Ggra7905.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7905.t1
Unique NameGgra7905.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length456
Homology
BLAST of Ggra7905.t1 vs. uniprot
Match: A0A2V3J538 (Protein sof1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J538_9FLOR)

HSP 1 Score: 622 bits (1605), Expect = 1.410e-220
Identity = 343/455 (75.38%), Postives = 381/455 (83.74%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSAEYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVRELE 455
            M++RVLSRSDAEWSGRNDG  NRARFS N  P LH PQHPLDV RS+TAAKLNRILARPFLFAC+PSH DGVYCLARSR +++LLASAAADGE++LWHLP+H  RF L  TP AFVR ++FSHDS+RILFCTDAKLVH A V A+Y   P L   LH Y++NAGPLA+IHA+Y QP FATASSVVQ+W E+RS PIQ+LS+++DSLHCV+WNPVETSILASA SDRSI LYDVRAK PVR LVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKL+ +GAL+VHKDH AAVMSVDFSPTGQEFVTGSYDKTIRIFPYT GRSRE+YHTKRMQRVF                     VWKS+RSRPLKPLFAAEREKV  +DKLI RYQ L EVR+IAKKRHVPAHVRSMQ+TK+I+KKSA+RKE+NVRR        KKV ER+KNIVRELE
Sbjct:    1 MKIRVLSRSDAEWSGRNDGAQNRARFSKNVNPALHPPQHPLDVHRSVTAAKLNRILARPFLFACTPSHVDGVYCLARSRTDISLLASAAADGELKLWHLPTHSPRFQLTCTPPAFVRGVTFSHDSRRILFCTDAKLVHSANVHADYEQQPALKSQLHNYQANAGPLAAIHAHYAQPQFATASSVVQIWHETRSAPIQTLSTTIDSLHCVQWNPVETSILASAASDRSIVLYDVRAKLPVRSLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLTSKGALTVHKDHTAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTAGRSREIYHTKRMQRVFAVSFSLDASYLISGSDDGDVRVWKSDRSRPLKPLFAAEREKVHMSDKLIERYQGLPEVRRIAKKRHVPAHVRSMQLTKSIIKKSAQRKERNVRRHTAADKRPKKVTEREKNIVRELE 455          
BLAST of Ggra7905.t1 vs. uniprot
Match: A0A1X6NTY8 (Sof1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTY8_PORUM)

HSP 1 Score: 363 bits (932), Expect = 5.830e-118
Identity = 228/501 (45.51%), Postives = 304/501 (60.68%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSA----------------------EYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDR------------------------GALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVRELE 455
            M+++VLSRSDA W G +DG     R   NP   LH P  PL+  R++ AAK+ R+LARPFLF+ +P H DGVY LARSR + AL+ASA+ADGE++LWHLPS RA  A  P PRAF+R +SFSHDS R+L  +DAKL++  +V+                       E AA              + PL++I A+Y +P FATAS  V++WDE+RS P+Q L+  VDSLH V WNPVE  +LASA SDRS+TLYD+R +TP+R+LV+ +R N ++                       R+L                           GA +VHKDH  AVMSV +SPTG+EF +GSYD+T+R++    GRS+EVYHTKRMQ+  XXXXXXXXXXXXXXXXXXXXX      SRP+KPL   E+  ++ A  ++ R+ +L +VR+IAKKRHVP  +++ Q  +A +  +  RK +NV          K+  ER+++IVRELE
Sbjct:    1 MKVKVLSRSDASWKGTSDGPGAVRRTGRNPAAHLHPPSRPLEAVRALNAAKVGRMLARPFLFSLAPGHVDGVYGLARSRVSTALVASASADGELKLWHLPSQRAIAARTPLPRAFIRDVSFSHDSSRVLAVSDAKLIYAMRVATDGDALQTRAGPVEGVGGVYGGEETAAGAAAAAGGEMSYLASAPLSAIDAHYKRPLFATASDAVEVWDETRSEPLQRLTWGVDSLHTVSWNPVERDLLASAASDRSVTLYDIRERTPLRKLVMALRANAVAWNPMEAFNFTIGCDDGNCYSFDMRRLGGASGSKAKGPQTAGTARPRGGVGPAVGARAVHKDHVGAVMSVSYSPTGREFASGSYDRTVRLWDTEAGRSKEVYHTKRMQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPIKPLLPPEQAAINYATAVVERHAALPDVRRIAKKRHVPKPIKTAQRIRAEIAANEVRKHRNVVANSAKGAVPKRKPERQRSIVRELE 501          
