Ggra7912.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7912.t1
Unique NameGgra7912.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1666
Homology
BLAST of Ggra7912.t1 vs. uniprot
Match: A0A2V3J5X2 (Mediator of RNA polymerase II transcription subunit 13 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5X2_9FLOR)

HSP 1 Score: 1940 bits (5026), Expect = 0.000e+0
Identity = 1044/1684 (62.00%), Postives = 1265/1684 (75.12%), Query Frame = 0
Query:    1 MQPPQTFKPPVSVSVLALQNLSTVPFIRLTLRPNPRTNPASPVARRAKWLEHGVGAQTAFPAVALALLAEQLPAAIASIVRPSAPKPPPKPARNLSPTALLWVFGATPTLEAAKSLLSDVFLVEEQGAWTAASPPLYTHAFTTAIHRAIVLALQSQGALRVANQVVHPSVRLSYSFSVSLSAPPESRIIIRVAVKNSKARKIADHDLLRDPKHPLHVVTAPLGTPAVLSARAPAGDALTESVLNRWREAGMYPSGPSSSVDLDSSVVFVKFENGLEAPFPRAVVLTNEPQSPAEPIKLTDVSRATLHPKKSTKASSLWKSRKRPRSPSPFSPPVQETNTTPTRPPKPPTCDEQPSESFIDDAPTAQSINAAIRSLQPGESKDSTPVLHHPLVEPVFPPVLSIS--NSELGMQNALKESKVAQVATTTANAVRN-----VAQEQKNEPILSSVQSMKNEPSTFAINTTNGLDSFPLDGDVSNAPDFLHGGGGMGMTDFSTL-DEVAEFFRDGMDDRLQEEEVSPPANENNAQPISENGQALTNDIVNDADTLQQTGKQGGQTTKMEVDSVPLDLSPTHLADKECQAAADDKLSTMSPTDLVRAALRSFQPPMVENKPQNPDIREKLTSFFEDDFTERRRARLCTSQRITKARRLSKLYNPQSRFRLLKTSEDKDAKGFLRNGE-----GVNNRSDSLRYRNSLYIPRKKLKAYSRLRQRGE-VKDPSFLRRESRWELSESDEEPDPQPKDTSKSSFSSTALLSLHQL--DRCTEKRDHQIALGDRNPETDALRLADSVAIDCASACYVLSADRTTLSGLSPALSENSFSLTSSQCVREEDQKPTSMIQMGHLANKKFPPHPSAKTYVPPLAGSPSGRSSTKRDGDAYNLMSLLEMQLFSMNELSLFRGNVSDSVD--SKERVSTETETDMVSSATMRRVLLGLPRALETSHAFKTCLESLGCGPKLAESTIRESCSSDPEAKFQSTEQSTPMVLGPLSINEYMGMSAAVFPLNPPKVCVGYLKEWMETFGGALPTWEKAGFEPYSERKNVEYVAIAPKEIQQDVDVFLRDVSSAYEECSFGTHTLFPFERVGFISNSMTDSASSE-NESATSLSEAERGMTEQYQLYVKALCTKLASLTRDSRKNRISAPTNIVAYVILPFEKRRSVANVALMRAVSPLVSAVPDAIPSGIGATLPIPNLPAAPWRASSSKGIVSLTVRILPREVVDRNLAGFVEADRMSDRPLRPQLMKAVSFAVFNSIRTKRVRMPSTDSEVASVLSRASLMPDDLMSPMTPDIATESPGGTSITPISPLGPSTEEAVSHTSQVTSQGLHVGHVDQSCALSPSFLYEPAVVLAGVGKHMGQTDSRADIVLHLAYTFCDATCRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFWGMWARGQRWRVSFVDEVHVTVSRLGQMTPGELEDWDWVIGKVMSSKSSLSEKSSDEDNGVSVVRRFPPLLQPKPDEVNDVYTEFSTPATPGVSQPTSSGAASKGTPSIDVKMPPVCSVSVVSVCHLETHLFLEESTDLNADRRDFAIVGRERLSRGKNVQATAVLVRYEKDGMKALEVNVLRHYGSTGHSDEMSDERSSWDSFDVQTIAHTIVSNFHELRYTASPPCWPAQKWLSMYPVHMDAIRGYQANLRQVHRHGFGAQVLGSR 1665
