Ggra7916.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7916.t1
Unique NameGgra7916.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Homology
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A2V3J516 (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J516_9FLOR)

HSP 1 Score: 364 bits (935), Expect = 1.120e-125
Identity = 175/234 (74.79%), Postives = 205/234 (87.61%), Query Frame = 0
Query:    1 MPPESLQRSLAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSMWLK 234
            MPPES++ +L AI FDLDGTC+NSD IH++CYRDTL +L+P+FN G PITR++YDS+MSGRQNPELV++ILPQL L EQT +WQTKESRYE VIS GVSP+AGL +L++RCKQ GIITY+VTNAPK TC KT+ SI IT++FG+ VVV+EECE+PKPHPAPYLRA+ELA VSA E+IAFEDSPSGT SA  AGLLT+GMRSTQ+DE LRSFGAAFTV DYNDPKL SAL MW K
Sbjct:    9 MPPESIEGTLKAILFDLDGTCLNSDHIHYECYRDTLLELIPSFNGGKPITREFYDSEMSGRQNPELVSKILPQLPLHEQTRLWQTKESRYEDVISKGVSPIAGLIELIKRCKQDGIITYIVTNAPKGTCVKTVSSIGITEYFGSHVVVAEECEYPKPHPAPYLRALELAGVSAKEAIAFEDSPSGTRSAIGAGLLTIGMRSTQSDETLRSFGAAFTVRDYNDPKLLSALCMWTK 242          
BLAST of Ggra7916.t1 vs. uniprot
Match: R7QAB4 (HAD-like hydrolase family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAB4_CHOCR)

HSP 1 Score: 273 bits (697), Expect = 1.230e-89
Identity = 133/224 (59.38%), Postives = 166/224 (74.11%), Query Frame = 0
Query:   10 LAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSMWL 233
            L A+FFDLDGTCVNSD IHF  YRD L +L PTFN G PITR YYD+ MSGRQNPELVA +LP + L  +T +WQ KE+RYE  I+ GV P++GL  LL   + + + TYVVTNAP+ +C KTM +I I +HFG+ V+V+E+C  PKP PAPYL A++LA V   +++ FEDSPSGT SA AAGLLT+G+RSTQTDE LR+ GA  T+ DY D  L  AL+ W+
Sbjct:    8 LQALFFDLDGTCVNSDHIHFSTYRDILLELAPTFNSGLPITRTYYDTHMSGRQNPELVASLLPSVPLPIRTRLWQAKEARYEDHITRGVPPISGLPDLLSLARTKHLRTYVVTNAPRGSCHKTMAAIGIAEHFGSHVIVAEDCAAPKPDPAPYLTALKLAGVRPDQAVVFEDSPSGTCSAVAAGLLTIGVRSTQTDETLRAAGATLTIGDYRDAVLHKALAKWV 231          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A1X6NWD3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWD3_PORUM)