BLAST of Ggra7905.t1 vs. uniprot
Match: M2X7R7 (U3 snoRNP component Sof1p n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X7R7_GALSU)

HSP 1 Score: 283 bits (725), Expect = 1.390e-87
Identity = 199/458 (43.45%), Postives = 280/458 (61.14%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNR--ARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISF-SHDSQRILFCTDAKLVHCAQVSAEYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVRELE 455
            M+++ LSRS+ EW     G      +R   NP P LH  +   + +R+I A KL+RI A+PFL+A    H +G+Y +A+SR N AL+AS +ADG++ LWHL   R         + FVR ISF S DS  +L C D K +   +  AE +   D +  +  Y S+ G +  + +++ +P FA+    V +W+  RSNP   LS   ++++ +R++ VET+ L   GSDR +TL+D+R++ PVR+LVLKM++N ++                       R +  + AL VH DH +AVMSVD+SPTG+EFV+GSYDKTIRIF      SREVYHTKRM    XXXXXXXXXXXXXXXXXXXXX WK+E S PLKPL   E+EK++   KL  RY  + +VRKIA++RHVP  +  ++  KA MKKS ERKE+N R          +++E+++ IV +L+
Sbjct:    1 MKVKALSRSEREWDPFLSGGAGSGVSRNIHNPDPVLHPFERAREYKRAINAVKLDRIFAKPFLYALE-GHVEGIYAVAKSRSNTALVASGSADGQVSLWHL-GRRGEVWSTSAHQGFVRGISFLSSDSDGLLTCGDDKTIKYWK--AEQSVG-DTLEPVRSY-SSCGMVTCVDSHWKEPVFASCGEGVDIWNLKRSNPYVHLSWDTETVYHIRFHSVETNWLLGCGSDRGLTLFDIRSEIPVRKLVLKMQSNSVAWNPIEPYLFTAANEDNNLYTFDLRYM--KHALKVHSDHVSAVMSVDYSPTGKEFVSGSYDKTIRIFGSQDKLSREVYHTKRMXXXXXXXXXXXXXXXXXXXXXXXXXXWKNEASTPLKPLLRNEKEKLNYEKKLKERYGFIPDVRKIARQRHVPKLIYKLKKQKAEMKKSKERKERNRRLHSKPGSSPAQLREKEQVIVGQLD 450          
BLAST of Ggra7905.t1 vs. uniprot
Match: L1JPF4 (DDB1- and CUL4-associated factor 13 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPF4_GUITC)

HSP 1 Score: 275 bits (702), Expect = 3.560e-84
Identity = 167/462 (36.15%), Postives = 256/462 (55.41%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFA-LAPTPRAFVRAISFSHDSQRILFCTDAKLVHC------AQVSAEYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVRELE 455
            M+++V+SR++++++   +  ++  +   NP P LH  +   + +R++ A KL+++ A+PF  + S  H+D + C ARS++ +  +AS + DGE+RLW L +  +R++ +A T   FVR ++FS D + +  C D KLV        ++V  E A  P+L                I  ++ +   AT    V +WD  RS P+ +LS   +S+  VR+NPVE ++LAS  SDRSI LYD+R  T +R+LVL  R+N +                        RK     AL VHKDH +AV+ VDF+PTG+EFV+GSYD+T+RIF Y  GRSREVYH KRMQR++                     +WK+  S  +KPL   E+ K++  DKL  R++  ++V++I++ RH+P  +      K I+K S +RKE NVR+          V ERKK IV+ELE
Sbjct:    1 MKVKVISRNESDYT--RERKSDIVKVFHNPDPALHPFERAREYKRALNAVKLDKVFAKPFARSLS-GHRDAISCFARSKQRLVDVASGSCDGELRLWDLSTGNSRWSTIAHT--GFVRGVTFSRDGENLWSCGDDKLVKMWGRDYESEVGEERAVEPELT------LMGQHAFLGIDHHWKESLIATCGVDVHIWDPQRSEPLHTLSWGSESVVSVRFNPVEHNVLASTASDRSIILYDIRTATSLRKLVLNKRSNRLCWNPMEAFNFVVANEDHNLYTFDMRKFDS--ALCVHKDHVSAVLDVDFAPTGREFVSGSYDRTVRIFKYNAGRSREVYHGKRMQRIWSVLFSGDAKWVLSASDDFNIRLWKANASESVKPLLPREQRKLEYLDKLKDRFKETADVKRISRHRHLPKAILKATKLKGIIKDSKKRKENNVRKHSKPGAVPY-VAERKKEIVKELE 448          
BLAST of Ggra7905.t1 vs. uniprot
Match: A0A7S1TBL6 (DDB1- and CUL4-associated factor 13 n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBL6_9RHOD)