            M PPQ F PPVSVSVLAL+NL+ VPFIRLTLRP P+T   S VA RAKWLEHGVGAQTAFPA AL+LLAEQLPA + S+VRP+  KPP KP R    TA LWVFGA+  L +A +LL+D FLVEE+G W+A+SPP +THAFT AIHRAI LALQSQGALRVANQ+V P+VRLSYSFSV+LSAPPESRIIIRV VK+SKAR++ D DL RD K PLHV TAPLGT A+LS R PAGDALTESVL RWREAGM PS  SSS D+D++VVFVKF+NGLE PFPRAV+LTN+P +P E ++  +VS+ T   +K++K ++LWKSRKRPRSPSP +P    +   P    KP +   QP   F +DAPTAQS+NAA+RSLQP   KD+ PV+ HPLVE VFPP  S S  +     Q   +ES VA   T   N+         AQ QK+    ++ Q +K+EP   ++ T  GLDSF LD DV+   D    G  M M DF  L DE AEFF+DGMDDR+ +      ANE++    S N Q       ++ ++  +  K  G   KM+VDSVP +     +      + A+ +L  +SPT+LVRAA +SF     +N  +  D+R++L SFFEDDFTERRR RL TS+RI+K RRLSKLYNP+SR +LL+     D    L   +      +    + L+ R SLY+P KK+ A+S L ++GE V DP  L++ S  E+++SDEE D   ++ +K S+ S  +LSL +L  D   EK        DR  +++A ++A+SVAIDCAS C+VLS+DR++ +  SPA +E S++ +S   +RE+D K TS I +G  A K  PPHP+ KT +P ++ SP GRS+ KR+G+ +N++SL+EMQLFSMNEL LFR ++ D+ D    ++   E  TDMVSSATMRRVLLGLPRALETS  F+  LESL C    A++          ++  +      P VLGPLSI EYMG SA VFPLNPPKVC+GY KEWMETFGGALP WEKAG EPYSERKNVEYVA+APK+I+QDV VFL DVSS YEECSFG H +FPFE V FI+NSM +S S++  +SA  L+E E+ MTEQYQL+VKALCTKLASLTR++RKN I++PTNIVAYVI PF+K++  ANVAL+RA+SPLV+AVP A+PSGIG+T PIPNLPAAPWRAS SKGIVSLTVR+LPREVVDRNLAG V+ +R+++R LRPQL+KA+SFAVFNSIRTKRVR+PSTD EVA+VLSRASLMPDDLMSPMTPD+ TESPGG SITP+SPLG  TEE  +H+  +    LHVGHVDQSCALSPSFL+EPAVVLAGVGKHMGQTDSRADIVLHLAYTFC+A+ RFVFAWTDQRGELLD+ATVP++R AMTSSRRKAFWGMWARGQRWR+ +VDEVH TVSRLG +  GEL DW+WV+ KVMSSKSSLSEK +DED  V VVRRFPP  Q KP+EVNDVYTE STPATPGV+Q TSS   SK  PS+DVKMPPVCSVS++S+C+LETHLFLEES D NADRRDFAIVGRERLSRGKNVQA+AVL RYE+DG+KALEVN+LRHYGS GHS+EMSD RS WDS DVQ+IA+ I+SNFH+LRYT S P WPAQ+WLSMYPVH+DA+RGYQ+ LR +H +G G   +G R
Sbjct:    1 MHPPQPFNPPVSVSVLALKNLTAVPFIRLTLRPTPQTLSQSHVAARAKWLEHGVGAQTAFPAAALSLLAEQLPATLTSLVRPTQGKPPSKPGRAPLSTACLWVFGASHNLHSASTLLADAFLVEEEGVWSASSPPAHTHAFTAAIHRAIALALQSQGALRVANQIVQPAVRLSYSFSVTLSAPPESRIIIRVTVKHSKARRLTDRDLARDVKSPLHVFTAPLGTSAILSPRPPAGDALTESVLTRWREAGMLPSDHSSSPDVDTTVVFVKFDNGLEVPFPRAVILTNQPATPLE-VQKPEVSKMTTPLRKTSKIANLWKSRKRPRSPSPTAPIPDISVAAPPTTAKPTSNAVQP---FANDAPTAQSLNAALRSLQPKGQKDTLPVMLHPLVETVFPPTSSFSAEDGSTESQELKEESTVAANPTDAKNSTSGDSNPVTAQVQKDAEAPATEQPVKSEPVAGSLTTARGLDSFQLDVDVTTTQDVFDSGHEMDMADFGALEDEFAEFFQDGMDDRIPDVGSGALANESSTPLESGNAQTSLERNTSEVESKLRMEKTSGADAKMDVDSVPQEHDMDRVQATGNASGANGELDNLSPTELVRAAFKSFASKATQNNTEIVDVRKRLNSFFEDDFTERRRLRLSTSERISKRRRLSKLYNPKSRLQLLRACSASDVLSNLTEKKTSPVSDIKVAGEELK-RKSLYVPWKKIHAFSHLLRKGESVTDPVILKQASLSEIADSDEEGDSAIQEHAKKSYKSADILSLEELTSDSGNEKPLFSHITSDRQLDSEAFKIANSVAIDCASVCFVLSSDRSSHTSGSPAHNEYSYTHSSPTGIREDDPKYTSSIHLGQNAAKGLPPHPALKTQLPAVSSSPGGRSTLKREGELFNILSLIEMQLFSMNELCLFRNDLIDATDCLQMDKAPPELGTDMVSSATMRRVLLGLPRALETSQVFRPYLESLRCTKTPADNDGLRDDMPPTDSDSEELGVEVPSVLGPLSITEYMGKSAGVFPLNPPKVCIGYNKEWMETFGGALPLWEKAGLEPYSERKNVEYVAMAPKDIEQDVKVFLGDVSSVYEECSFGKHVIFPFEPVAFIANSMVESPSTDVRKSAGVLTEPEKAMTEQYQLHVKALCTKLASLTRENRKNPIASPTNIVAYVISPFKKKQKAANVALLRAISPLVNAVPGAVPSGIGSTPPIPNLPAAPWRASPSKGIVSLTVRVLPREVVDRNLAGVVDMERVNNRSLRPQLLKAISFAVFNSIRTKRVRIPSTDGEVANVLSRASLMPDDLMSPMTPDMVTESPGGASITPVSPLGNMTEEGGAHSGHIVPSSLHVGHVDQSCALSPSFLHEPAVVLAGVGKHMGQTDSRADIVLHLAYTFCEASSRFVFAWTDQRGELLDVATVPIIRTAMTSSRRKAFWGMWARGQRWRIPYVDEVHATVSRLGPLASGELSDWEWVMSKVMSSKSSLSEKIADEDISVPVVRRFPPPQQAKPEEVNDVYTEISTPATPGVAQTTSSAPGSKSAPSMDVKMPPVCSVSILSICNLETHLFLEESWDPNADRRDFAIVGRERLSRGKNVQASAVLARYEEDGIKALEVNILRHYGSAGHSEEMSDVRSPWDSLDVQSIANKIISNFHDLRYTGSSPSWPAQRWLSMYPVHIDAVRGYQSYLRLIHSNGSGFPAVGLR 1679          
BLAST of Ggra7912.t1 vs. uniprot
Match: R7QCF5 (MID_MedPIWI domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCF5_CHOCR)

HSP 1 Score: 1034 bits (2673), Expect = 0.000e+0
Identity = 684/1793 (38.15%), Postives = 992/1793 (55.33%), Query Frame = 0
Query:    3 PPQTFKPPVSVSVLALQNLSTVPFIRLTLRPNPRTNPASPVARRAKWLEHGVGAQTAFPAVALALLAEQLPAAIASIVRPSA-PK---PPPKPARNLSPTA----LLWVFGATPTLEAAKSLLSDVFLVEEQGAWTAASPPLYTHAFTTAIHRAIVLALQSQGALRVANQVVHPSVRLSYSFSVSLSAPPESRIIIRVAVKNSKARKIADHDLLRD--PKHPLHVVTAPLGTPAVLSARAPAGDALTESVLNRWREAGMYPSGPSSSVDLDSSVVFVKFENGLEAPFPRAVVLTNEPQSPAEPIKLTDVSRATLHP-------KKSTKAS--------------SLWKSRKRPRSPSPFSPPVQETNTTPTRPPKPPTCDEQPSE---------SFIDDAPTAQSINAAIRSLQPGESKDSTPVLHHPLVEPVFPPVLSISNSELGMQNALKESKVAQV----------------ATTTANAVRNVAQEQKNEPILSSVQSMKNEPSTFAINTTNGLDSFPLDGDVSNAPDFLHGGGGMGMTDFSTLDE-VAEFFRDGMDDRLQEEEVSPPANENNAQPISE---NGQAL----TNDIVNDAD---TLQQTGKQGGQTTK---MEVDS----VPLDLSPTHLADKECQAAADDKLSTMSPTDLVRAALRSFQPPMVENKPQNPDIREKLTSFFEDDFTERRRARL----CTSQRITKARRLS-KLYNPQ------SRFRLLKTSEDKDAKGFLRNGEGVNNRSDSLRYR-NSLYIPRKKLKAYSRLRQRGEVKDPSFLRRESRWELSESDEEP-----DPQPKDTSKSSFSSTALLSLHQLDRCTEKR-----------DHQIALGDRNPETDALRLADSVAIDCASACYVLSADRTTLSGLSP---------ALSENSFSLTSSQCVREEDQKPTSMIQMGHLANKKFPPHPSAKTYVP-PLAGSPSGR--SSTKRDGDAYNLMSLLEMQLFSMNELSLFRGNVSDSVDSKERVST----------ETETDMVSSATMRRVLLGLPRALETSHAFKTCLESLGCGPKLAESTIRESCSSDPEAKFQSTEQSTPM--VLGPLSINEYMGMSAAVFPLNPPKVCVGYLKEWMETFGGALPTWEKAGFEPYSERKNVEYVAIAPKEIQQDVDVFLRDVSSAYEECSFGTHTLFPFERVGFISNSMTD-SASSENESATSLSEAERGMTEQYQLYVKALCTKLASLTRDSRKNRISAPTNIVAYVILPFEKRRSVANVALMRAVSPLVSAVPDAIPSGI---GATLPIPNLPAAPWRAS-SSKGIVSLTVRILPREVVDRNLAGFVEADRMSDRPLRPQLMKAVSFAVFNSIRTKRVRMPSTDSEVASVLSRASLMPDDLMSPMTPDIATESPGGTSITPISPLGPSTEEAVSHTSQVTSQGLHVGHVDQSCALSPSFLYEPAVVLAGVGKHMGQTDSRADIVLHLAYTFCDATCRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFWGMWARGQRWRVSFVDEVHVTVSRLGQMTPGELEDWDWVIGKVMSSKSSLSEKSSDEDNGVSVVRRFPPLL-QPKPDEVNDVYTEFSTPATPGVSQPTSSGAASKGTPSIDVKMPPVCSVSVVSVCHLETHLFLEESTDLNADRRDFAIVGRERLSRGKNVQATAVLVRYEKDGMKALEVNVLRHYGSTGHSDEMSDERSSWDSFDVQTIAHTIVSNFHELRYTASPPCWPAQKWLSMYPVHMDAIRGYQANLRQVHRHGFGAQVLG 1663
            P   + P VSVS +   NL+ + + R +  P  R +  SP+  RA++LEHG+G+  A P  A ALL E LP  + +++ P+  PK   P  K  R+ SP A     LWVF     L  +K LL+ VF + + G W  +SPP  T AF  A+ R+I +AL+S+G   + ++++HPS  L+YSFS+S+ +P E  ++ R+ V  S AR + D D       +H + V+ APLGT AVL+ARA AGDAL+ SV+ RWREAG+ P G       D +VVF+K  +G + PFPR  VLT +P  P   I     S A           + S  A               S  +SRKRPRSP      V     T  +P K       P +          F  DAPTA+S+N A+   +     +  PVLHHPL   + PP       E+G     +    ++                 + T AN   N+AQ + ++  +S+   + N   T    ++ GLD+F LDGD S        G GM MTDF+  D+ V +FF + +DDRL       P  +N   P+SE   +G++L    TN I   AD   +L Q+   G +  +   ME+D+     P D   T        A ++D ++      +  + LR  +  ++ ++P N  +  +L+  FEDD  ERR  RL       +R T+++ ++ KL  P       +R+    T  +  A   L   +     S+  R     +YIPR+KLKA+ RLR+ G+        RES   LS+S++       D + + T+ + +S     +  + +   E+            D Q        E  ++++ D VA+DC SAC VL++ +      SP         A +ENS    S + +RE+    ++    G +     PP+ +A    P     SP     +  KR+ +   L+++LEMQ FSM+EL LFR    + V  K +             E   + VSSAT+R V+ GLPR L TS AF +C                        A+ +S  +  P   + GPLS+N+ +G +++VFPL  P+VCVGY  +W+ET  G LP WEK G EPYSERKNVEYVA+APK+++ DV +FLRD+S+AYEECSFG H+  PF+ V  ISNSM         ++   LS+ ++ M EQY L +  LCTKL ++TR+ RKN     TNIVAY++ P+E     ANVAL++AV+PLVS++P  +PS +   G+ +   +LP APWR+S +SK +VS+TVR+LPREVV+R L G V+   + ++ LRPQLMKAVSFAVF+SIR+KRVR    D +VA V++R +LMPDDLMSPMTPDI  ESPG     P+SP G  TEE V  +    S  L    +DQS ALSPSFL+EPA+VL+GVGKH+GQ D+RADIVLHLAY+FC+++ R+VF WT QRGE+LDIATVP+ + A+ +SRRKAFW MW RGQRW++ +V ++H TV++LG +  GE++DW+WV+ KVM +K++ ++K S++     V+RRFPPL+ QP+ +++ D+Y++  TPATPG     + GA SK + S++ KMP + SVS+++VC  +    L      + ++  F +V  +  S  +   A+AVL R+E+  + A+++NV RHYG     ++M D+RS WD+  V+TIA  I SNFH+LRY  +PP WP   W+S YP+H+D +R +Q  +  VH   FG  +LG
