Ggra7918.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7918.t1
Unique NameGgra7918.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length197
Homology
BLAST of Ggra7918.t1 vs. uniprot
Match: A0A2V3J511 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J511_9FLOR)

HSP 1 Score: 212 bits (539), Expect = 2.840e-67
Identity = 110/157 (70.06%), Postives = 132/157 (84.08%), Query Frame = 0
Query:   37 MSLTNDLIIKTVEVAAASLFTNSVAAKHISNNKTAT---QTAPPISKLVQEVFTQAAHIAAAVDNGAPSVRRWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAENHQFLSSLRAP 190
            MSLT+DL+IKTVEVAAAS FTNSVA +H+S N+  +   +T PP+  L+++V   A H+A +V +G  S +RWQKLAIC AIDLAGAGSLSFPFIGD+LDV YAPLSAVMV+AL+ASPL +ATAFAEEILP TDAFPTAT+AW+AENHQ+LSSL AP
Sbjct:    1 MSLTSDLLIKTVEVAAASFFTNSVATQHLSRNRNLSDTDETPPPLLALLRQVIALADHVADSVQSGGESAKRWQKLAICLAIDLAGAGSLSFPFIGDVLDVFYAPLSAVMVHALFASPLWAATAFAEEILPATDAFPTATIAWVAENHQYLSSLSAP 157          
BLAST of Ggra7918.t1 vs. uniprot
Match: R7QBM9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBM9_CHOCR)

HSP 1 Score: 116 bits (291), Expect = 6.060e-29
Identity = 67/175 (38.29%), Postives = 98/175 (56.00%), Query Frame = 0
Query:   33 RPSRMSLTNDLIIKTVEVAAASLFTNSVAAK----------HISNNKTATQTAPPISK------------LVQEVFTQAAHIAAAVDNGAPSVRRWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAENHQFLS 185
            R + MSLTNDL+IK +EV  A+    +   +             + +T  +   P S             +V+EV   A  +    + G P  ++W KLAIC  IDL G+GS++ P +GD LD+V APL+AVM+ AL+ S L++    AEE+LPGTD  PTAT+AW+AE + +L+
Sbjct:   48 RAASMSLTNDLLIKGLEVGVATFVGKAAGVQMPTGGQARRSEAQSGRTRKKKRRPSSSAEQRVEAEDVRGMVEEVVRVAGRVGEVAERGGPEAKKWVKLAICIGIDLVGSGSVAVPLVGDALDLVTAPLAAVMLQALFGSTLVTVGGLAEELLPGTDVIPTATLAWLAEYYGYLN 222          
BLAST of Ggra7918.t1 vs. uniprot
Match: R1CZS3 (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZS3_EMIHU)

HSP 1 Score: 77.4 bits (189), Expect = 2.920e-14
Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 0
Query:   76 PPISKLVQEVFTQAAHIAAAVDNGAPSVRRWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAENHQFLSSLR---APPP 192
            PP   L Q+             +  P   R  KL +   IDL G  S + P  G+  D+ +AP+SA++V  LY + +L+  AFAEE+LPG D  PTAT+ W+ EN +   S+    APPP
Sbjct:   50 PPRRALFQQTAALRVQTVWCSASPGPDNERLIKLLVSILIDLVGVASYAVPLAGEGADLAWAPVSALLVNYLYGNSILTGLAFAEEVLPGLDVVPTATIGWLLENTELGRSVNEASAPPP 169          
BLAST of Ggra7918.t1 vs. uniprot
Match: A0A7S3AG80 (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG80_9EUKA)

HSP 1 Score: 76.3 bits (186), Expect = 6.940e-14
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 0
Query:  108 KLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAENHQF 183
            KL I   IDL G  +  FP +G+  D+ +AP+SA+++  LY + L++  AFAEE+LPG D  PTAT+AW+ EN +F
Sbjct:   72 KLLISLLIDLIGMATYVFPLVGETGDLAWAPISALLINQLYGNALITGLAFAEELLPGLDIIPTATIAWVLENTEF 147          
BLAST of Ggra7918.t1 vs. uniprot
Match: F0YF75 (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YF75_AURAN)

