Ggra7936.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7936.t1
Unique NameGgra7936.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length324
Homology
BLAST of Ggra7936.t1 vs. uniprot
Match: A0A2V3II70 (Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II70_9FLOR)

HSP 1 Score: 452 bits (1163), Expect = 1.250e-157
Identity = 217/312 (69.55%), Postives = 261/312 (83.65%), Query Frame = 0
Query:    8 VWQPGVPCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGASFVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDWECEEEEEDGKPRKAAKVKPVKTKDIKSFFSPKPKSSAALPSKRRKLAGVSCPMPQVLQSMALRRA 319
            +W P  PCVLGIDEAGRGPVLGPMVYAAAVCP S  + LRALGVNDSK+ +E+ RD+LRSKI+GA+F+R FE+ LTA +LS  MLRKEKYNLNL+SHDAA+GLVQ A++ GINV EIYVDTVGN + YAAKFRERF +V+KVVVAKKAD+TYPIVGAASI+AKTTRD  IREWCFPE++RS +F P DAN  V F+GP GSGYPSDP+TKTW+++NCD LFGFPTFVRFSWGT K IL +NAV+V+WEC++EE D    K AK K VKTKDIKSFF P  ++++++ +K+RK    +CP+PQ LQS+ LRRA
Sbjct:    9 MWYPNTPCVLGIDEAGRGPVLGPMVYAAAVCPISRLTDLRALGVNDSKALREEHRDELRSKIQGAAFLRTFETILTASFLSESMLRKEKYNLNLVSHDAAIGLVQKAMDHGINVAEIYVDTVGNPEQYAAKFRERFSAVEKVVVAKKADATYPIVGAASIVAKTTRDRRIREWCFPEQRRSADFRPGDANIAVQFVGPTGSGYPSDPMTKTWIEHNCDVLFGFPTFVRFSWGTAKVILDKNAVRVEWECDDEENDISTTKVAKKKSVKTKDIKSFF-PTKRTASSIGAKKRKSLKHACPLPQALQSLTLRRA 319          
BLAST of Ggra7936.t1 vs. uniprot
Match: A0A2V3IEU4 (Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU4_9FLOR)

HSP 1 Score: 362 bits (930), Expect = 3.030e-123
Identity = 170/247 (68.83%), Postives = 205/247 (83.00%), Query Frame = 0
Query:    8 VWQPGVPCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGASFVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDW 254
            +W P  PCVLGIDEAGR PVLGPMVYAAAVCP S  + LRALG N+SK+ +E+ RD+LR KI+GA+F+R FE+ LT  +LS +MLRKEKYNLNL+SHDAA+GLVQ A++ GINV EIY+DTVGN  HYAAKFR+RF +V+KVVVAKKAD+TYPIVGAASI+AKTTRD  IREW FPE++RS +F P DAN  V+F+G   S Y SDP+TKT ++ NCD LFGFPTFVRFSWGT K IL++NAV+ +W
Sbjct:    9 MWYPNTPCVLGIDEAGRRPVLGPMVYAAAVCPMSRLTDLRALGANNSKALREEHRDELRRKIQGAAFLRTFETILTGSFLSENMLRKEKYNLNLVSHDAAIGLVQKAMDHGINVAEIYIDTVGNLQHYAAKFRKRFSAVEKVVVAKKADATYPIVGAASIVAKTTRDRRIREWGFPEQRRSADFRPGDANIAVEFVGSTESSYLSDPITKTCIEQNCDVLFGFPTFVRFSWGTAKVILEKNAVRFEW 255          
BLAST of Ggra7936.t1 vs. uniprot
Match: A0A2V3IRJ3 (Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRJ3_9FLOR)