Sbjct:    5 PRDPYAPDVSVSAITFSNLTNIHYARFSHTPT-RPHLNSPLHSRARYLEHGLGSSLALPTAAAALLQESLPGTLPALLVPTPLPKSTAPSAKHHRSSSPAASVQPTLWVFAPATLLARSKDLLAPVFAIADTGVWHPSSPPAPTEAFLAALRRSIPIALRSEGVRVLGDRLIHPSAGLAYSFSLSVLSPAEPTVVARLRVSKSLARHLQDPDSAAALAGEH-IPVLAAPLGTSAVLAARAIAGDALSASVIARWREAGLLPPGNLE----DDAVVFLKMSDGHDVPFPRVCVLTEQP--PRSIISQASASSALXXXXXXKNGAQNSVPADXXXXXXXXXXXXXKSPARSRKRPRSPGSAMSDVPADVKTEPKPEKTSASRSLPHQLDPLATLRDRFAADAPTAKSLNDALELARKEGKAEPVPVLHHPLAHGIPPPSFEHHEDEVGKHTKTENDTTSETHNSPTAGTKTSGADAESNTKANRSSNIAQPEDDQKQVSAEAPVPN--ITKRSGSSEGLDAFLLDGDTSGEQGGFDSGPGMDMTDFTAFDDDVTKFFGNSIDDRL-------PGTDN---PLSEPDVSGRSLPPEQTNSIGRSADQDASLSQSNSDGSKLVRDSDMEIDTDEHKPPKDTRTTTGRGAGRSAFSEDVMA------MALSVLRKQR--VMASRPDNKAVNSELSGIFEDDLVERRLGRLRPVGAIGKRHTRSKLIARKLLVPSKADVYSTRYTPSTTVSNSTALYGLPPQKPCKAYSEPSRLSLMDMYIPRRKLKAFMRLRKTGKP-----FTRESTLTLSDSEDSDSSDCEDEETRPTNSNIYSGVGRNANGKTENIVEESRKHSAHATGHTDWQAKGHSGKSEPSSVKIVDMVAVDCVSACMVLASSQLLPLSFSPVSYESESPSAAAENS---ESGEPLREDVGAKSTESHDGDIK----PPNSAASRSQPITQVASPVSLPVAVAKREREMLALLTILEMQAFSMSELDLFRD---EKVSQKRKAFALGSRQDPAPREESQNTVSSATVRCVVHGLPRILNTSRAFGSC-----------------------SAELRSLHKEVPAMEIRGPLSVNDVLGGNSSVFPLERPRVCVGYNNDWIETPSGVLPLWEKTGLEPYSERKNVEYVAVAPKDMESDVRLFLRDLSAAYEECSFGRHSAMPFDAVTLISNSMVKPDPRGLMKNPDLLSDVDKAMAEQYHLAITGLCTKLDAVTREHRKNASGVATNIVAYIVSPYENGDMAANVALLKAVAPLVSSIPGTVPSTVAMFGSNVLGGSLPPAPWRSSPASKSVVSITVRVLPREVVNRQLCGHVQIRCLLEKSLRPQLMKAVSFAVFSSIRSKRVRTSLIDGDVAGVIARTALMPDDLMSPMTPDIVAESPGAPPAAPVSPKGTLTEENVG-SPPTNSAALPHAFIDQSVALSPSFLHEPAIVLSGVGKHLGQVDARADIVLHLAYSFCESSSRYVFVWTSQRGEMLDIATVPISKFAVAASRRKAFWCMWVRGQRWKIPYVKDIHATVTKLGPLVEGEVDDWEWVLAKVMRAKAASADKHSEDQPDEKVIRRFPPLVDQPRGEDIADLYSDHPTPATPGNLHHANPGATSKPSISLETKMPGISSVSILNVCEADEQFLLAPGEKSDTNQCGFVLVSLDSTSGRRKPLASAVLARFEEKDITAIQLNVFRHYGKERQGEDMVDDRSPWDAAAVETIASNIASNFHDLRYVGAPPSWPQSHWMSSYPIHLDVVRRFQRQVEFVHASAFGPDILG 1730          
BLAST of Ggra7912.t1 vs. uniprot
Match: A0A7S1XCG5 (Mediator of RNA polymerase II transcription subunit 13 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCG5_9RHOD)

HSP 1 Score: 243 bits (619), Expect = 3.770e-61
Identity = 208/687 (30.28%), Postives = 307/687 (44.69%), Query Frame = 0
Query:  976 GPLSINEYMGMSAAVFPLNPPKVCVGYLKEWMETFGGALPTWEKAGFEPYSERKNVEYVAIAPKEIQQDVDVFLRDVSSAYEECSFGTHTLFPFERVGFIS--NSMTDSASS-ENESATSLSEAERGMTEQYQLYVKALCTKLASLTRDSRKNRISAPTNIVAYVILPFEKRRSVANVALMRAVSPLVSAVPDAIPSGIGATLPIPNLPAAPWR----ASSSKGIVSLTVRILPREVVDRNLAGFVEADRMSDR-PLRPQLMKAVSFAVFNSIRTKRVRMPSTDSEVASVLSRASLMPDDLMSPMTPDIATESPGGTSITPISPLGPSTEEAVSHTSQVTSQGLHVGHVDQSCALSPSFLYEPAVVLAGVGKHMGQTDSRADIVLHLAYTFCDATCRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFWGMWARGQRWRVSFVDEVHVTVSRLGQMTPGELEDWDWVIGKVMSSKSSLSEKSSDEDNGVSVVRRFPPLLQPKPDEVNDVYTEFSTPATPGVSQPTSSGAASKGTPSIDVKMPPVCSVSVVSVCHLETH-LFLEESTDLNADRRDFAIVGRERLSRGKNVQATAVLVRYEKDGMKALEV-NVLRHYGSTGHSDEMSDERSSWDSFDVQTIAHTIVSNFHELRYTASPPCWPAQKWLSMYPVHMDAIRGYQANLRQV 1652
