Ggra6485.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6485.t1
Unique NameGgra6485.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length442
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:303473..304798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6485Ggra6485Gracilaria gracilis GNS1m malegenetig00000074_pilon 303473..304798 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6485.t1.stop1Ggra6485.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000074_pilon 303473..303475 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6485.t1.CDS1Ggra6485.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000074_pilon 303473..304798 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6485.t1.exon1Ggra6485.t1.exon1Gracilaria gracilis GNS1m maleexontig00000074_pilon 303473..304798 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6485.t1.start1Ggra6485.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000074_pilon 304796..304798 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6485.t1Ggra6485.t1Gracilaria gracilis GNS1m malepolypeptidetig00000074_pilon 303473..304798 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6485.t1 ID=Ggra6485.t1|Name=Ggra6485.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=442bp
MNNLDLLFQASLLVESEKLHEVDKFFVVSKDLKSCMGMRMSGWTILRDLL
CSAEGTIQCARERVHGKDDDSQLKRYVGDYSNLISIIVQLYSQEAELLHA
VKRQIVDVFAAKNEMIQRYGHSSWAEKNVEEVVADNSKPPVTTTTACGDK
QRQADAPQECGRTERAACEGRTHGCSEVNKGDNKGDNKGDNKKETTGSAK
AFTGENGRLKIRIPVNRQDTKVNVDVQKGGEAESKEELEEEVCMDDDDVG
EQKKSKQVEGATSVSEEEKMEACSAVLKEKEAEACKPNQRIGAQSAECTK
QVKKEVCGATTRSLRRNRKRRSVETEQDGVGGTKRRRINWTAQENKLFIE
LVDKFQAMGEAEMRRRVARHFSPRRTHEQCANHLRILRAKGVIASVEEQP
AASGGGGGGGGGGGGGGGGGNRCGHTSRDSSVTMSRDSEWC*
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spliced messenger RNA

>Ggra6485.t1 ID=Ggra6485.t1|Name=Ggra6485.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1326bp|location=Sequence derived from alignment at tig00000074_pilon:303473..304798- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACAACCTGGACCTGTTGTTTCAAGCATCATTGCTCGTGGAGTCAGA
GAAGCTCCATGAAGTGGACAAGTTCTTCGTGGTGAGCAAAGACCTGAAAT
CGTGCATGGGAATGCGAATGAGTGGGTGGACCATCCTTCGCGACCTACTG
TGTTCAGCCGAGGGTACCATCCAATGCGCCAGAGAAAGGGTGCACGGAAA
GGACGACGATTCGCAACTGAAGAGGTATGTGGGCGACTATTCCAACTTGA
TATCGATCATTGTGCAACTGTACAGCCAGGAGGCCGAGCTGCTTCATGCT
GTGAAGCGACAGATTGTTGACGTGTTCGCCGCGAAGAATGAGATGATTCA
GAGATATGGACACTCAAGTTGGGCTGAGAAAAATGTGGAGGAAGTTGTAG
CCGACAATAGCAAGCCGCCAGTTACGACAACGACTGCGTGTGGCGACAAG
CAGAGGCAAGCGGATGCGCCTCAAGAGTGTGGACGCACTGAGCGGGCTGC