HSP 1 Score: 322 bits (824), Expect = 2.120e-107
Identity = 154/230 (66.96%), Postives = 182/230 (79.13%), Query Frame = 0
Query:    8 VWQPGVPCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGASFVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFS 237
            +W P  PCVLGIDE  RGPVLGPM YAAAVCP S  + LRAL V DSK+ +E  RD+LRSKI+  +F R FE+ LTA +LS  MLRKEKYNLNL+SHDAA+GL Q A++ GINV EIYVDTVGN + YAA FRERF +V+KVVV KK D+TYP+VGAASI+AKTTRD  IREWCFPE+++S EF P DAN  V+F+GP+ S Y SDP+ KT + +NCD LFGFPTF RFS
Sbjct:    9 MWYPNTPCVLGIDEGRRGPVLGPMAYAAAVCPISRLTDLRALWVKDSKALREKHRDELRSKIQKTAFSRTFETILTASFLSKSMLRKEKYNLNLVSHDAAIGLAQKAVDHGINVAEIYVDTVGNPEQYAAIFRERFSAVEKVVVTKKLDATYPMVGAASIVAKTTRDRGIREWCFPEQRQSAEFRPGDANIAVEFVGPKESAYSSDPIIKTCIGHNCDVLFGFPTFFRFS 238          
BLAST of Ggra7936.t1 vs. uniprot
Match: ribonuclease H2 subunit A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2CDD (ribonuclease H2 subunit A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2CDD)

HSP 1 Score: 282 bits (721), Expect = 1.470e-91
Identity = 143/242 (59.09%), Postives = 171/242 (70.66%), Query Frame = 0
Query:   13 VPCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGASFVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDW 254
            +PC LGIDEAGRGP LGPMVY+AA C  +    L ALG +DSK   EDQRD LR KI+ A F+      L A+ LS+ MLR  KYNLN ISHD AL LV+ AI+ G++V E+YVDTVGNAD YA KFR+ FP +DKV+VAKKAD+TY IVGAASI+AKTTRD+ +R W FPEE       P        F    GSGYPSDP TKTW+ ++ D +FGFPTFVRFSW T + IL+++AV V W
Sbjct:   12 LPCQLGIDEAGRGPCLGPMVYSAAYCALTDIPRLNALGADDSKQLTEDQRDALRVKIDDAQFLGSESIVLHAQELSAKMLRPNKYNLNAISHDTALELVRRAIDRGVDVREVYVDTVGNADSYADKFRDAFPQLDKVIVAKKADATYRIVGAASIVAKTTRDAVVRGWVFPEEVADCAVSPV-------FAKDYGSGYPSDPRTKTWLKDHVDPIFGFPTFVRFSWSTARIILKRDAVSVSW 246          
BLAST of Ggra7936.t1 vs. uniprot
Match: ribonuclease H2 subunit A-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939C7F0 (ribonuclease H2 subunit A-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939C7F0)

HSP 1 Score: 248 bits (632), Expect = 1.920e-77
Identity = 136/275 (49.45%), Postives = 169/275 (61.45%), Query Frame = 0
Query:   12 GVPCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGAS--FVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDWECEEEEEDGKPRKAAKVKPVKTKDIKSFFS 284
            G PC LGIDEAGRGPVLGPMVYA   CP S    L  LG +DSK+ KE+QRD+L  K++  +  FV    + L+  Y+S+ ML + KYNLN ISHD A+ L+++  N GI + E+YVDTVG+   Y AK +ERFPS+D + V  KAD+TYPIV AASI AK  RD  ++ W F ++ +  E                GSGYPSDP TK W+  + D +FGFP FVRFSW T K IL+  AV V+W  EEEEE  K           T  I SFFS
Sbjct:   26 GEPCFLGIDEAGRGPVLGPMVYATCFCPLSCKEKLANLGCDDSKALKEEQRDELFQKLDNCTDDFVGWIINILSPNYISTSMLSRTKYNLNSISHDTAIDLIKSVQNLGIELKEVYVDTVGSPVTYTAKLKERFPSID-ITVESKADATYPIVSAASICAKVCRDKTVKNWKFSDKIQVAE--------------NYGSGYPSDPSTKAWLRQSVDPVFGFPDFVRFSWSTAKNILEDEAVAVEWPDEEEEEGDKKSN--------TPAITSFFS 277          
BLAST of Ggra7936.t1 vs. uniprot
Match: G3MHV7 (Ribonuclease (Fragment) n=3 Tax=Amblyomma TaxID=6942 RepID=G3MHV7_AMBMU)