            GPLS+NE   +      L   +VCVG   +W+E     LP WEK G EPYS RK+V Y+ +APK +     VF RD+ + YEECSFG H     + +  I   N   D+    E+      +EAE  + ++Y      +  KL   TR    N       ++ YV+ PF     +AN  L+ A++PL         SG+            PW+    A      +  T+R++  ++V          + +SD  PLRPQLMKA++ +V+NS++ K++        + S     +    ++MSP+TP+ A  SPG    T ++  G     AV  T ++    L             S LYEP  VLAGVG H+G+  +   +VL L+Y +  +  R+V   +D RG+++D    PV+ +     R K F  MW R  RW VSFV  V + V + G +T  E+ DW + I           E+       +S   RF              +    +PA  G  +P      S  +P  D +  P CS+SVVS    ET+ L L +  D  A R    ++GRE  +         V V    DG  A  + ++  H+G     D   D    WDS+DV  I   I  NF ELR  + PP WP+ +W   +P H+ A+   Q  +  V
Sbjct:  765 GPLSLNE---VPTTHVVLEVGRVCVGLDGDWLEASPQILPLWEKVGLEPYSGRKHVSYIVLAPKILATAAAVFFRDLGTMYEECSFGLHQAASLDSIILIGDGNDRIDAFYDVEDRDHVFPNEAEAKLLDRYSDAAAGVALKL---TRHGGGNG----GRLLVYVVSPFPAAHQMANARLLAALAPLAGIGRGGQGSGL-----------VPWQDPQTAQELASKLPATIRLISPDLVSSQ-------EMVSDGLPLRPQLMKALACSVYNSLKGKQLNASPDVDAILSSCGSVAKSKSEMMSPVTPEQAVCSPGSAVPTAVAGGG----MAVDTTDELAEFSL--------AKSGSSSLYEPHAVLAGVGSHVGEYGADGGLVLLLSYCYVSSCMRYVCTLSDSRGDVMDSFVSPVLESESQEGRLKMFSLMWDRCSRWMVSFVKVVRLVVIKFGFLTESEVNDWIFFI-------EGQKERWVGAGIDISPSLRF-----------GGSFKSRESPANQG-EKPMRE--RSTDSPFCDSEKVP-CSISVVSA--QETNCLQLLDGKDREA-RAVALLMGREDAA-----SEACVFVSELGDGKVAPTLLSLWCHFGLPMEDDNRED--CPWDSYDVSRILLRIAENFQELRSLSIPPSWPSSRWSGRWPRHIRALDDMQRTVSAV 1379          
BLAST of Ggra7912.t1 vs. uniprot
Match: A0A7S2ZQM2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQM2_9RHOD)

HSP 1 Score: 234 bits (598), Expect = 7.970e-59
Identity = 196/701 (27.96%), Postives = 316/701 (45.08%), Query Frame = 0
Query:  966 STEQSTPMVLGPLSINEYMGMSAAVFPLNPPKVCVGYLKEWMETFGGALPTWEKAGFEPYSERKNVEYVAIAPKEIQQDVDVFLRDVSSAYEECSFGTHTLFPFERVGFISNSMTDSASSENESATSLSEAE-RGMTEQYQLYVKALCTKLASLTRDSRKNRISAPTNIVAYVILPFEKRRSVANVALMRAVSPLVSAVPDA----IPSGIGATLPIPNLPAAPWRASSSKGIVSLTVRILPREVVDRNLAGFVEADRMSDRPLRPQLMKAVSFAVFNSIRTKRVRMPSTDSEVASVLSRASLMPDDL--MSPMTPDIATESPGGTSITPISPLGPSTEEAVSHTSQVTSQGLHVGHVDQSCALSPSFLYEPAVVLAGVGKHMGQTDSR-ADIVLHLAYTFCDATCRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFWGMWARGQRWRVSFVDEVHVTVSRLGQMTPGELEDWDWVIGKVMSSKSSLSEKSSDEDNGVSVVRRFPPLLQPKPDEVNDVYTEFSTPATPGVSQPTSSGAASKGTPSIDVKMPPVCSVSVVSVCHLETHLFL-------EESTDLNADRRDFAIVGRERLSRGKNVQATAVLVRYEK------DGMKALEVNVLRHYGSTGHSDEMSDERSSWDSFDVQTIAHTIVSNFHELRYTASPPCWPAQKWLSMYPVHMDAIRGY 1645