HSP 1 Score: 178 bits (451), Expect = 1.020e-51
Identity = 101/233 (43.35%), Postives = 138/233 (59.23%), Query Frame = 0
Query:    2 PPESLQR-SLAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSMWL 233
            PP S Q  +L+A+ FD+DGT V  D  HF+ Y DTL ++ P FN G  ITR++Y+++MSGRQNP L+ +I+P +S +    I  TKE  Y +  +  +  +AG   LL      G+   VVTNAP+     T+   A+ D F   V+V +EC   KP P PY+       V   E+IAFEDSPSG TSA AAGLLT+G+ +      L + GAAF + DY D +LA+ L +WL
Sbjct:   39 PPISTQGGTLSAVLFDMDGTLVAGDDHHFEAYADTLLEMEPQFNGGKRITREFYNTRMSGRQNPVLLKEIMPDVSPERGVVIADTKERAYMRRTAGAIEALAGAAALLDVLAAAGVRLGVVTNAPREIMEHTLGEAALRDRFP-VVIVGDECARAKPFPDPYVDGCRALDVQPREAIAFEDSPSGITSAVAAGLLTIGVGTGHPPATLLAAGAAFVIHDYYDERLATVLGLWL 270          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A6H5JCU9 (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU9_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 6.890e-50
Identity = 87/227 (38.33%), Postives = 135/227 (59.47%), Query Frame = 0
Query:    5 SLQRSLAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSM 231
            SL  ++  I FD+DGT  +SD++HF+ YR+T  ++ P+FN G  I+R+YYD  MSG  NP +V ++ P++  ++QT +W+ KE  Y + IS  ++P+ GL K L  C+ +G+   +VTNAP+     T+  + ++D F   +V+  EC   KPHP PYL  +    + A   +AFEDS +G +SA +AGL T G+     +      G    VSDY D +L +AL +
Sbjct:   94 SLPATVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRK-ISTTMTPLPGLLKFLDCCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECARAKPHPDPYLEGLSRLGLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLYAALGV 319          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A835ZE39 (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE39_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.760e-49
Identity = 91/233 (39.06%), Postives = 135/233 (57.94%), Query Frame = 0
Query:    2 PPESLQRSLAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQG-----IITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASAL 229
            P +     +    FD+DGT V+SD +HF+ YRD + ++ P  N G PI + +Y   MSG  N  + A++ P + L +Q  +W  KE+ Y + IS  ++P+ GL +LL+ C  +      I T +VTNAP+     TM+ + I + FGN VV+  EC   KPHP PYL  +    ++A + IAFEDS +G  SATAAGL TVG+ +   + ALR  GA   ++D+ D +L + L
Sbjct:   57 PAQPSPAHIKGCLFDMDGTLVDSDELHFEAYRDIILEMRPDHNGGKPIDKAWYKEWMSGNSNAVITARLFPDMPLAQQEEMWDRKEALYRR-ISTAMAPLPGLARLLEWCDLEDDDKARIATIIVTNAPRLDARHTMEVLGIHERFGNTVVIGAECARAKPHPEPYLEGLRRLGLAARDCIAFEDSLNGCRSATAAGLFTVGVTTGLDEAALRGAGAGVCIADFTDERLWALL 288          
BLAST of Ggra7916.t1 vs. uniprot
Match: D8LK30 (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK30_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 9.450e-46
Identity = 81/215 (37.67%), Postives = 127/215 (59.07%), Query Frame = 0
Query:   17 LDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSM 231
            +DGT  +SD++HF+ YR+T  +L P+FN G  I+R+YYD  MSG  NP +V ++ P++  ++QT +W+ KE  Y + IS  ++ + GL + L  C+ +G+   +VTNAP+     T+  + ++D F   +V+  EC   KPHP PYL  +    + A   +AFEDS +G +SA +AGL T G+     +      G    VSDY D +L +AL +
Sbjct:    1 MDGTLTDSDTLHFEAYRETFLKLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRK-ISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLHAALGV 214          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A6U0VYW9 (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYW9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 8.420e-44
Identity = 87/221 (39.37%), Postives = 128/221 (57.92%), Query Frame = 0
Query:   10 LAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEAL-RSFGAAFTVSDYNDPKLASAL 229
            L  I FD+DGT  +SDS+HF+ Y+ TL +L P   +   ITR++YD +MSG+ N  +V ++LP LS ++Q  +W  KE  Y ++ S  +    GL   LQ C    + T VVTNAP+     T+  + +   F   VV+  EC+  KP P PYL  +    +SAS+ IAFEDSPSG  SA AA L TV + S++++E +  + G    V  ++D +L  +L
Sbjct:  160 LRGILFDMDGTLTDSDSVHFEAYKATLARLAPELPE---ITREFYDKEMSGQSNEIIVPKVLPDLSPEQQRQVWVQKEEEYRRLTSDSMQRFEGLDAFLQWCDSNSLKTIVVTNAPREDAMHTLTMLGLFGRFAKHVVIGMECKEAKPSPEPYLEGLRKLGLSASQCIAFEDSPSGAKSAIAAQLRTVAVLSSRSEEEMVATHGCVMGVRRFDDARLLESL 377          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0YSY1 (HAD-superfamily hydrolase subfamily IA, variant 3 n=2 Tax=Lyngbya TaxID=28073 RepID=A0YSY1_LYNSP)

HSP 1 Score: 155 bits (391), Expect = 2.140e-43
Identity = 93/225 (41.33%), Postives = 137/225 (60.89%), Query Frame = 0
Query:   10 LAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSMWLK 234
            L AI FDLDGT  N+D +HF  +++TLQ    T+N    I   +Y + +SGRQNPE++  ++PQLSLKE   +   KE+R+ + I+  + P+AGL ++L   +  G+   VVTNAP+      ++ + +T+ F   VV+ E+    KP PAPY  ++E   +  SE+I FEDSPSG  SA AAG+ T+G+ ST     L++ GA+  V+D+ND      LSMW K
Sbjct:    2 LKAILFDLDGTLANTDPLHFKIWQETLQ----TYN--QEIDHPFYKTYISGRQNPEIIKDLIPQLSLKEGEELADHKEARFRE-IARELQPLAGLLEMLTWIETVGLNKAVVTNAPRENAHFMLEVLQLTERF-EFVVLGEDMIAGKPDPAPYQYSLEQLKIQPSEAIVFEDSPSGIRSAVAAGIDTIGVASTHEPSVLKAIGASQVVNDFND------LSMWAK 212          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A6P0TH84 (HAD-IA family hydrolase n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TH84_9CYAN)

HSP 1 Score: 151 bits (382), Expect = 5.680e-42
Identity = 86/228 (37.72%), Postives = 132/228 (57.89%), Query Frame = 0
Query:    2 PPESLQRSLAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASAL 229
            PPE       AI FDLDGT  N+D++HF  +R+ L       N    I R++YD + SGR N +++ +ILPQLS++    +   KE+ +    S  + P+ GL   L   +   +   VVTNAP+      +Q++ + DH  + V++ EE E  KPHP PYL A+E   V+A+++I FEDSP+G T+   AG+ TVG+ STQ  ++L++ GA   + D+ DP + + L
Sbjct:   19 PPE-------AILFDLDGTLTNTDALHFQIWREFL------LNYDLDIDREFYDQKFSGRLNQDILVEILPQLSMEAAIALGVEKEAEFRNRASGSLVPLPGLLSTLDWIESHNLKKAVVTNAPRQNALFMLQTLKV-DHRFSLVIIGEEVEFAKPHPLPYLTALEKLGVAAAKAIVFEDSPTGITAGVKAGIFTVGVASTQEPDSLKALGANVVIEDFTDPIVMALL 232          
BLAST of Ggra7916.t1 vs. uniprot
Match: A0A0F5YGW1 (Hydrolase n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YGW1_9CYAN)