HSP 1 Score: 243 bits (620), Expect = 4.090e-75
Identity = 133/284 (46.83%), Postives = 173/284 (60.92%), Query Frame = 0
Query:   14 PCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIE-GASFVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDWECEEEEEDGKPRKAAKVKPVKTKDIKSFFSPKPKSSAALPSK 296
            PC+LG+DEAGRGPVLGPMVY    CP S    L+ LG  DSK+  E++R++L S IE  +SF+      ++   +S  ML   KYNLN ISHD+A+GL++ A  EG+NV E+YVDTVG  + Y  K  + FP + KV VAKKAD+TYPIV AASI AK  RD  IR W FPE    ++ +P+D           GSGYP+DP+TK ++  N D +FGFP  VRFSW T + +L+ +A  + W+ E+EE  GK    A         I+SFF   PK    L  K
Sbjct:   62 PCILGVDEAGRGPVLGPMVYGIVYCPISSKDQLKELGFADSKTLTEEKREELLSVIERNSSFLGFMVELISPVVISERMLHVSKYNLNSISHDSAIGLIRRAQEEGVNVAEVYVDTVGPPEKYQKKLEDCFPGI-KVTVAKKADATYPIVSAASICAKVARDRAIRSWQFPE---GIDVKPEDY----------GSGYPNDPVTKKFLAENTDLVFGFPGIVRFSWSTAEKLLEDHAAPIVWDEEDEEGAGKQNGMA--------SIQSFFQHDPKRGKKLTEK 323          
BLAST of Ggra7936.t1 vs. uniprot
Match: A0A8B7YTB4 (Ribonuclease n=2 Tax=Valvatida TaxID=41166 RepID=A0A8B7YTB4_ACAPL)

HSP 1 Score: 240 bits (613), Expect = 1.400e-74
Identity = 133/274 (48.54%), Postives = 169/274 (61.68%), Query Frame = 0
Query:   14 PCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGASFVRVFE-SALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDWECEEEEEDGKPRKAAKVKPVKTKDIKSFFSPK 286
            PC LGIDEAGRGPVLGPMVY  + CP S    L  LG  DSK+  E+QRD L SKI+ A+    FE   L+  Y+S+ MLR+ KY+LN IS D+A+GL++ AI++G N+ E+YVDTVG+A  Y  K +  FP +D + V  KAD+ +PIV AASI AK  RD  ++ W F         E DD        G  GSGYPSDP TK W+ +N D +FG+P FVRFSW TT T+L+  A  V WE E+E+E  K           T  + SFF+PK
Sbjct:   28 PCCLGIDEAGRGPVLGPMVYGVSFCPLSCKERLEQLGFADSKTLSEEQRDDLFSKIKEANDFLGFEVEILSPNYISTTMLRRTKYSLNAISMDSAIGLLRLAISQGANIKEVYVDTVGDAGKYQEKLQGLFPDLD-ITVTPKADAKFPIVSAASICAKVVRDQVLKTWAF--------LEGDDI-----VTGDYGSGYPSDPATKQWLADNLDKVFGYPQFVRFSWSTTSTLLENGAYLVHWEDEDEDESSKG----------TASLFSFFAPK 277          
BLAST of Ggra7936.t1 vs. uniprot
Match: A0A0G4INT2 (Ribonuclease n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4INT2_PLABS)