            S++  T  + GP+ I+       +V  L+PP+VC G+  +W+ET    +P WEKA  EP+S+ K V +  IAP  ++++ + F RD+ ++Y+ECS G H         ++     D    E E   +    E   + + Y++ V +   K+ +  RD +        N V YVI P   R      AL+R+++ L+S   DA    IPS IG                   G+  L ++ILP+E++     G ++ +R    P+R QL+K+ +F+V+N +R+K V   S   +     +  S+  D +   SP+TP+ A  S  G    P +    +   AV   S   +         Q  A S SFLYEPA+ L GVGK    T+    D++LHL Y +C    R+ +AWTD RGE LD+A++          RR  F  M  RGQRW + +V  + V +S++G +   E EDWD+V+ K++ + +  SE          + RRFPP ++    ++N+           G    T       G      +   V     VS+  L+   +        EE++     +RD  +   E    G   +A A ++R  +           L V +  H+G         D+R   D  D + +   +  N ++L    SPPCWP   W   +P+H+ A+R +
Sbjct:  602 SSKSKTIEIQGPVCIDS---KPFSVTVLDPPQVCTGFRGDWIETSNCIIPFWEKACLEPFSDEKYVVFGVIAPSYLEKESERFFRDLKTSYQECSLGKHQGLAGSGYFYV-----DCLGMEAEELGTKDMGEYSSIIDAYRMEVSSCAAKMTA-QRDRKVEE-----NFVVYVIPPVRFRDDKRLGALIRSLASLLSPAVDADGELIPSLIG-------------------GVRQLQLKILPQELLRPPSEGVMDTNRW---PVRAQLIKSYAFSVYNMLRSKTV---SAKDDGPRHQTSKSIGYDQIEFWSPVTPEYAGMSLAGN--LPTAKHNGTGNSAVEEWSPPANLASLASTAVQE-ASSVSFLYEPAMTLTGVGKQSEGTEGNPGDMLLHLCYKYCPEAQRYSYAWTDSRGEFLDVASLSCAADTGRQMRRVYFSLMLGRGQRWHLPYVRGLGVVISKVGPLQSSECEDWDFVVRKLLEATTEESE--------TLLCRRFPPEVK----QMNEAE---------GFGNSTKENRPVLGFYPDKFQQDFVQVFRSVSLLELDEDQYFRTLPLPSEETSQSATRQRDLLVAIPESGCGGS--EAAAYILRSPRTLADTDSRSGVLRVRLYTHFGIPD-----LDKRPEVDGADARAVTMYLAKNLYDLCAVGSPPCWPLDAWQPRWPIHVQAVRSH 1232          
The following BLAST results are available for this feature:
BLAST of Ggra7912.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5X20.000e+062.00Mediator of RNA polymerase II transcription subuni... [more]
R7QCF50.000e+038.15MID_MedPIWI domain-containing protein n=1 Tax=Chon... [more]
A0A7S1XCG53.770e-6130.28Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2ZQM27.970e-5927.96Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009401Mediator complex subunit Med13, C-terminalPFAMPF06333Med13_Ccoord: 1348..1641
e-value: 1.0E-8
score: 34.9
IPR041285MID domain of medPIWIPFAMPF18296MID_MedPIWIcoord: 1029..1141
e-value: 2.0E-7
score: 31.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..734
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1480..1503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1480..1502
