Ggra7919.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7919.t1
Unique NameGgra7919.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length282
Homology
BLAST of Ggra7919.t1 vs. uniprot
Match: A0A2V3J558 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J558_9FLOR)

HSP 1 Score: 319 bits (818), Expect = 1.390e-106
Identity = 167/281 (59.43%), Postives = 197/281 (70.11%), Query Frame = 0
Query:    1 MLNEAISATQDALSRTQLQKLRRESTVPVSND-SRLSSRFRVHGWRWHHLGIIRDLTRLENNALSKRQRLCSVQDVRESRSLRRQMYDAFQYIMRDNWALHNIVENKLFLPWVMSAEQSGLNADAVNVIGNERRRLQRHAQLVDDRVAKWSETSEYNPSKLTQQTCESELQGIVHSIRRLRRNASLLFDVSEQILIPTVKLTFSEAQQLRFNSTVLKHISGKQARISLVVFRDAVDLKHAVVADSEDALNFERDVPGPIRKLGVPFWRKRFVADRIRFLTE 280
            ML +AISATQD  SR QL +LRR          S  S+RFRVHGWRWHHL IIRDL RLENNA  KR RLCS Q+   S SLRRQM  A QYI+RDNWALHN VE+ LFLPW+   E   +  D V+V+  ER+RL++HA  ++ RV  WS T  Y  +      CESEL  I+ +I+RLRRNAS LF  SEQ  +P VK  FSE++QL+FNS VLKHISGKQAR+SLV+FRD VD+   VVA   D  NFERDVP PIR++GVPFWR RFV ++ RFLTE
Sbjct:    1 MLPDAISATQDLFSRVQLNRLRRSQAASTQQAASPQSARFRVHGWRWHHLSIIRDLIRLENNATRKRNRLCSAQNAPNSDSLRRQMKHAVQYIVRDNWALHNDVEHSLFLPWISDREPREMRRDYVDVVHRERQRLEQHAHALETRVTNWS-TFNYEHA----HQCESELHNIITAIQRLRRNASTLFKASEQFFVPRVKQLFSESEQLQFNSQVLKHISGKQARMSLVMFRDGVDMSEPVVALRNDLNNFERDVPAPIRRVGVPFWRSRFVGEKTRFLTE 276          
BLAST of Ggra7919.t1 vs. uniprot
Match: A0A1X6NS65 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS65_PORUM)

HSP 1 Score: 83.6 bits (205), Expect = 1.500e-14
Identity = 73/272 (26.84%), Postives = 115/272 (42.28%), Query Frame = 0
Query:   39 FRVHGWRWHHLGIIRDLTRLENNALSKRQRLCSVQDVRESRSLRRQMYDAFQYIMRDNWALHNIVENKLFLPWV------------------------------------MSAEQSGLNADAVNVIGNERRRLQRHAQLVDDRVAKWSE-TSEYNPSKLTQQTCESELQGIVHSIRRLRRNASLLFDVSEQILIPTVKLTFSEAQQLRFNSTVLKHISG----KQARISLVVFRDAVDLKHAVVADSEDALNFERDVPGPIRKLGVPFWRKR 269
            FR+HGWRWHH+ I R+L  ++  AL+     C   D   +      + DAF +     WA+HN +E  +  PW+                                      A Q  ++A A+   G ER RL+  +  V + + + +  T+E +        C  E +  V ++R L   A  LF   E  LIP V   FS  +Q R   T +  ++G      A++ LV+F +A+          E+  +F+R+VP P R   +P W+KR
Sbjct:  143 FRLHGWRWHHVAITRELAAIQT-ALAAGVN-CGDADAVAA------VVDAFAFARTSVWAVHNEMERAVLFPWIDTGLCAAPANGGAGGPPTSTAAVVGDARRGTPVAGRSEARQRAVSA-ALASFGAERERLEAASAEVQEHLMRLATATAERDAPWRGVAACGPETRRAVAAVRSLTDEARALFAAEEAALIPLVSNDFSPDEQARVFLTAVHGLAGGLRGSTAKLQLVLFHEALKAG----GGGEEWGHFKREVPRPARAW-IPVWKKR 400          
BLAST of Ggra7919.t1 vs. uniprot
Match: A0A1X6P4I7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4I7_PORUM)

HSP 1 Score: 57.8 bits (138), Expect = 6.710e-6
Identity = 49/194 (25.26%), Postives = 73/194 (37.63%), Query Frame = 0
Query:   29 VSNDSRLSSRFRVHGWRWHHLGIIRDLTRLENNALSKRQR----LCSVQDVRESRSLRRQMYDAFQYIMRDNWALHNIVENKLFLPWVMSAEQSGLNADAVNVIGNERRRL--QRHAQLVDDRVAKWSETSEYNPSKLTQQTCESELQGIVHSIRRLRRNASLLFDVSEQILIPTVKLTFSEAQQLRFNSTVLK 216
            VS+     + F +HGWRWHHL + RDL                 +CS      + +      D   +++  N+ +HN VE +L  PW+ S    G  A A       RRR    R A            T        T         G+  ++ RL  +A+ L+   E +LIP V    S   Q   N  +++
Sbjct:   63 VSSPPPTPAPFIIHGWRWHHLSVARDLAXXXXXXXXXXXXXXPPVCSAGGGATAAAT----LDGLNFLVAHNFGVHNTVEERLLFPWLASTLPRGHPAVAALPAFARRRRALADRLAAATXXXXXXXXXTGAAGAPADTPACRAVWGGGVAPALGRLAADAAALYAEEEALLIPAVAAHVSLGGQAALNRRIIR 252          
The following BLAST results are available for this feature:
BLAST of Ggra7919.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5581.390e-10659.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NS651.500e-1426.84Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P4I76.710e-625.26Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:433484..434329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7919.t1Ggra7919.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 433484..434329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7919.t1 ID=Ggra7919.t1|Name=Ggra7919.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=282bp
MLNEAISATQDALSRTQLQKLRRESTVPVSNDSRLSSRFRVHGWRWHHLG
IIRDLTRLENNALSKRQRLCSVQDVRESRSLRRQMYDAFQYIMRDNWALH
NIVENKLFLPWVMSAEQSGLNADAVNVIGNERRRLQRHAQLVDDRVAKWS
ETSEYNPSKLTQQTCESELQGIVHSIRRLRRNASLLFDVSEQILIPTVKL
TFSEAQQLRFNSTVLKHISGKQARISLVVFRDAVDLKHAVVADSEDALNF
ERDVPGPIRKLGVPFWRKRFVADRIRFLTEE*
back to top