Ggra5198.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra5198.t1
Unique NameGgra5198.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length392
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:736895..738070 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5198Ggra5198Gracilaria gracilis GNS1m malegenetig00000069_pilon 736895..738070 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5198.t1.stop1Ggra5198.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000069_pilon 736895..736897 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5198.t1.CDS1Ggra5198.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000069_pilon 736895..738070 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5198.t1.exon1Ggra5198.t1.exon1Gracilaria gracilis GNS1m maleexontig00000069_pilon 736895..738070 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5198.t1.start1Ggra5198.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000069_pilon 738068..738070 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra5198.t1Ggra5198.t1Gracilaria gracilis GNS1m malepolypeptidetig00000069_pilon 736895..738070 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra5198.t1 ID=Ggra5198.t1|Name=Ggra5198.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=392bp
MWEGRNLPENASSSASEDSIKAPPPFDPSRVKPGPGALPPDTFDPLKQKP
DEWEPFWKLVDEYFLPINLDDVRFLRSIPVNPYGGLHDANLRFPLLSNSI
KAPPSERIRDAKDHRRTSSSSTDVDRQNGKTSSTQLKSQDANLLARSHQS
SDVHSISKPLTDVDPESLKSTLNSFPYTQRLIAALLDENPSGTPHPCTPS
ARNSRTTHLMEDSFYLGHGSDADVRSFQGAMETRVKLELVENGLLDDPLE
SELDSTLRHEQWRLRDLKVINRMRKTSLFTRIIGIELRHQAFKREVKRHD
DHVEIAYLEKMIGNMKKNKKSRSKYQKMMQKMFGRYKEHDKISKSKKGSD
TISNGRVSSGGEERRIAAKKKKRKSEPHPSISTKAAKRGSH*
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spliced messenger RNA

>Ggra5198.t1 ID=Ggra5198.t1|Name=Ggra5198.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1176bp|location=Sequence derived from alignment at tig00000069_pilon:736895..738070- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGGAGGGGCGCAATCTCCCAGAAAATGCATCCTCCTCCGCCTCGGA
AGATTCCATCAAAGCGCCTCCCCCTTTTGATCCTTCTCGAGTCAAACCGG
GTCCTGGCGCGCTGCCCCCGGATACATTTGATCCCCTCAAGCAAAAACCC
GATGAATGGGAGCCCTTCTGGAAACTCGTCGATGAGTACTTTCTGCCCAT
CAACTTGGACGATGTTCGCTTTCTGCGCTCCATACCCGTAAATCCATACG
GAGGTCTGCATGATGCAAATTTGCGTTTCCCTTTATTGTCTAATTCTATA
AAAGCACCCCCTTCTGAACGAATCAGGGATGCAAAAGACCACAGAAGAAC