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..743
NoneNo IPR availablePANTHERPTHR10791RAG1-ACTIVATING PROTEIN 1coord: 992..1446
NoneNo IPR availablePANTHERPTHR10791:SF181MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13coord: 992..1446

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:419494..424491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7912.t1Ggra7912.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 419494..424491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7912.t1 ID=Ggra7912.t1|Name=Ggra7912.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1666bp
MQPPQTFKPPVSVSVLALQNLSTVPFIRLTLRPNPRTNPASPVARRAKWL
EHGVGAQTAFPAVALALLAEQLPAAIASIVRPSAPKPPPKPARNLSPTAL
LWVFGATPTLEAAKSLLSDVFLVEEQGAWTAASPPLYTHAFTTAIHRAIV
LALQSQGALRVANQVVHPSVRLSYSFSVSLSAPPESRIIIRVAVKNSKAR
KIADHDLLRDPKHPLHVVTAPLGTPAVLSARAPAGDALTESVLNRWREAG
MYPSGPSSSVDLDSSVVFVKFENGLEAPFPRAVVLTNEPQSPAEPIKLTD
VSRATLHPKKSTKASSLWKSRKRPRSPSPFSPPVQETNTTPTRPPKPPTC
DEQPSESFIDDAPTAQSINAAIRSLQPGESKDSTPVLHHPLVEPVFPPVL
SISNSELGMQNALKESKVAQVATTTANAVRNVAQEQKNEPILSSVQSMKN
EPSTFAINTTNGLDSFPLDGDVSNAPDFLHGGGGMGMTDFSTLDEVAEFF
RDGMDDRLQEEEVSPPANENNAQPISENGQALTNDIVNDADTLQQTGKQG
GQTTKMEVDSVPLDLSPTHLADKECQAAADDKLSTMSPTDLVRAALRSFQ
PPMVENKPQNPDIREKLTSFFEDDFTERRRARLCTSQRITKARRLSKLYN
PQSRFRLLKTSEDKDAKGFLRNGEGVNNRSDSLRYRNSLYIPRKKLKAYS
RLRQRGEVKDPSFLRRESRWELSESDEEPDPQPKDTSKSSFSSTALLSLH
QLDRCTEKRDHQIALGDRNPETDALRLADSVAIDCASACYVLSADRTTLS
GLSPALSENSFSLTSSQCVREEDQKPTSMIQMGHLANKKFPPHPSAKTYV
PPLAGSPSGRSSTKRDGDAYNLMSLLEMQLFSMNELSLFRGNVSDSVDSK
ERVSTETETDMVSSATMRRVLLGLPRALETSHAFKTCLESLGCGPKLAES
TIRESCSSDPEAKFQSTEQSTPMVLGPLSINEYMGMSAAVFPLNPPKVCV
GYLKEWMETFGGALPTWEKAGFEPYSERKNVEYVAIAPKEIQQDVDVFLR
DVSSAYEECSFGTHTLFPFERVGFISNSMTDSASSENESATSLSEAERGM
TEQYQLYVKALCTKLASLTRDSRKNRISAPTNIVAYVILPFEKRRSVANV
ALMRAVSPLVSAVPDAIPSGIGATLPIPNLPAAPWRASSSKGIVSLTVRI
LPREVVDRNLAGFVEADRMSDRPLRPQLMKAVSFAVFNSIRTKRVRMPST
DSEVASVLSRASLMPDDLMSPMTPDIATESPGGTSITPISPLGPSTEEAV
SHTSQVTSQGLHVGHVDQSCALSPSFLYEPAVVLAGVGKHMGQTDSRADI
VLHLAYTFCDATCRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFWGM
WARGQRWRVSFVDEVHVTVSRLGQMTPGELEDWDWVIGKVMSSKSSLSEK
SSDEDNGVSVVRRFPPLLQPKPDEVNDVYTEFSTPATPGVSQPTSSGAAS
KGTPSIDVKMPPVCSVSVVSVCHLETHLFLEESTDLNADRRDFAIVGRER
LSRGKNVQATAVLVRYEKDGMKALEVNVLRHYGSTGHSDEMSDERSSWDS
FDVQTIAHTIVSNFHELRYTASPPCWPAQKWLSMYPVHMDAIRGYQANLR
QVHRHGFGAQVLGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009401Med13_C
IPR041285MID_MedPIWI