Ggra7903.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7903.t1
Unique Name	Ggra7903.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	173

Homology

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BLAST of Ggra7903.t1 vs. uniprot
Match: A0A2V3J5C4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C4_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 5.480e-43
Identity = 103/170 (60.59%), Postives = 120/170 (70.59%), Query Frame = 0

Query:   12 LLPSRNRATSDA-LAMLHAASEAVSQQ---------------QLTTPPVLPPVRLQSPPPTQPSRPSHDLSALLNPMPPSEVMRPPPGFVVGKDGKLRKKRGRKPKPGLSDEQRRQARLLKNRRTAETSRRRKIALMKKLAVERDDAQQLVLNMASLINLLQRRLASEMN 165
            +LP+   A++ + LA+L AAS AVS Q               Q   P VLPP  LQ+ PPT   R   DLSALLNPMPP+  + PPPGFV GKDGKL+KKRGRKP PGLSDEQRRQARLLKNRRTAETSRRRKIALMK+L+ ERD+A+   L MA LI+ L +RLA +MN
Sbjct:   12 VLPAAGVASATSGLALLQAASAAVSHQLTPLRAPFMSSNAHSQNVQPSVLPP--LQTLPPT---RIPPDLSALLNPMPPAAQITPPPGFVFGKDGKLKKKRGRKPTPGLSDEQRRQARLLKNRRTAETSRRRKIALMKRLSAERDEARDAALKMAHLISRLHQRLAQQMN 176

[Close]

BLAST of Ggra7903.t1 vs. uniprot
Match: A0A7S0G2J9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G2J9_9RHOD)

HSP 1 Score: 56.2 bits (134), Expect = 5.340e-7
Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 0

Query:   93 RKKRGRKPKPGLSDEQRRQARLLKNRRTAETSRRRKIALMKKLAVERDDAQQLVLNMASLINLLQRRLASEMNRYT 168
            RKKRGR+P PG++ E+RR  RL+KNRRTAE SR+RK+   K L  E +  ++ V  + + ++LLQ R+ +  +R T
Sbjct:   44 RKKRGRRPTPGMTPEERRTHRLMKNRRTAELSRQRKLEQTKSLQGENESLKKEVGELKAKLSLLQSRMQAYADRAT 119

The following BLAST results are available for this feature:

BLAST of Ggra7903.t1 vs. uniprot

BLAST of Ggra7903.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J5C4	5.480e-43	60.59	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A7S0G2J9	5.340e-7	46.05	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:399164..399786 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7903.t1	Ggra7903.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 399164..399786 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7903.t1 ID=Ggra7903.t1|Name=Ggra7903.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=173bp
MTELNVKLCVPLLPSRNRATSDALAMLHAASEAVSQQQLTTPPVLPPVRL
QSPPPTQPSRPSHDLSALLNPMPPSEVMRPPPGFVVGKDGKLRKKRGRKP
KPGLSDEQRRQARLLKNRRTAETSRRRKIALMKKLAVERDDAQQLVLNMA
SLINLLQRRLASEMNRYTLRYA*