Ggra7928.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7928.t1
Unique NameGgra7928.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length276
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:452906..453733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7928Ggra7928Gracilaria gracilis GNS1m malegenetig00000073_pilon 452906..453733 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7928.t1.stop1Ggra7928.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000073_pilon 452906..452908 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7928.t1.CDS1Ggra7928.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000073_pilon 452906..453733 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7928.t1.exon1Ggra7928.t1.exon1Gracilaria gracilis GNS1m maleexontig00000073_pilon 452906..453733 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7928.t1.start1Ggra7928.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000073_pilon 453731..453733 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7928.t1Ggra7928.t1Gracilaria gracilis GNS1m malepolypeptidetig00000073_pilon 452906..453733 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7928.t1 ID=Ggra7928.t1|Name=Ggra7928.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=276bp
MGQEQSSETQRGLAIPEGEGVQVVVGTRNREDEQSEAEKLLEESRSLPIP
QPLLPPAPREDVSSALQGAQMMHELRSRIGDLISSAEEKGLLPSSSEPLP
SPSSRSTDLSASPGDSAEKKRDQVDEIIGEADEKRSSLDDFRQAIDADVR
VEQERWSRLGLDYEAVKTMMEACTGGKQMKEVLDRQKKIMALVVTTHEKS
VRLKQAMDVNNHQARKTTRAIESLDKLNVTLSEVQDSLESAVATANILGA
SHFAHDEEMCSFKNFLKHNPPSFPE*
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spliced messenger RNA

>Ggra7928.t1 ID=Ggra7928.t1|Name=Ggra7928.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=828bp|location=Sequence derived from alignment at tig00000073_pilon:452906..453733- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCCAAGAGCAAAGCAGTGAAACGCAGAGGGGGTTGGCGATCCCTGA
AGGTGAAGGTGTGCAGGTCGTTGTCGGAACCCGAAACAGAGAGGATGAGC
AAAGTGAAGCTGAGAAGCTGTTGGAGGAGTCTCGATCACTACCAATTCCG
CAGCCTCTGTTACCACCGGCCCCTCGAGAAGATGTCTCGTCCGCCTTACA
AGGTGCGCAGATGATGCACGAGCTGCGAAGTCGGATTGGAGACCTAATCT
CGAGTGCAGAAGAAAAAGGGCTGTTACCCTCAAGTTCTGAACCCCTACCC
AGCCCGAGCTCCCGATCTACTGATTTATCAGCCAGTCCAGGAGACTCAGC
GGAGAAAAAGCGTGATCAGGTTGATGAAATCATTGGCGAAGCCGATGAAA
AGCGCTCGTCACTGGATGACTTCAGGCAAGCTATCGACGCCGATGTCCGG
GTAGAACAAGAAAGATGGTCACGCTTGGGACTTGATTACGAAGCTGTAAA
GACGATGATGGAAGCTTGTACAGGTGGAAAACAAATGAAAGAAGTCCTCG
ACCGTCAGAAGAAGATTATGGCCTTGGTAGTAACCACTCATGAGAAATCG
GTGAGACTAAAGCAAGCGATGGACGTAAACAATCATCAGGCAAGAAAGAC
CACCAGAGCCATAGAAAGTTTGGACAAGTTAAACGTGACGTTGTCAGAGG
TGCAGGATAGTCTTGAGTCAGCAGTCGCCACTGCCAACATTTTGGGGGCA
TCACATTTTGCCCATGATGAGGAGATGTGCTCGTTCAAGAACTTTTTGAA
GCATAATCCACCCTCATTCCCGGAGTAA
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protein sequence of Ggra7928.t1