ATGTGAGGGAAGGACTCATGGTTGCAGCGAAGTCAACAAGGGGGACAACA
AGGGGGACAACAAGGGGGACAACAAGAAGGAAACAACAGGATCGGCGAAA
GCATTTACGGGGGAAAACGGCAGGCTAAAGATTAGAATCCCTGTGAACAG
ACAGGATACAAAAGTTAATGTGGATGTTCAAAAGGGTGGTGAGGCGGAAA
GCAAAGAGGAGCTGGAGGAAGAAGTTTGCATGGATGATGACGATGTAGGT
GAGCAGAAGAAGAGCAAGCAAGTGGAAGGCGCCACAAGTGTTTCGGAAGA
GGAGAAGATGGAAGCTTGCAGCGCGGTTTTGAAAGAGAAGGAAGCGGAAG
CATGCAAGCCAAACCAGCGTATTGGTGCACAAAGTGCAGAGTGTACGAAG
CAAGTGAAGAAGGAAGTTTGTGGAGCGACAACTCGATCACTAAGGAGGAA
TCGCAAACGACGGTCAGTGGAAACAGAGCAGGATGGAGTTGGAGGAACGA
AGCGACGAAGGATTAACTGGACAGCGCAAGAGAATAAGCTGTTTATTGAA
CTTGTGGACAAATTCCAAGCGATGGGCGAAGCGGAGATGAGACGACGCGT
GGCACGTCATTTCTCGCCTCGTCGGACGCACGAGCAATGTGCCAACCATT
TGCGCATCCTGCGGGCCAAGGGCGTGATCGCAAGTGTGGAAGAGCAGCCG
GCAGCAAGCGGCGGCGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTGG
TGGTGGTGGTAATCGGTGCGGTCACACGAGCAGAGATTCCTCGGTGACAA
TGTCGAGAGATAGTGAATGGTGTTAG
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protein sequence of Ggra6485.t1

>Ggra6485.t1 ID=Ggra6485.t1|Name=Ggra6485.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=442bp
MNNLDLLFQASLLVESEKLHEVDKFFVVSKDLKSCMGMRMSGWTILRDLL
CSAEGTIQCARERVHGKDDDSQLKRYVGDYSNLISIIVQLYSQEAELLHA
VKRQIVDVFAAKNEMIQRYGHSSWAEKNVEEVVADNSKPPVTTTTACGDK
QRQADAPQECGRTERAACEGRTHGCSEVNKGDNKGDNKGDNKKETTGSAK
AFTGENGRLKIRIPVNRQDTKVNVDVQKGGEAESKEELEEEVCMDDDDVG
EQKKSKQVEGATSVSEEEKMEACSAVLKEKEAEACKPNQRIGAQSAECTK
QVKKEVCGATTRSLRRNRKRRSVETEQDGVGGTKRRRINWTAQENKLFIE
LVDKFQAMGEAEMRRRVARHFSPRRTHEQCANHLRILRAKGVIASVEEQP
AASGGGGGGGGGGGGGGGGGNRCGHTSRDSSVTMSRDSEWC*
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mRNA from alignment at tig00000074_pilon:303473..304798-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6485.t1 ID=Ggra6485.t1|Name=Ggra6485.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1326bp|location=Sequence derived from alignment at tig00000074_pilon:303473..304798- (Gracilaria gracilis GNS1m male)
ATGAACAACCTGGACCTGTTGTTTCAAGCATCATTGCTCGTGGAGTCAGA
GAAGCTCCATGAAGTGGACAAGTTCTTCGTGGTGAGCAAAGACCTGAAAT
CGTGCATGGGAATGCGAATGAGTGGGTGGACCATCCTTCGCGACCTACTG
TGTTCAGCCGAGGGTACCATCCAATGCGCCAGAGAAAGGGTGCACGGAAA
GGACGACGATTCGCAACTGAAGAGGTATGTGGGCGACTATTCCAACTTGA
TATCGATCATTGTGCAACTGTACAGCCAGGAGGCCGAGCTGCTTCATGCT
GTGAAGCGACAGATTGTTGACGTGTTCGCCGCGAAGAATGAGATGATTCA
GAGATATGGACACTCAAGTTGGGCTGAGAAAAATGTGGAGGAAGTTGTAG
CCGACAATAGCAAGCCGCCAGTTACGACAACGACTGCGTGTGGCGACAAG
CAGAGGCAAGCGGATGCGCCTCAAGAGTGTGGACGCACTGAGCGGGCTGC
ATGTGAGGGAAGGACTCATGGTTGCAGCGAAGTCAACAAGGGGGACAACA
AGGGGGACAACAAGGGGGACAACAAGAAGGAAACAACAGGATCGGCGAAA
