Ggra7928.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7928.t1
Unique Name	Ggra7928.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	276

Homology

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BLAST of Ggra7928.t1 vs. uniprot
Match: A0A2V3IVZ1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ1_9FLOR)

HSP 1 Score: 363 bits (932), Expect = 5.260e-124
Identity = 195/277 (70.40%), Postives = 236/277 (85.20%), Query Frame = 0

Query:    1 MGQEQSSETQRGLAIPEGEGVQVVVGTRNREDEQSEAEKLLEESRSLPIPQPLLPPAPREDVSSALQGAQMMHELRSRIGDLISSAEEKGLLPSSSEPLPSPSSRSTDLSAS--PGDSAEKKRDQVDEIIGEADEKRSSLDDFRQAIDADVRVEQERWSRLGLDYEAVKTMMEACTGGKQMKEVLDRQKKIMALVVTTHEKSVRLKQAMDVNNHQARKTTRAIESLDKLNVTLSEVQDSLESAVATANILGASHFAHDEEMCSFKNFLKHNPPSFPE 275
            MGQEQSSE   GLAIPEGEGV  VVGT + E  + EAEKLL++SRSLP+PQPLL P PREDVSSALQGAQMM+ELRSRIG+LIS+AEEKGLLPSS E  PS S  S +L+AS   GD A +  D+VD+IIG+  +K+SS+D+F    +AD+R EQE+W+RLGLDYEAVK+M++ACT GK++KE+L  QK++MAL+VT +EKSVRLK+AMD NN+QARKTT+AIE LDK+NV+LSEVQ+SLESAVATANILGASHFAHD+EMCSFKNFLK++PP  PE
Sbjct:    1 MGQEQSSEQAGGLAIPEGEGVHFVVGTGSAESGRGEAEKLLDQSRSLPVPQPLLRPPPREDVSSALQGAQMMYELRSRIGELISTAEEKGLLPSSGEKQPSSSHGSAELTASFNTGDPAGEDDDRVDKIIGKEGQKQSSVDEFVLHSEADIRAEQEKWARLGLDYEAVKSMVDACTSGKEVKELLHNQKELMALIVTVYEKSVRLKEAMDANNYQARKTTKAIEGLDKINVSLSEVQESLESAVATANILGASHFAHDDEMCSFKNFLKYHPPRAPE 277

[Close]

BLAST of Ggra7928.t1 vs. uniprot
Match: R7Q5F0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5F0_CHOCR)

HSP 1 Score: 182 bits (463), Expect = 7.680e-53
Identity = 123/287 (42.86%), Postives = 168/287 (58.54%), Query Frame = 0

Query:    1 MGQEQSSETQRGLAIPEGEGVQVVVGTRNREDEQSEAEKL---LEESRSLPIPQPLLPPAPR--EDVSSALQGAQMMHELRSRIGDLISSAEEKGLLPSSSEPLP-SPSSRSTDLSASPGDSAEKKRDQVD----EIIGEADE----KRSSLDDFRQAIDADVRVEQERWSRLGLDYEAVKTMMEACTGGKQMKEVLDRQKKIMALVVTTHEKSVRLKQAMDVNNHQARKTTRAIESLDKLNVTLSEVQDSLESAVATANILGASHFAHDEEMCSFKNFLKHNPPSF 273
            MGQEQS       A  +  GV  V GT           KL   + +S SL +PQ +LPP PR  +++ SALQG  +MHEL      L+   EE       S  L  + +S STD   + G   +     VD    +  G A      +R+S+DD  + +  D R EQ RW+RLG+D   V  ++E CTGG +M  VL+RQ  ++  ++   EKSVRL  AM+ +   A++TT A+E LD++++ LS+VQD+LESAVATANILGASHF+HD+EMCSFKNFL+HNPP +
Sbjct:    1 MGQEQSIGGGNVPASSKDAGVHRVEGTGQSATSSQPTTKLDQVVAKSSSLNLPQQILPP-PRVKDEMPSALQGTLVMHELNRVFHSLLMGVEETPNSRVQSTTLEGTEASGSTDGHGTAGTPGQSDGSNVDGDGRKEEGHAGNNVLPERTSIDDLTRELSEDSRAEQNRWARLGIDEATVSAVLEQCTGGPKMASVLNRQALLLQQIMAAKEKSVRLNAAMEKHGVAAKRTTMALERLDRIHIALSDVQDNLESAVATANILGASHFSHDDEMCSFKNFLRHNPPKY 286

The following BLAST results are available for this feature:

BLAST of Ggra7928.t1 vs. uniprot

BLAST of Ggra7928.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IVZ1	5.260e-124	70.40	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q5F0	7.680e-53	42.86	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000073_pilon	contig	tig00000073_pilon:452906..453733 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7928.t1	Ggra7928.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000073_pilon 452906..453733 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7928.t1 ID=Ggra7928.t1|Name=Ggra7928.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=276bp
MGQEQSSETQRGLAIPEGEGVQVVVGTRNREDEQSEAEKLLEESRSLPIP
QPLLPPAPREDVSSALQGAQMMHELRSRIGDLISSAEEKGLLPSSSEPLP
SPSSRSTDLSASPGDSAEKKRDQVDEIIGEADEKRSSLDDFRQAIDADVR
VEQERWSRLGLDYEAVKTMMEACTGGKQMKEVLDRQKKIMALVVTTHEKS
VRLKQAMDVNNHQARKTTRAIESLDKLNVTLSEVQDSLESAVATANILGA
SHFAHDEEMCSFKNFLKHNPPSFPE*