HSP 1 Score: 270 bits (690), Expect = 2.450e-82
Identity = 194/462 (41.99%), Postives = 267/462 (57.79%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFS-----HDSQRILFCTDAKLVHCAQVSA-EYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSV-VQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVRELE 455
            M++RVLSRS  E++G  DG  +  R   NP P LH  +  ++ +R++ A KL R+ A+PF+      H DG Y LARSRR V+ + S +ADGE+ +W+L    A   +    R FVR ++ S      + +R   C D K V    V+    +  P  V     +R   G    +  ++    F +A    V +WDESRS P+++L    DS+  V +NPVE  ILAS G+DRSI LYDVR +TPVR+++L+M++N ++                       RKL D  A  VH DH  AVM VDFSPTG+EFV+ SYDKTIRIF +  GRSR+VY         XXXXXXXXXXXXXXXXXXXXX   ++ SRP+KPL   E+E +D   KL +R+  + E+R+I + RHVP  ++++   K I+KKS +RKEKN+R          +   RKK++VRELE
Sbjct:    1 MKVRVLSRSSLEYTGALDGAGSVPRRPRNPDPALHPFERAVEEKRALNAVKLERVFAKPFVGVLGDGHLDGAYALARSRRFVSRMVSGSADGEIAVWNLMRREADVTIK-AHRGFVRGLAVSTTVLEDEGERYFSCGDDKTVKIWSVAGVRDSGKPTAV-----FRGT-GVFYDVDTHWKDRIFCSAGQDGVDIWDESRSEPVENLKWGPDSVTKVVFNPVEKDILASCGADRSIALYDVRLQTPVRKVILRMKSNSLAWNPMEAFNFVIANEDGNLYSYDMRKLKD--ATCVHTDHVMAVMDVDFSPTGREFVSASYDKTIRIFKFNGGRSRDVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQASRPIKPLLPREKESLDYNQKLKQRFHDVPEIRRIQRHRHVPKVIKNLAKEKEIVKKSRQRKEKNLRAHSTPGTVPVRPT-RKKHVVRELE 452          
BLAST of Ggra7905.t1 vs. uniprot
Match: L8HJP4 (Sof1 domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJP4_ACACA)

HSP 1 Score: 270 bits (690), Expect = 2.740e-82
Identity = 160/461 (34.71%), Postives = 253/461 (54.88%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADG--------EMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSAEYAAN--PDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIV 451
            M+++ +SR++AE++   +   +  R   N  P  H  + P +  R++ A K+++I ARPF+ A +  H D V+ L R   ++  + S + DG        E+++W+L +H A  A  P  R FVR ++  H +  ++   D K +    +S +   N  P+ +  L  +       + I    NQP FAT+  V+ LWDE+R +P  +     DS++ V++NP++  +LAS  SDRS+  +DVRA TP+R++++ MR N ++                       R+L    AL+VH+DH AAV+ +D+SPTG+EFVTGSYD+T+RIF  + GRSREVYHTKRMQR+F                     +WK+  + PLK L   E++K++  +KL  RY+ L E+R+I + RH+P  V      K++MKK+ +RKEKN  R        + V ERK++IV
Sbjct:    1 MKVKTISRNEAEFT--RERKVDLVRMQRNVDPAQHPFEKPREYTRALNAVKMDKIFARPFVAALN-GHSDSVFSLCRHPDSLTHIFSGSCDGVVVVMGVPELKVWNLATH-ACLATLPAHRGFVRGVALGHGNSSVITVGDDKAIKLWPISLDGLRNGLPEDIQPLTTFLGEHA-FSGISHKANQPIFATSGPVILLWDETRGSPTATFEWGCDSVNAVKFNPIDQDVLASLASDRSLAFHDVRASTPIRKVIMTMRGNAVAWNPMEAFNLSVASEDHNVYTFDMRRLDT--ALNVHQDHVAAVLDIDYSPTGEEFVTGSYDRTLRIFRRSEGRSREVYHTKRMQRIFCVRFTGDSRFVMSASDDTNIRLWKANAADPLKVLVPREKKKMEYQEKLKARYRHLPEIRRIDRHRHLPKAVHGATRLKSVMKKAEQRKEKN--RAAHSSQDTRPVPERKRHIV 452          
BLAST of Ggra7905.t1 vs. uniprot
Match: T2M4Q5 (DDB1-and CUL4-associated factor 13 (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M4Q5_HYDVU)

HSP 1 Score: 265 bits (678), Expect = 1.540e-80
Identity = 169/452 (37.39%), Postives = 242/452 (53.54%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRA-RFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSAEYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIV 451