HSP 1 Score: 239 bits (611), Expect = 2.260e-74
Identity = 125/238 (52.52%), Postives = 154/238 (64.71%), Query Frame = 0
Query:   17 LGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGASFVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDW 254
            +GIDEAGRGPVLGP+VY AA CP    + L  LGV DSK+   D R++L + I+  +F+R    A+ +  +S+ MLR+ KYNLNLISHD+A+GLV+  +  G+ V EIYVDTVG+ D Y  K    FP   K VV KKADS +PIV AASI AKT RD  + EW F EE          A   + F    GSGYPSDP TK W+ ++CD +FGFP  VRFSW TTKTIL+Q  V V W
Sbjct:   16 VGIDEAGRGPVLGPLVYGAAYCPVDRQAQLADLGVADSKTLTADDRERLLAAIDACAFLRYELDAIPSATISALMLRRRKYNLNLISHDSAVGLVRRIMASGVAVAEIYVDTVGDPDKYERKLSALFPQA-KCVVRKKADSLFPIVSAASICAKTARDRLLSEWSFKEE---------GAGDALPFSRAFGSGYPSDPATKQWLVDHCDRVFGFPDLVRFSWQTTKTILEQRCVSVAW 243          
BLAST of Ggra7936.t1 vs. uniprot
Match: A0A8J4Z438 (Ribonuclease H2 subunit A n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4Z438_9CHEL)

HSP 1 Score: 239 bits (610), Expect = 4.230e-74
Identity = 130/278 (46.76%), Postives = 176/278 (63.31%), Query Frame = 0
Query:   15 CVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGAS-FVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDWECEEEEEDGKPRKAAKVKPVKTKDIKSFFSPKPKSSA 291
            C+LGIDEAGRGPVLGPMVY  A CP S    L+ +G  DSK+  E+ R+KL S +   S F+      L+  Y+S+ ML++ KYNLN +SHD+A+GLVQ A+++G+N++E++VDTVG+   Y AK    FP+++   VAKKAD+TYPIV AASI AK  RD  ++ W F E +   E         V F    GSGYP+DP TK++M +N D +FG+P FVRFSW T++TILQ+ A+ V W  EE++E+             T  I SFF    K S+
Sbjct:   29 CLLGIDEAGRGPVLGPMVYGIAFCPVSFAEKLKEMGFADSKTLSEEMREKLFSNLNSESKFIGWKAEILSPNYISNSMLKRGKYNLNALSHDSAIGLVQKALDDGVNLSEVFVDTVGDPKKYEAKLSSIFPNIN-FTVAKKADATYPIVSAASICAKVARDRVVKGWKFMEGESFNE---------VKF----GSGYPADPTTKSFMADNVDKVFGYPQFVRFSWSTSETILQKQAISVTWSDEEDDEN-------------TPSILSFFGKNSKRSS 279          
BLAST of Ggra7936.t1 vs. uniprot
Match: F7B1W3 (Ribonuclease n=3 Tax=Ciona intestinalis TaxID=7719 RepID=F7B1W3_CIOIN)

HSP 1 Score: 238 bits (607), Expect = 8.780e-74
Identity = 126/253 (49.80%), Postives = 160/253 (63.24%), Query Frame = 0
Query:   14 PCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALGVNDSKSFKEDQRDKLRSKIEGAS-FVRVFESALTAEYLSSHMLRKEKYNLNLISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVVVAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRVDFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAVQVDWECEEEEEDGKP 265
            PC LGIDEAGRGPVLGPMVYA+   P S    L  LG +DSK  KE+QR+ L   +  AS ++      L+  Y+S+ ML + KYNLN ISHD A+ L+++A+  G+ VTE+YVDTVG    YA K ++ FPS+ K  V KKADS YP+V AASI AK  RD  ++EW F E        PD   K        GSGYP+DP+TK W+ NN D +FGFP+FVRFSW TT  +L+  AV V W  ++EE   +P
Sbjct:   28 PCCLGIDEAGRGPVLGPMVYASCFTPISCKDKLAGLGCDDSKVLKEEQRESLFETLNKASEYIGWMIHILSPAYISTSMLGRSKYNLNSISHDTAIDLIRSALKLGVEVTEVYVDTVGPPQTYAEKLKKIFPSI-KFTVEKKADSKYPVVSAASICAKVCRDKAVKEWRFREN-------PDTDTKY-------GSGYPADPVTKVWLRNNVDRIFGFPSFVRFSWSTTSKLLENEAVPVHWADDDEESSNEP 265          
The following BLAST results are available for this feature:
BLAST of Ggra7936.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II701.250e-15769.55Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A2V3IEU43.030e-12368.83Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A2V3IRJ32.120e-10766.96Ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
ribonuclease H2 subunit A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2CDD1.470e-9159.09ribonuclease H2 subunit A-like n=1 Tax=Mercenaria ... [more]
ribonuclease H2 subunit A-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939C7F01.920e-7749.45ribonuclease H2 subunit A-like n=1 Tax=Styela clav... [more]
G3MHV74.090e-7546.83Ribonuclease (Fragment) n=3 Tax=Amblyomma TaxID=69... [more]
A0A8B7YTB41.400e-7448.54Ribonuclease n=2 Tax=Valvatida TaxID=41166 RepID=A... [more]
A0A0G4INT22.260e-7452.52Ribonuclease n=1 Tax=Plasmodiophora brassicae TaxI... [more]
A0A8J4Z4384.230e-7446.76Ribonuclease H2 subunit A n=1 Tax=Nymphon striatum... [more]
F7B1W38.780e-7449.80Ribonuclease n=3 Tax=Ciona intestinalis TaxID=7719... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 323..323
NoneNo IPR availablePANTHERPTHR10954:SF7RIBONUCLEASE H2 SUBUNIT Acoord: 10..292
NoneNo IPR availableCDDcd07181RNase_HII_eukaryota_likecoord: 17..250
e-value: 7.38986E-122
score: 347.199
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..188
e-value: 2.6E-58
score: 198.9
IPR024567Ribonuclease HII/HIII domainPFAMPF01351RNase_HIIcoord: 17..240
e-value: 7.3E-48
score: 163.0
IPR023160Ribonuclease HII, helix-loop-helix cap domain superfamilyGENE3D1.10.10.460Ribonuclease hii. Domain 2coord: 205..250
e-value: 1.8E-19
score: 71.1
IPR004649Ribonuclease H2, subunit ATIGRFAMTIGR00729TIGR00729coord: 16..246
e-value: 7.4E-48
score: 161.3
IPR001352Ribonuclease HII/HIIIPANTHERPTHR10954RIBONUCLEASE H2 SUBUNIT Acoord: 10..292
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 15..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:469645..470711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7936.t1Ggra7936.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 469645..470711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7936.t1 ID=Ggra7936.t1|Name=Ggra7936.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=324bp
MCEEKREVWQPGVPCVLGIDEAGRGPVLGPMVYAAAVCPKSHTSSLRALG
VNDSKSFKEDQRDKLRSKIEGASFVRVFESALTAEYLSSHMLRKEKYNLN
LISHDAALGLVQNAINEGINVTEIYVDTVGNADHYAAKFRERFPSVDKVV
VAKKADSTYPIVGAASIMAKTTRDSHIREWCFPEEQRSVEFEPDDANKRV
DFIGPRGSGYPSDPLTKTWMDNNCDNLFGFPTFVRFSWGTTKTILQQNAV
QVDWECEEEEEDGKPRKAAKVKPVKTKDIKSFFSPKPKSSAALPSKRRKL
AGVSCPMPQVLQSMALRRAPGLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR024567RNase_HII/HIII_dom
IPR023160RNase_HII_hlx-loop-hlx_cap_dom
IPR004649RNase_H2_suA
IPR001352RNase_HII/HIII
IPR012337RNaseH-like_sf