Ggra7930.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7930.t1
Unique Name	Ggra7930.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	1097

Homology

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BLAST of Ggra7930.t1 vs. uniprot
Match: A0A2V3IW43 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW43_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 1.030e-74
Identity = 179/404 (44.31%), Postives = 227/404 (56.19%), Query Frame = 0

Query:    1 MQRHPSGCDPQAFRGRHSLNIP---RQNARKRTSYDPVLESLPGMQTALGELERSGPSLYRGTIERSNLNRLANDLTEILVRHVNRIRFQTKTASRGPIEHTSANHEEPMVPRKRARPLRYIEELDHPDSRFTTPPRRPNRDNATHGSRTFSHRSSLPHNFE-STRPQRRRRLVRYAQSEESDDDDVQELHRMDRPRRSKEIRGNLNDDKAYEYMERAALQKEEERRIQREFEEAEKQKAXXXXXXXXXXXDPDFVPKVICPKPYVRERALNSDFASLTPVITEPDDDTDTEHYRKWNARRVRKAIHDDKKTVPPVQKQCLIFPVGRKTRLVRDIIVNTELMRSLAEKRQHHQNYKRILHALPIIPKEYRETGGRSWIDFEITEGFRKASSEP-LFHNDSNKQH 399
            MQRHP GCDP ++    S   P   R+ AR R S+DP L +LPGMQTAL ELER GPSLYRGTI R N++RLA+DLT IL+ HVN+IR Q+K  S    +      +   V   R + L   E+ D P  R+      P+RD      +    R+SL H+ + + RP+RRRR   Y    ES+ D+  +  R  RPRR+KEIR NLNDD AYEY+  AA Q  E              K            + +   KV+ PKPYVRER L SD+ASLTP+ TE DDDTDTE YRKWNARRVRK  +        +++ C IFP+GRK RLV D++VN  LMR  A   Q       +L  LP IP      GG +  D E+T GFR +S++    + D N+QH
Sbjct:    1 MQRHPEGCDPSSYHTYSSHRKPATTRERARNRASWDPALITLPGMQTALRELERLGPSLYRGTIPRHNMDRLAHDLTSILLTHVNQIRTQSKRPSPTEPKREGVGDD---VRSSRIQSLGSKEDRDQPAGRYRLRRGAPSRDPTDEREKGVRQRNSLQHDIQDNARPRRRRRSAYYDDYSESEADE--QFRRSQRPRRTKEIRENLNDDLAYEYIAEAARQ--EXXXXXXXXXXXXXAKVAAEAVQSSDESEEEIFLKVVRPKPYVRERTLESDYASLTPISTERDDDTDTEMYRKWNARRVRKPAYAYGAQESSIRELCSIFPLGRKNRLVSDMLVNISLMRRSAAYGQRAIVNSSVLQRLPRIPSRCIVPGGWNVRDVELTHGFRSSSAKAESINRDLNRQH 397

The following BLAST results are available for this feature:

BLAST of Ggra7930.t1 vs. uniprot

BLAST of Ggra7930.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IW43	1.030e-74	44.31	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 214..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 481..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..505
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1029..1051
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 597..637
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 754..770
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 741..828
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 782..797
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1029..1067
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 807..828
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1052..1067

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:456139..459429 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7930.t1	Ggra7930.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 456139..459429 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7930.t1 ID=Ggra7930.t1|Name=Ggra7930.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1097bp
MQRHPSGCDPQAFRGRHSLNIPRQNARKRTSYDPVLESLPGMQTALGELE
RSGPSLYRGTIERSNLNRLANDLTEILVRHVNRIRFQTKTASRGPIEHTS
ANHEEPMVPRKRARPLRYIEELDHPDSRFTTPPRRPNRDNATHGSRTFSH
RSSLPHNFESTRPQRRRRLVRYAQSEESDDDDVQELHRMDRPRRSKEIRG
NLNDDKAYEYMERAALQKEEERRIQREFEEAEKQKAMIIDESSEDDDDPD
FVPKVICPKPYVRERALNSDFASLTPVITEPDDDTDTEHYRKWNARRVRK
AIHDDKKTVPPVQKQCLIFPVGRKTRLVRDIIVNTELMRSLAEKRQHHQN
YKRILHALPIIPKEYRETGGRSWIDFEITEGFRKASSEPLFHNDSNKQHP
ASVTSKTATPCSKDAANGNNTVLEQKKSTLHQTNIVYRPGETSGVKEAIN
TKEAVNVEPEVSSRQPLAHEQSGRDDAPSRKLNGWNQTPHGTSLLLNQGD
KRKVLTEPADTRTGKAATFILPRGEICPRKTQSHKPFRPRSVPVQRKELG
RDVNDVSQKYSSSITQRTDGIQTPSSIDPNVLHAVRSNSYQQNFRMPHNH
QMGLNSIQGGSSQMDDHYQQPVQPERQQQKHMQSIPTGPQTSTIAQVPPG
QAYLLPGGFQRPPSKEEIQAYQIILQRGLATPQPNPQLLQIQAFQEWQRQ
IRVQSIQQQQILQQQLQQRQLLMGNAAHGLTLTAQQVPQNSPGIIDQRSM
EHQFLVQPGHQASSGGEQRLHSTRGSDKSISIESRTKNGTARGALSNSIP
LRASEADMNGRQSTPVLRQSSPILPGTQTDFLAAQDQQTPLLATPSIRRQ
STPVSRQPSPILPGNQTFLAAQDQQTTLQATRSIRRQSTPVSRQSNPILS
GTQTGLLAVQDEQAMLQATPSISGNRSSSLQAHKFSQTSNALILPYSDAD
PDTDVRDYRAEERHKPRKLQAPKNMMTMINEVSTSVANPENTSEVQLVKT
RPAVMPTSSVKGVPGWQWERLNHLIAQTDGLSTVQNHQPELNATNTDQSD
GRNARDSFKDHQRQYQEDYRAQYELQLRKVMEEIRKRSGGTGAEHL*