            M+++VLSR+  ++     GTT+   R   N  P LH  +   +  R++ AAKL R+ A+PFL A    H DGV CLAR+   V+ +AS A DG+++ WHL + R+          FVR I+FS   Q++    D K +    V      + +++  L  Y  ++  +  IH +     FAT    V++WDE+RS P+Q+ S  VD++H V++NP+ET ++A+  SDRSI LYD R  + +R++++KMR+N I+                       RKL     ++VH DH  AV+ +D+SPTGQEFVTGS+DKTIRIFP    RSREVYHT RMQRVF                     +WKS  S  L P    +R  +  + KL  +YQ   EV++I K RHVP  +      K IM  S +RKE+N+R           + ERKK+IV
Sbjct:    3 MKVKVLSRNPEDYIR---GTTSEINRLPRNLDPDLHPFEAAREYTRALNAAKLERVFAKPFL-ASLDGHSDGVNCLARNPVKVSSVASGACDGQIKFWHLQT-RSCLKTVTAHSGFVRGITFSPSGQKLFSVGDDKTIKQWDVD-----HNEMIEPLSTYL-HSKMMTGIHHHGKNATFATCGEAVEIWDENRSIPVQTYSWGVDTVHSVKFNPIETHLVAATASDRSIMLYDTRGTSALRKVIMKMRSNTIAWNPMEAFIFSAANEDSNAYTFDIRKLDS--PVNVHIDHVGAVLDIDYSPTGQEFVTGSFDKTIRIFPRDRARSREVYHTSRMQRVFCVTFSGDATYVLSGSDETNIRLWKSHASEKLGPTNPRQRRDLKYSSKLKNQYQHHPEVKRILKHRHVPKLIHKEAKEKRIMLDSIKRKEENMR-LHSKPGSMPVIPERKKHIV 440          
BLAST of Ggra7905.t1 vs. uniprot
Match: A0A058ZG10 (DDB1- and CUL4-associated factor 13 n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZG10_FONAL)

HSP 1 Score: 261 bits (668), Expect = 4.250e-79
Identity = 177/453 (39.07%), Postives = 263/453 (58.06%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSAEYA--ANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIV 451
            M++R+LSR  A+ +     + +  R   N  P+LH      +  R++ A KL R+ A+PF+ A    H+DGVYC+AR   +++ + S + DGE+R+W+L + +  ++     + FVR +  ++D + IL C D K +       +    A      +   +  + G   SI  + +   FAT +S VQ+W+  RSNP+ +LS   DSLHCVR+NP ET +LASAGSDR I LYD+R K+P+ +L L M+TN I+                       R +S   AL++ KDH +AVM +D+SPTG+E VTGSYD +IR+F    G SR++YHT+RMQR+F     XXXXXXXXXXXXXXXX   +  +  L P+ + ER  ++ AD L  R++ + EVR+IA+ RH+P  + +   TK  MK++ +RKE N+R         ++  ERKKNIV
Sbjct:    1 MKIRMLSRDAAQTT--RPRSNDLPRLPRNLDPELHPFSQAREYTRALNATKLERVFAKPFVAALD-GHRDGVYCMARHPNHLSAMISGSGDGELRVWNLINQKTVWSHT-AHKGFVRGVCVANDGRSILSCGDDKAIRMWNFDYDNKNWATAVTEEAESVWLDDEG-FTSIDYHRSDQLFATCNSSVQIWNYERSNPLFNLSWGADSLHCVRFNPTETHVLASAGSDRMIMLYDIRTKSPLTKLTLAMKTNAIAWNPMQAFNFTAANEDHNCYTFDMRNMSS--ALNILKDHVSAVMDIDYSPTGKEIVTGSYDCSIRLFRANEGHSRDIYHTRRMQRIFCVRFSXXXXXXXXXXXXXXXXXXXARAAEKLGPVSSRERAALNYADTLRGRFKHMPEVRRIARHRHIPKAIHTAARTKREMKEAIQRKEDNMRENSRSGSIPREA-ERKKNIV 445          
BLAST of Ggra7905.t1 vs. uniprot
Match: D7FIH9 (Sof1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIH9_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 1.580e-78
Identity = 165/456 (36.18%), Postives = 238/456 (52.19%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQ--VSAEYAANPDLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVREL 454
            M+++ +SR +  ++   D   +R +   N  P LH  +   +  R++ + KL+++ A+P + A    H DGV+C A SRRN+    S A DGE+RLW L S R+    A   + FVR +S + D    L   D  +V   +  V+++ +  P+   +   +   +G   S+  ++    FATA   V LWD SR+ P  S     DS +CVR+NP E  +LAS GS R + LYD RA  P+R++VL+MR+N ++                       R L+   AL +HKDH +AVM V FSPTGQEF +GSYD+T+R+FP+  GRSREVYHTKRMQRVF                     +WK+  S  L  +   E  K +  D L +RY+ + EVR+IAK RHVP  V+     + + +    RK  N R         + V ERKK IV+EL