GCATTTACGGGGGAAAACGGCAGGCTAAAGATTAGAATCCCTGTGAACAG
ACAGGATACAAAAGTTAATGTGGATGTTCAAAAGGGTGGTGAGGCGGAAA
GCAAAGAGGAGCTGGAGGAAGAAGTTTGCATGGATGATGACGATGTAGGT
GAGCAGAAGAAGAGCAAGCAAGTGGAAGGCGCCACAAGTGTTTCGGAAGA
GGAGAAGATGGAAGCTTGCAGCGCGGTTTTGAAAGAGAAGGAAGCGGAAG
CATGCAAGCCAAACCAGCGTATTGGTGCACAAAGTGCAGAGTGTACGAAG
CAAGTGAAGAAGGAAGTTTGTGGAGCGACAACTCGATCACTAAGGAGGAA
TCGCAAACGACGGTCAGTGGAAACAGAGCAGGATGGAGTTGGAGGAACGA
AGCGACGAAGGATTAACTGGACAGCGCAAGAGAATAAGCTGTTTATTGAA
CTTGTGGACAAATTCCAAGCGATGGGCGAAGCGGAGATGAGACGACGCGT
GGCACGTCATTTCTCGCCTCGTCGGACGCACGAGCAATGTGCCAACCATT
TGCGCATCCTGCGGGCCAAGGGCGTGATCGCAAGTGTGGAAGAGCAGCCG
GCAGCAAGCGGCGGCGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTGG
TGGTGGTGGTAATCGGTGCGGTCACACGAGCAGAGATTCCTCGGTGACAA
TGTCGAGAGATAGTGAATGGTGTTAG
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Coding sequence (CDS) from alignment at tig00000074_pilon:303473..304798-

>Ggra6485.t1 ID=Ggra6485.t1|Name=Ggra6485.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1326bp|location=Sequence derived from alignment at tig00000074_pilon:303473..304798- (Gracilaria gracilis GNS1m male)
ATGAACAACCTGGACCTGTTGTTTCAAGCATCATTGCTCGTGGAGTCAGA
GAAGCTCCATGAAGTGGACAAGTTCTTCGTGGTGAGCAAAGACCTGAAAT
CGTGCATGGGAATGCGAATGAGTGGGTGGACCATCCTTCGCGACCTACTG
TGTTCAGCCGAGGGTACCATCCAATGCGCCAGAGAAAGGGTGCACGGAAA
GGACGACGATTCGCAACTGAAGAGGTATGTGGGCGACTATTCCAACTTGA
TATCGATCATTGTGCAACTGTACAGCCAGGAGGCCGAGCTGCTTCATGCT
GTGAAGCGACAGATTGTTGACGTGTTCGCCGCGAAGAATGAGATGATTCA
GAGATATGGACACTCAAGTTGGGCTGAGAAAAATGTGGAGGAAGTTGTAG
CCGACAATAGCAAGCCGCCAGTTACGACAACGACTGCGTGTGGCGACAAG
CAGAGGCAAGCGGATGCGCCTCAAGAGTGTGGACGCACTGAGCGGGCTGC
ATGTGAGGGAAGGACTCATGGTTGCAGCGAAGTCAACAAGGGGGACAACA
AGGGGGACAACAAGGGGGACAACAAGAAGGAAACAACAGGATCGGCGAAA
GCATTTACGGGGGAAAACGGCAGGCTAAAGATTAGAATCCCTGTGAACAG
ACAGGATACAAAAGTTAATGTGGATGTTCAAAAGGGTGGTGAGGCGGAAA
GCAAAGAGGAGCTGGAGGAAGAAGTTTGCATGGATGATGACGATGTAGGT
GAGCAGAAGAAGAGCAAGCAAGTGGAAGGCGCCACAAGTGTTTCGGAAGA
GGAGAAGATGGAAGCTTGCAGCGCGGTTTTGAAAGAGAAGGAAGCGGAAG
CATGCAAGCCAAACCAGCGTATTGGTGCACAAAGTGCAGAGTGTACGAAG
CAAGTGAAGAAGGAAGTTTGTGGAGCGACAACTCGATCACTAAGGAGGAA
TCGCAAACGACGGTCAGTGGAAACAGAGCAGGATGGAGTTGGAGGAACGA
AGCGACGAAGGATTAACTGGACAGCGCAAGAGAATAAGCTGTTTATTGAA
CTTGTGGACAAATTCCAAGCGATGGGCGAAGCGGAGATGAGACGACGCGT
GGCACGTCATTTCTCGCCTCGTCGGACGCACGAGCAATGTGCCAACCATT
TGCGCATCCTGCGGGCCAAGGGCGTGATCGCAAGTGTGGAAGAGCAGCCG
GCAGCAAGCGGCGGCGGCGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTGG
TGGTGGTGGTAATCGGTGCGGTCACACGAGCAGAGATTCCTCGGTGACAA
TGTCGAGAGATAGTGAATGGTGTTAG
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