TTCCTCATCCTCAACCGATGTAGACAGGCAAAATGGAAAAACAAGCTCTA
CGCAACTCAAGTCTCAAGATGCAAATCTTCTTGCGCGATCCCATCAGTCT
TCTGATGTACACTCAATCTCCAAACCACTAACAGACGTTGATCCTGAATC
TCTAAAGTCCACTCTCAATTCTTTTCCGTACACCCAACGTTTAATTGCAG
CTTTGCTCGATGAGAACCCATCCGGAACTCCACATCCTTGTACTCCCTCT
GCCCGCAACTCCCGTACTACTCACTTAATGGAAGACTCTTTTTACCTGGG
GCATGGCTCTGACGCAGACGTCCGTTCTTTTCAAGGCGCTATGGAAACAC
GTGTCAAGCTTGAGCTTGTCGAAAATGGCTTGCTTGATGACCCTCTAGAG
TCTGAACTTGACTCAACACTTCGTCACGAGCAATGGAGATTGCGAGACCT
CAAGGTGATTAATCGTATGCGGAAAACGTCCTTGTTCACCAGGATTATTG
GTATAGAATTGCGCCATCAAGCTTTTAAACGCGAGGTGAAACGACACGAT
GATCACGTAGAGATCGCATATCTGGAAAAGATGATTGGCAATATGAAGAA
AAACAAGAAATCACGCTCAAAGTATCAGAAGATGATGCAAAAAATGTTTG
GCCGGTACAAGGAGCATGACAAAATTAGCAAGTCAAAGAAGGGATCAGAC
ACCATTTCAAATGGACGAGTGAGTTCCGGAGGCGAGGAGCGACGTATAGC
GGCGAAGAAAAAGAAGAGAAAGTCTGAACCACACCCTAGCATCAGCACTA
AGGCCGCAAAACGTGGATCCCATTAA
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protein sequence of Ggra5198.t1

>Ggra5198.t1 ID=Ggra5198.t1|Name=Ggra5198.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=392bp
MWEGRNLPENASSSASEDSIKAPPPFDPSRVKPGPGALPPDTFDPLKQKP
DEWEPFWKLVDEYFLPINLDDVRFLRSIPVNPYGGLHDANLRFPLLSNSI
KAPPSERIRDAKDHRRTSSSSTDVDRQNGKTSSTQLKSQDANLLARSHQS
SDVHSISKPLTDVDPESLKSTLNSFPYTQRLIAALLDENPSGTPHPCTPS
ARNSRTTHLMEDSFYLGHGSDADVRSFQGAMETRVKLELVENGLLDDPLE
SELDSTLRHEQWRLRDLKVINRMRKTSLFTRIIGIELRHQAFKREVKRHD
DHVEIAYLEKMIGNMKKNKKSRSKYQKMMQKMFGRYKEHDKISKSKKGSD
TISNGRVSSGGEERRIAAKKKKRKSEPHPSISTKAAKRGSH*
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mRNA from alignment at tig00000069_pilon:736895..738070-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra5198.t1 ID=Ggra5198.t1|Name=Ggra5198.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1176bp|location=Sequence derived from alignment at tig00000069_pilon:736895..738070- (Gracilaria gracilis GNS1m male)
ATGTGGGAGGGGCGCAATCTCCCAGAAAATGCATCCTCCTCCGCCTCGGA
AGATTCCATCAAAGCGCCTCCCCCTTTTGATCCTTCTCGAGTCAAACCGG
GTCCTGGCGCGCTGCCCCCGGATACATTTGATCCCCTCAAGCAAAAACCC
GATGAATGGGAGCCCTTCTGGAAACTCGTCGATGAGTACTTTCTGCCCAT
CAACTTGGACGATGTTCGCTTTCTGCGCTCCATACCCGTAAATCCATACG
GAGGTCTGCATGATGCAAATTTGCGTTTCCCTTTATTGTCTAATTCTATA
AAAGCACCCCCTTCTGAACGAATCAGGGATGCAAAAGACCACAGAAGAAC
TTCCTCATCCTCAACCGATGTAGACAGGCAAAATGGAAAAACAAGCTCTA
CGCAACTCAAGTCTCAAGATGCAAATCTTCTTGCGCGATCCCATCAGTCT