Sbjct:    1 MKVKTISRVEESYT--RDCKGDRLQVHRNRDPSLHPFEKAREYTRALQSVKLDKMFAKPLVGALD-GHGDGVFCSASSRRNLVQFLSGACDGEIRLWDL-SRRSCVWRAVGHQGFVRGLSVTPDGASFLSAGDDGMVKQWELGVASDLSETPEPTAT---WMGKSGGFKSLDHHWTDAKFATAGDSVDLWDHSRAEPTLSYQWGADSNNCVRFNPAERCLLASTGSSREVCLYDTRATVPMRKVVLQMRSNAVAWNPQEPMNFVCANEDTNLYTFDLRNLNQ--ALMIHKDHVSAVMDVSFSPTGQEFASGSYDRTVRVFPHRAGRSREVYHTKRMQRVFCVNFSADARFVMTGSDDTNLRIWKANASEKLGKVVPREARKQEYRDSLKKRYEHMPEVRRIAKHRHVPRIVKKAAEAERVQRDKERRKVDN-RIKHSKAGTVETVPERKKKIVKEL 446          
BLAST of Ggra7905.t1 vs. uniprot
Match: A0A5J4Z6E1 (DDB1-and CUL4-associated factor 13 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6E1_PORPP)

HSP 1 Score: 261 bits (666), Expect = 4.440e-78
Identity = 181/515 (35.15%), Postives = 252/515 (48.93%), Query Frame = 0
Query:    1 MRLRVLSRSDAEWSGRNDGTTNRA----RFSSNPKPQLHAPQHPLDVQRSITAAKLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLPSHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSAEYAANPDLVHSLHQYRS----------------NAG-----------------------------------PLASIHANYNQP-WFATASSVVQLWDESRSNPIQSLSSSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTNDISXXXXXXXXXXXXXXXXXXXXXXXRKLSDRGALSVHKDHAAAVMSVDFSPTGQEFVTGSYDKTIRIFPYTTG----RSREVYHTKRMQRVFXXXXXXXXXXXXXXXXXXXXXVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIAKKRHVPAHVRSMQITKAIMKKSAERKEKNVRRXXXXXXXXKKVQERKKNIVRELE 455
            M+++VLSRS+ EW+G  DG  + +    R   N  P+LH  +  ++ +R++ AAKL R+ A+PFL A S  H D  Y + RSR + A   S AADG + +W+L +   R+       AF R + F+      L C D + V    V      +   +   + YRS                +AG                                   PL+S+ A++  P  F T+S  V+LWD  RS PIQ LS   D++H VR+NPVE ++LAS G+DRSI +YDVR KTPVR+LVL MR+N ++                       RKLS   A  +H DH  AVM +D+SPTG E VTGSYD+T+R+F         RSRE Y+T+RMQRVF                     +WK+  S P K     ER+ +D A+KL +R+Q +  VR+I K + +P  +  MQ  K +MK SA RK  N+            V ++  NIVRELE
Sbjct:    1 MKVKVLSRSEIEWTGELDGRGSSSAAPRRQQYNYDPKLHPMERAVEQKRALNAAKLERVFAKPFLAALSV-HVDSPYAVKRSRVSTAHALSCAADGAVAVWNLVTKEPRWIHHSAHEAFARDVVFTAIPSMFLSCADDRTVKLWDVDLTERRDEQNMLDDYDYRSRIPGAAVRKNGDMAGSSAGESFLSPRLHTPLGQAEGGLKHRNRMVPSHVFMASMPLSSVDAHWRDPSLFVTSSDAVELWDVGRSKPIQRLSWGADAVHKVRYNPVEQNLLASLGADRSIVIYDVRLKTPVRKLVLSMRSNAVAWNPIEAFNFSVANEDHNVYTYDMRKLSR--AKGIHTDHVRAVMDLDYSPTGTEIVTGSYDQTVRLFDLRDEQFGRRSREAYYTRRMQRVFGVNFSADAQMVMSASDDGDIRLWKAHASIPTKAQLPRERDAIDYAEKLKKRFQHVPSVRRILKNKFLPRPIHRMQNMKKVMKDSARRKNLNLAAHSKPGAIPH-VPDKMTNIVRELE 511          
The following BLAST results are available for this feature:
BLAST of Ggra7905.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5381.410e-22075.38Protein sof1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A1X6NTY85.830e-11845.51Sof1 domain-containing protein n=1 Tax=Porphyra um... [more]
M2X7R71.390e-8743.45U3 snoRNP component Sof1p n=1 Tax=Galdieria sulphu... [more]
