Ggra7924.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7924.t1
Unique NameGgra7924.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:442490..443194 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7924Ggra7924Gracilaria gracilis GNS1m malegenetig00000073_pilon 442490..443194 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7924.t1.start1Ggra7924.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000073_pilon 442490..442492 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7924.t1.CDS1Ggra7924.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000073_pilon 442490..443194 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7924.t1.exon1Ggra7924.t1.exon1Gracilaria gracilis GNS1m maleexontig00000073_pilon 442490..443194 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7924.t1.stop1Ggra7924.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000073_pilon 443192..443194 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7924.t1Ggra7924.t1Gracilaria gracilis GNS1m malepolypeptidetig00000073_pilon 442490..443194 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7924.t1 ID=Ggra7924.t1|Name=Ggra7924.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=235bp
MPHRHRRQHDVYDDTQYAPHASEEIPVQHYPHPARERRRRNRVPENQLSI
EPLHPMGEAMARMERDFARAFESPFGANMFGPMTGIMSSFDRMFDEFASA
SASAAGNGNYYYESSTTTLGPDGRVRQETVRTTPGADGNPETSRFVREGD
QVQSSDPYQRYRIEGSRRHPLDDEVVVEEVDEDDDCLNPRRRSDGRDRND
ASDEERLRANERAHRQNTATGWVRDRINRWRSRQ*
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spliced messenger RNA

>Ggra7924.t1 ID=Ggra7924.t1|Name=Ggra7924.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=705bp|location=Sequence derived from alignment at tig00000073_pilon:442490..443194+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCACACCGACACCGTCGTCAGCACGATGTCTACGATGACACTCAGTA
CGCCCCGCACGCCTCGGAAGAAATTCCCGTCCAGCACTACCCGCACCCAG
CTCGCGAGCGCCGTCGCCGCAACCGCGTACCAGAAAACCAGCTCTCCATA
GAGCCGCTGCATCCAATGGGCGAAGCAATGGCGAGAATGGAACGCGACTT
CGCCCGCGCCTTCGAGTCGCCTTTCGGAGCCAACATGTTCGGTCCAATGA
CAGGAATAATGTCATCTTTCGATCGAATGTTCGACGAGTTTGCTTCCGCT
TCTGCTTCTGCCGCTGGAAATGGTAATTACTATTACGAATCGAGCACCAC
TACGCTTGGACCGGATGGTCGTGTGCGACAGGAGACCGTTCGTACCACAC
CGGGTGCCGACGGAAACCCGGAAACTTCGCGCTTCGTCAGAGAGGGTGAT
CAAGTTCAAAGTTCTGATCCTTATCAAAGGTATAGGATTGAAGGTTCGCG
GCGTCATCCGCTtgatgatgaagttgttgttgaagaagttgatgaggatg
atgatTGTCTTAACCCGCGCCGTAGGAGCGACGGTAGAGATCGCAATGAC
GCTTCGGATGAGGAGCGACTTCGTGCCAATGAACGCGCCCATCGTCAGAA
TACCGCCACGGGTTGGGTTAGGGACAGGATCAATAGGTGGAGGTCGCGTC
AATAA
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protein sequence of Ggra7924.t1

>Ggra7924.t1 ID=Ggra7924.t1|Name=Ggra7924.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MPHRHRRQHDVYDDTQYAPHASEEIPVQHYPHPARERRRRNRVPENQLSI
EPLHPMGEAMARMERDFARAFESPFGANMFGPMTGIMSSFDRMFDEFASA
SASAAGNGNYYYESSTTTLGPDGRVRQETVRTTPGADGNPETSRFVREGD
QVQSSDPYQRYRIEGSRRHPLDDEVVVEEVDEDDDCLNPRRRSDGRDRND
ASDEERLRANERAHRQNTATGWVRDRINRWRSRQ*
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mRNA from alignment at tig00000073_pilon:442490..443194+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7924.t1 ID=Ggra7924.t1|Name=Ggra7924.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=705bp|location=Sequence derived from alignment at tig00000073_pilon:442490..443194+ (Gracilaria gracilis GNS1m male)
ATGCCACACCGACACCGTCGTCAGCACGATGTCTACGATGACACTCAGTA
CGCCCCGCACGCCTCGGAAGAAATTCCCGTCCAGCACTACCCGCACCCAG
CTCGCGAGCGCCGTCGCCGCAACCGCGTACCAGAAAACCAGCTCTCCATA
GAGCCGCTGCATCCAATGGGCGAAGCAATGGCGAGAATGGAACGCGACTT
CGCCCGCGCCTTCGAGTCGCCTTTCGGAGCCAACATGTTCGGTCCAATGA
CAGGAATAATGTCATCTTTCGATCGAATGTTCGACGAGTTTGCTTCCGCT
TCTGCTTCTGCCGCTGGAAATGGTAATTACTATTACGAATCGAGCACCAC
TACGCTTGGACCGGATGGTCGTGTGCGACAGGAGACCGTTCGTACCACAC
CGGGTGCCGACGGAAACCCGGAAACTTCGCGCTTCGTCAGAGAGGGTGAT
CAAGTTCAAAGTTCTGATCCTTATCAAAGGTATAGGATTGAAGGTTCGCG
GCGTCATCCGCTtgatgatgaagttgttgttgaagaagttgatgaggatg
atgatTGTCTTAACCCGCGCCGTAGGAGCGACGGTAGAGATCGCAATGAC
GCTTCGGATGAGGAGCGACTTCGTGCCAATGAACGCGCCCATCGTCAGAA
TACCGCCACGGGTTGGGTTAGGGACAGGATCAATAGGTGGAGGTCGCGTC
AATAA
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Coding sequence (CDS) from alignment at tig00000073_pilon:442490..443194+

>Ggra7924.t1 ID=Ggra7924.t1|Name=Ggra7924.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=705bp|location=Sequence derived from alignment at tig00000073_pilon:442490..443194+ (Gracilaria gracilis GNS1m male)
ATGCCACACCGACACCGTCGTCAGCACGATGTCTACGATGACACTCAGTA
CGCCCCGCACGCCTCGGAAGAAATTCCCGTCCAGCACTACCCGCACCCAG
CTCGCGAGCGCCGTCGCCGCAACCGCGTACCAGAAAACCAGCTCTCCATA
GAGCCGCTGCATCCAATGGGCGAAGCAATGGCGAGAATGGAACGCGACTT
CGCCCGCGCCTTCGAGTCGCCTTTCGGAGCCAACATGTTCGGTCCAATGA
CAGGAATAATGTCATCTTTCGATCGAATGTTCGACGAGTTTGCTTCCGCT
TCTGCTTCTGCCGCTGGAAATGGTAATTACTATTACGAATCGAGCACCAC
TACGCTTGGACCGGATGGTCGTGTGCGACAGGAGACCGTTCGTACCACAC
CGGGTGCCGACGGAAACCCGGAAACTTCGCGCTTCGTCAGAGAGGGTGAT
CAAGTTCAAAGTTCTGATCCTTATCAAAGGTATAGGATTGAAGGTTCGCG
GCGTCATCCGCTtgatgatgaagttgttgttgaagaagttgatgaggatg
atgatTGTCTTAACCCGCGCCGTAGGAGCGACGGTAGAGATCGCAATGAC
GCTTCGGATGAGGAGCGACTTCGTGCCAATGAACGCGCCCATCGTCAGAA
TACCGCCACGGGTTGGGTTAGGGACAGGATCAATAGGTGGAGGTCGCGTC
AATAA
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