HSP 1 Score: 150 bits (380), Expect = 9.300e-42
Identity = 86/225 (38.22%), Postives = 135/225 (60.00%), Query Frame = 0
Query:   10 LAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPITRQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSPVAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSEECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMRSTQTDEALRSFGAAFTVSDYNDPKLASALSMWLK 234
            L AI FDLDGT VN+D +HF  +++ LQ    T+N    I   +Y + +SGRQNP+++  ++PQLS+ E   + + KE+R+ ++    + P+AGL ++L   + +G+   VVTNAP+      ++ + +T+ F   VV+ EE    KP PAPY  A+E + +  SE+I FEDSPSG  SA  A + T+G+ ST     L++ GA+  ++D+ND      L +W K
Sbjct:    2 LKAILFDLDGTLVNTDPLHFKVWQEILQ----TYN--TEIDHSFYKTYISGRQNPQIIQDLIPQLSVSEGAELAEYKEARFREIALE-LQPIAGLMEMLTWIETEGLRKAVVTNAPRENARFMLEVLQLTERF-EFVVLGEEMIAGKPDPAPYQYALEQSQIQPSEAIVFEDSPSGIRSAVGAEIYTIGVASTHEPAVLKAIGASLVINDFND------LQLWAK 212          
The following BLAST results are available for this feature:
BLAST of Ggra7916.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5161.120e-12574.79Haloacid dehalogenase-like hydrolase domain-contai... [more]
R7QAB41.230e-8959.38HAD-like hydrolase family protein n=1 Tax=Chondrus... [more]
A0A1X6NWD31.020e-5143.35Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A6H5JCU96.890e-5038.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZE393.760e-4939.06HAD-like domain-containing protein n=1 Tax=Tribone... [more]
D8LK309.450e-4637.67Haloacid dehalogenase-like hydrolase family protei... [more]
A0A6U0VYW98.420e-4439.37Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0YSY12.140e-4341.33HAD-superfamily hydrolase subfamily IA, variant 3 ... [more]
A0A6P0TH845.680e-4237.72HAD-IA family hydrolase n=1 Tax=Cyanothece sp. SIO... [more]
A0A0F5YGW19.300e-4238.22Hydrolase n=1 Tax=Limnoraphis robusta CS-951 TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 12..214
e-value: 5.4E-41
score: 142.7
IPR023198Phosphoglycolate phosphatase-like, domain 2GENE3D1.10.150.240Putative phosphatase; domain 2coord: 25..97
e-value: 5.4E-41
score: 142.7
IPR041492Haloacid dehalogenase-like hydrolasePFAMPF13419HAD_2coord: 13..197
e-value: 1.3E-26
score: 93.8
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01509TIGR01509coord: 72..199
e-value: 2.4E-13
score: 48.5
NoneNo IPR availablePIRSRPIRSR004682-4PIRSR004682-4coord: 10..26
e-value: 77.0
score: 0.5
NoneNo IPR availableSFLDSFLDS00003Haloacid_Dehalogenasecoord: 11..220
e-value: 1.4E-27
score: 91.5
NoneNo IPR availableSFLDSFLDG01129C1.5:_HAD,_Beta-PGM,_Phosphatcoord: 11..220
e-value: 1.4E-27
score: 91.5
NoneNo IPR availablePANTHERPTHR461936-PHOSPHOGLUCONATE PHOSPHATASEcoord: 9..229
NoneNo IPR availablePANTHERPTHR46193:SF18HEXITOL PHOSPHATASE Bcoord: 9..229
NoneNo IPR availableCDDcd07505HAD_BPGM-likecoord: 12..201
e-value: 6.44587E-30
score: 106.931
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 12..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:430281..431074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7916.t1Ggra7916.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 430281..431074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7916.t1 ID=Ggra7916.t1|Name=Ggra7916.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MPPESLQRSLAAIFFDLDGTCVNSDSIHFDCYRDTLQQLVPTFNDGNPIT
RQYYDSQMSGRQNPELVAQILPQLSLKEQTHIWQTKESRYEQVISHGVSP
VAGLKKLLQRCKQQGIITYVVTNAPKSTCAKTMQSIAITDHFGNQVVVSE
ECEHPKPHPAPYLRAMELAAVSASESIAFEDSPSGTTSATAAGLLTVGMR
STQTDEALRSFGAAFTVSDYNDPKLASALSMWLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR023198PGP-like_dom2
IPR041492HAD_2
IPR006439HAD-SF_hydro_IA
IPR036412HAD-like_sf