HSP 1 Score: 72.0 bits (175), Expect = 1.960e-13
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 0
Query:  108 KLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAE 179
            KL +C AIDL GA + + P IG+  DV +AP+ A +V  L+ + L++  AF EEILPGTD  PTAT+AW  E
Sbjct:    3 KLILCVAIDLVGASTYAIPAIGEGFDVGWAPVQAALVNYLFGNGLITGFAFLEEILPGTDFIPTATIAWFYE 74          
BLAST of Ggra7918.t1 vs. uniprot
Match: A0A8J2F1R9 (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2F1R9_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 2.370e-13
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0
Query:  108 KLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPL-LSATAFAEEILPGTDAFPTATVAWIAENHQFL 184
            KL  C  +DL G  S   P  G+L D+ YAP+ A ++Y L+ +   ++A  FAEEILPGTD  PTAT+AW+ EN   L
Sbjct:   23 KLVFCLLLDLFGVASFLLPGFGELADISYAPVQAYLLYRLFNNSFRIAALGFAEEILPGTDVLPTATLAWVLENTSLL 100          
BLAST of Ggra7918.t1 vs. uniprot
Match: A0A7S2DVR4 (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DVR4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.480e-12
Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 0
Query:  104 RRWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAENHQF 183
            ++W KL +C  ID+ G  S   P IG+ +D+ +AP+   +++ ++ S +++  +F EEILPGTD  PTAT+AW  EN  +
Sbjct:   39 KKW-KLVVCLLIDIIGFSSFLLPIIGEAMDLFWAPIQTYLLWYMFGSVVVAGLSFTEEILPGTDFIPTATIAWTLENTDY 117          
BLAST of Ggra7918.t1 vs. uniprot
Match: D7FU98 (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU98_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.730e-12
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0
Query:   99 GAPSVRRWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAENHQ 182
            G   + R  KLAI   IDL G  S + P +G+  D+ +AP+S+ +++ LY + + +  AF EEILPG D  PTAT+AW   N +
Sbjct:   21 GTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSE 104          
BLAST of Ggra7918.t1 vs. uniprot
Match: A0A7S4A5C9 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5C9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.750e-12
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:  106 WQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAEN 180
            W KL  C  +DLAG  S   P +G+L DVVYAP+ A ++ AL+AS  ++A  FAEE+LP TD  PT T++W   N
Sbjct:   89 WAKLVGCLLLDLAGDASELIPGLGELTDVVYAPVEAGLLKALFASNAIAAFGFAEELLPFTDIIPTFTLSWCLAN 163          
BLAST of Ggra7918.t1 vs. uniprot
Match: A0A7S1HLC4 (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HLC4_HEMAN)

HSP 1 Score: 68.9 bits (167), Expect = 1.330e-11
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 0
Query:  105 RWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYASPLLSATAFAEEILPGTDAFPTATVAWIAE 179
            +W KLA+   ID  G  +   P +G+  D+ +AP+S+++++ +Y SPLLS  A  EE LP TD  PTAT+ W+ E
Sbjct:   31 KWWKLALSIMIDFIGMLTFLIPILGEFGDIFWAPMSSLLLFQMYGSPLLSGIALLEEGLPFTDLIPTATIGWLCE 105          
The following BLAST results are available for this feature:
BLAST of Ggra7918.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5112.840e-6770.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QBM96.060e-2938.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R1CZS32.920e-1437.50Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S3AG806.940e-1447.37Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
F0YF751.960e-1351.39Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2F1R92.370e-1347.44Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A7S2DVR41.480e-1240.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7FU982.730e-1241.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4A5C95.750e-1249.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1HLC41.330e-1142.67Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:432343..432933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7918.t1Ggra7918.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 432343..432933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7918.t1 ID=Ggra7918.t1|Name=Ggra7918.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=197bp
MPTTAFTAPLPLRPFHQRLVVGPFLSTSISRVRPSRMSLTNDLIIKTVEV
AAASLFTNSVAAKHISNNKTATQTAPPISKLVQEVFTQAAHIAAAVDNGA
PSVRRWQKLAICFAIDLAGAGSLSFPFIGDLLDVVYAPLSAVMVYALYAS
PLLSATAFAEEILPGTDAFPTATVAWIAENHQFLSSLRAPPPPPQS*
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