TCTGATGTACACTCAATCTCCAAACCACTAACAGACGTTGATCCTGAATC
TCTAAAGTCCACTCTCAATTCTTTTCCGTACACCCAACGTTTAATTGCAG
CTTTGCTCGATGAGAACCCATCCGGAACTCCACATCCTTGTACTCCCTCT
GCCCGCAACTCCCGTACTACTCACTTAATGGAAGACTCTTTTTACCTGGG
GCATGGCTCTGACGCAGACGTCCGTTCTTTTCAAGGCGCTATGGAAACAC
GTGTCAAGCTTGAGCTTGTCGAAAATGGCTTGCTTGATGACCCTCTAGAG
TCTGAACTTGACTCAACACTTCGTCACGAGCAATGGAGATTGCGAGACCT
CAAGGTGATTAATCGTATGCGGAAAACGTCCTTGTTCACCAGGATTATTG
GTATAGAATTGCGCCATCAAGCTTTTAAACGCGAGGTGAAACGACACGAT
GATCACGTAGAGATCGCATATCTGGAAAAGATGATTGGCAATATGAAGAA
AAACAAGAAATCACGCTCAAAGTATCAGAAGATGATGCAAAAAATGTTTG
GCCGGTACAAGGAGCATGACAAAATTAGCAAGTCAAAGAAGGGATCAGAC
ACCATTTCAAATGGACGAGTGAGTTCCGGAGGCGAGGAGCGACGTATAGC
GGCGAAGAAAAAGAAGAGAAAGTCTGAACCACACCCTAGCATCAGCACTA
AGGCCGCAAAACGTGGATCCCATTAA
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Coding sequence (CDS) from alignment at tig00000069_pilon:736895..738070-

>Ggra5198.t1 ID=Ggra5198.t1|Name=Ggra5198.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1176bp|location=Sequence derived from alignment at tig00000069_pilon:736895..738070- (Gracilaria gracilis GNS1m male)
ATGTGGGAGGGGCGCAATCTCCCAGAAAATGCATCCTCCTCCGCCTCGGA
AGATTCCATCAAAGCGCCTCCCCCTTTTGATCCTTCTCGAGTCAAACCGG
GTCCTGGCGCGCTGCCCCCGGATACATTTGATCCCCTCAAGCAAAAACCC
GATGAATGGGAGCCCTTCTGGAAACTCGTCGATGAGTACTTTCTGCCCAT
CAACTTGGACGATGTTCGCTTTCTGCGCTCCATACCCGTAAATCCATACG
GAGGTCTGCATGATGCAAATTTGCGTTTCCCTTTATTGTCTAATTCTATA
AAAGCACCCCCTTCTGAACGAATCAGGGATGCAAAAGACCACAGAAGAAC
TTCCTCATCCTCAACCGATGTAGACAGGCAAAATGGAAAAACAAGCTCTA
CGCAACTCAAGTCTCAAGATGCAAATCTTCTTGCGCGATCCCATCAGTCT
TCTGATGTACACTCAATCTCCAAACCACTAACAGACGTTGATCCTGAATC
TCTAAAGTCCACTCTCAATTCTTTTCCGTACACCCAACGTTTAATTGCAG
CTTTGCTCGATGAGAACCCATCCGGAACTCCACATCCTTGTACTCCCTCT
GCCCGCAACTCCCGTACTACTCACTTAATGGAAGACTCTTTTTACCTGGG
GCATGGCTCTGACGCAGACGTCCGTTCTTTTCAAGGCGCTATGGAAACAC
GTGTCAAGCTTGAGCTTGTCGAAAATGGCTTGCTTGATGACCCTCTAGAG
TCTGAACTTGACTCAACACTTCGTCACGAGCAATGGAGATTGCGAGACCT
CAAGGTGATTAATCGTATGCGGAAAACGTCCTTGTTCACCAGGATTATTG
GTATAGAATTGCGCCATCAAGCTTTTAAACGCGAGGTGAAACGACACGAT
GATCACGTAGAGATCGCATATCTGGAAAAGATGATTGGCAATATGAAGAA
AAACAAGAAATCACGCTCAAAGTATCAGAAGATGATGCAAAAAATGTTTG
GCCGGTACAAGGAGCATGACAAAATTAGCAAGTCAAAGAAGGGATCAGAC
ACCATTTCAAATGGACGAGTGAGTTCCGGAGGCGAGGAGCGACGTATAGC
GGCGAAGAAAAAGAAGAGAAAGTCTGAACCACACCCTAGCATCAGCACTA
AGGCCGCAAAACGTGGATCCCATTAA
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