>Ggra7928.t1 ID=Ggra7928.t1|Name=Ggra7928.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=276bp
MGQEQSSETQRGLAIPEGEGVQVVVGTRNREDEQSEAEKLLEESRSLPIP
QPLLPPAPREDVSSALQGAQMMHELRSRIGDLISSAEEKGLLPSSSEPLP
SPSSRSTDLSASPGDSAEKKRDQVDEIIGEADEKRSSLDDFRQAIDADVR
VEQERWSRLGLDYEAVKTMMEACTGGKQMKEVLDRQKKIMALVVTTHEKS
VRLKQAMDVNNHQARKTTRAIESLDKLNVTLSEVQDSLESAVATANILGA
SHFAHDEEMCSFKNFLKHNPPSFPE*
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mRNA from alignment at tig00000073_pilon:452906..453733-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7928.t1 ID=Ggra7928.t1|Name=Ggra7928.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=828bp|location=Sequence derived from alignment at tig00000073_pilon:452906..453733- (Gracilaria gracilis GNS1m male)
ATGGGCCAAGAGCAAAGCAGTGAAACGCAGAGGGGGTTGGCGATCCCTGA
AGGTGAAGGTGTGCAGGTCGTTGTCGGAACCCGAAACAGAGAGGATGAGC
AAAGTGAAGCTGAGAAGCTGTTGGAGGAGTCTCGATCACTACCAATTCCG
CAGCCTCTGTTACCACCGGCCCCTCGAGAAGATGTCTCGTCCGCCTTACA
AGGTGCGCAGATGATGCACGAGCTGCGAAGTCGGATTGGAGACCTAATCT
CGAGTGCAGAAGAAAAAGGGCTGTTACCCTCAAGTTCTGAACCCCTACCC
AGCCCGAGCTCCCGATCTACTGATTTATCAGCCAGTCCAGGAGACTCAGC
GGAGAAAAAGCGTGATCAGGTTGATGAAATCATTGGCGAAGCCGATGAAA
AGCGCTCGTCACTGGATGACTTCAGGCAAGCTATCGACGCCGATGTCCGG
GTAGAACAAGAAAGATGGTCACGCTTGGGACTTGATTACGAAGCTGTAAA
GACGATGATGGAAGCTTGTACAGGTGGAAAACAAATGAAAGAAGTCCTCG
ACCGTCAGAAGAAGATTATGGCCTTGGTAGTAACCACTCATGAGAAATCG
GTGAGACTAAAGCAAGCGATGGACGTAAACAATCATCAGGCAAGAAAGAC
CACCAGAGCCATAGAAAGTTTGGACAAGTTAAACGTGACGTTGTCAGAGG
TGCAGGATAGTCTTGAGTCAGCAGTCGCCACTGCCAACATTTTGGGGGCA
TCACATTTTGCCCATGATGAGGAGATGTGCTCGTTCAAGAACTTTTTGAA
GCATAATCCACCCTCATTCCCGGAGTAA
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Coding sequence (CDS) from alignment at tig00000073_pilon:452906..453733-

>Ggra7928.t1 ID=Ggra7928.t1|Name=Ggra7928.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=828bp|location=Sequence derived from alignment at tig00000073_pilon:452906..453733- (Gracilaria gracilis GNS1m male)
ATGGGCCAAGAGCAAAGCAGTGAAACGCAGAGGGGGTTGGCGATCCCTGA
AGGTGAAGGTGTGCAGGTCGTTGTCGGAACCCGAAACAGAGAGGATGAGC
AAAGTGAAGCTGAGAAGCTGTTGGAGGAGTCTCGATCACTACCAATTCCG
CAGCCTCTGTTACCACCGGCCCCTCGAGAAGATGTCTCGTCCGCCTTACA
AGGTGCGCAGATGATGCACGAGCTGCGAAGTCGGATTGGAGACCTAATCT
CGAGTGCAGAAGAAAAAGGGCTGTTACCCTCAAGTTCTGAACCCCTACCC
AGCCCGAGCTCCCGATCTACTGATTTATCAGCCAGTCCAGGAGACTCAGC
GGAGAAAAAGCGTGATCAGGTTGATGAAATCATTGGCGAAGCCGATGAAA
AGCGCTCGTCACTGGATGACTTCAGGCAAGCTATCGACGCCGATGTCCGG
GTAGAACAAGAAAGATGGTCACGCTTGGGACTTGATTACGAAGCTGTAAA
GACGATGATGGAAGCTTGTACAGGTGGAAAACAAATGAAAGAAGTCCTCG
ACCGTCAGAAGAAGATTATGGCCTTGGTAGTAACCACTCATGAGAAATCG
GTGAGACTAAAGCAAGCGATGGACGTAAACAATCATCAGGCAAGAAAGAC
CACCAGAGCCATAGAAAGTTTGGACAAGTTAAACGTGACGTTGTCAGAGG
TGCAGGATAGTCTTGAGTCAGCAGTCGCCACTGCCAACATTTTGGGGGCA
TCACATTTTGCCCATGATGAGGAGATGTGCTCGTTCAAGAACTTTTTGAA
GCATAATCCACCCTCATTCCCGGAGTAA
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