTCCCATTAACTAG
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protein sequence of Ggra6492.t1

>Ggra6492.t1 ID=Ggra6492.t1|Name=Ggra6492.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=189bp
MERQKRRSTRVPSAPVGGIPSSGSITKPILDNPEKLLRKTKPFGGQAEAD
DQSTARPRPSSSLPLQEVRGPPPDLLQRDDSPAGAHLNLDNMPRLVVDRA
YAELCHRVTKMEATRALEEQEFQVPKSVFRYLETDVKGHIDRLVILSLQD
HGMKVEAKTVAQAAAIPPNPSFPFKSPYSAPILNLPIN*
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mRNA from alignment at tig00000074_pilon:416672..417238-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6492.t1 ID=Ggra6492.t1|Name=Ggra6492.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=567bp|location=Sequence derived from alignment at tig00000074_pilon:416672..417238- (Gracilaria gracilis GNS1m male)
ATGGAGCGGCAGAAGAGGCGATCCACAAGGGTGCCGAGTGCCCCAGTAGG
TGGAATACCCTCATCAGGATCCATAACGAAACCAATTTTGGACAACCCAG
AGAAACTATTACGCAAGACCAAACCGTTTGGTGGGCAAGCAGAAGCCGAC
GACCAATCGACCGCGAGGCCTAGGCCGAGCTCCTCCCTGCCATTGCAAGA
GGTACGCGGTCCACCACCCGATCTGTTACAGCGTGATGACTCCCCCGCGG
GCGCCCATTTGAACTTAGACAACATGCCCAGATTGGTGGTAGACAGAGCT
TACGCAGAGCTCTGCCATCGCGTGACCAAGATGGAGGCGACCAGGGCTCT
CGAAGAGCAGGAATTCCAAGTGCCGAAGTCGGTTTTTCGCTATTTGGAAA
CAGACGTAAAGGGGCATATAGACCGTTTGGTTATCTTGTCCCTGCAGGAT
CATGGAATGAAGGTGGAAGCGAAGACGGTTGCCCAAGCGGCCGCTATTCC
CCCTAACCCAAGTTTTCCTTTCAAATCGCCTTATAGTGCCCCCATTCTCA
ACCTTCCCATTAACTAG
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Coding sequence (CDS) from alignment at tig00000074_pilon:416672..417238-

>Ggra6492.t1 ID=Ggra6492.t1|Name=Ggra6492.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=567bp|location=Sequence derived from alignment at tig00000074_pilon:416672..417238- (Gracilaria gracilis GNS1m male)
ATGGAGCGGCAGAAGAGGCGATCCACAAGGGTGCCGAGTGCCCCAGTAGG
TGGAATACCCTCATCAGGATCCATAACGAAACCAATTTTGGACAACCCAG
AGAAACTATTACGCAAGACCAAACCGTTTGGTGGGCAAGCAGAAGCCGAC
GACCAATCGACCGCGAGGCCTAGGCCGAGCTCCTCCCTGCCATTGCAAGA
GGTACGCGGTCCACCACCCGATCTGTTACAGCGTGATGACTCCCCCGCGG
GCGCCCATTTGAACTTAGACAACATGCCCAGATTGGTGGTAGACAGAGCT
TACGCAGAGCTCTGCCATCGCGTGACCAAGATGGAGGCGACCAGGGCTCT
CGAAGAGCAGGAATTCCAAGTGCCGAAGTCGGTTTTTCGCTATTTGGAAA
CAGACGTAAAGGGGCATATAGACCGTTTGGTTATCTTGTCCCTGCAGGAT
CATGGAATGAAGGTGGAAGCGAAGACGGTTGCCCAAGCGGCCGCTATTCC
CCCTAACCCAAGTTTTCCTTTCAAATCGCCTTATAGTGCCCCCATTCTCA
ACCTTCCCATTAACTAG
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