L1JPF43.560e-8436.15DDB1- and CUL4-associated factor 13 n=1 Tax=Guilla... [more]
A0A7S1TBL62.450e-8241.99DDB1- and CUL4-associated factor 13 n=2 Tax=Compso... [more]
L8HJP42.740e-8234.71Sof1 domain-containing protein n=1 Tax=Acanthamoeb... [more]
T2M4Q51.540e-8037.39DDB1-and CUL4-associated factor 13 (Fragment) n=1 ... [more]
A0A058ZG104.250e-7939.07DDB1- and CUL4-associated factor 13 n=1 Tax=Fontic... [more]
D7FIH91.580e-7836.18Sof1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A5J4Z6E14.440e-7835.15DDB1-and CUL4-associated factor 13 n=1 Tax=Porphyr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 58..98
e-value: 0.49
score: 19.0
coord: 280..319
e-value: 4.8E-6
score: 36.1
coord: 101..141
e-value: 430.0
score: 0.4
coord: 235..274
e-value: 60.0
score: 5.8
coord: 149..189
e-value: 30.0
score: 7.7
coord: 321..362
e-value: 0.0011
score: 28.3
coord: 192..232
e-value: 9.8E-5
score: 31.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 287..318
e-value: 1.5E-4
score: 22.5
coord: 337..362
e-value: 9.5E-4
score: 19.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 65..107
score: 9.104886
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 330..371
score: 11.64467
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 199..241
score: 8.637032
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 287..328
score: 12.246197
IPR007287Sof1-like proteinPFAMPF04158Sof1coord: 367..450
e-value: 6.7E-15
score: 55.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 242..384
e-value: 2.1E-25
score: 91.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..241
e-value: 1.2E-22
score: 82.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..455
NoneNo IPR availablePANTHERPTHR22851:SF0DDB1- AND CUL4-ASSOCIATED FACTOR 13coord: 1..453
NoneNo IPR availablePANTHERPTHR22851U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINcoord: 1..453
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 287..318
score: 9.572873
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 330..362
score: 9.335602
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 64..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:404960..406327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7905.t1Ggra7905.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 404960..406327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7905.t1 ID=Ggra7905.t1|Name=Ggra7905.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=456bp
MRLRVLSRSDAEWSGRNDGTTNRARFSSNPKPQLHAPQHPLDVQRSITAA
KLNRILARPFLFACSPSHQDGVYCLARSRRNVALLASAAADGEMRLWHLP
SHRARFALAPTPRAFVRAISFSHDSQRILFCTDAKLVHCAQVSAEYAANP
DLVHSLHQYRSNAGPLASIHANYNQPWFATASSVVQLWDESRSNPIQSLS
SSVDSLHCVRWNPVETSILASAGSDRSITLYDVRAKTPVRRLVLKMRTND
ISWNPIEAMNFVTANDDHNCYAYDLRKLSDRGALSVHKDHAAAVMSVDFS
PTGQEFVTGSYDKTIRIFPYTTGRSREVYHTKRMQRVFAVSFSLDGSYVI
SGSDDADVRVWKSERSRPLKPLFAAEREKVDAADKLIRRYQSLSEVRKIA
KKRHVPAHVRSMQITKAIMKKSAERKEKNVRRNTRPEKRPKKVQERKKNI
VRELE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR007287Sof1
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf