Ggra5059.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5059.t1
Unique NameGgra5059.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length149
Homology
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BLAST of Ggra5059.t1 vs. uniprot
Match: A0A2V3J762 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J762_9FLOR)

HSP 1 Score: 135 bits (340), Expect = 4.910e-38
Identity = 75/118 (63.56%), Postives = 89/118 (75.42%), Query Frame = 0 
Query:    1 MASQTDRKEEFRKYLDKGNVLSILTNVLTDLFELEPKPEDPALYLYQKIGEVVNKDKTAPTANH-TDTPQKDVEMKETAQTTAPQPTKPAETETKQQQKPAQESVETKPAPPEQTDPP 117
            M+SQTD+KEEFRKYLDKGNVLSILT VLTDLFELEPKP+DPALYLYQK GE ++KD   P      + PQKD+EM E  QT +  P+KPAE E       AQ++ E+KP+ PEQ+DPP
Sbjct:    1 MSSQTDKKEEFRKYLDKGNVLSILTTVLTDLFELEPKPQDPALYLYQKFGEALSKDSKPPAQTAPAEAPQKDIEMNEAPQTISALPSKPAEPEPAXXXXXAQKTTESKPSAPEQSDPP 118
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BLAST of Ggra5059.t1 vs. uniprot
Match: A0A1X6NMW7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMW7_PORUM)

HSP 1 Score: 57.4 bits (137), Expect = 6.640e-8
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:    6 DRKEEFRKYLDKGNVLSILTNVLTDLFELEPKPEDPALYLYQKIGE 51
            DRK+ FR+YL+   VL ILTN LTDLFE++ +PEDP  +L  ++ E
Sbjct:    8 DRKDAFRRYLESHRVLDILTNSLTDLFEMDVRPEDPITFLASRLTE 53
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BLAST of Ggra5059.t1 vs. uniprot
Match: A0A7S1PJB3 (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PJB3_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 3.180e-6
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:    3 SQTDRKEEFRKYLDKGNVLSILTNVLTDLFELEPKPEDPALYLYQKIG 50
            S + RKEEFRKYL+   V+  +T V   L+E E +PEDP  Y+ Q +G
Sbjct:   11 SISQRKEEFRKYLESNGVVDAITKVFVGLYEQEARPEDPLQYIRQNLG 58
The following BLAST results are available for this feature:
BLAST of Ggra5059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J7624.910e-3863.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NMW76.640e-854.35Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1PJB33.180e-647.92Hypothetical protein n=1 Tax=Percolomonas cosmopol... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR02028CMYCBINDINGPcoord: 5..15
score: 54.81
coord: 29..43
score: 31.69
coord: 15..29
score: 42.61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:362414..363057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5059.t1Ggra5059.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 362414..363057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5059.t1 ID=Ggra5059.t1|Name=Ggra5059.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=149bp
MASQTDRKEEFRKYLDKGNVLSILTNVLTDLFELEPKPEDPALYLYQKIG
EVVNKDKTAPTANHTDTPQKDVEMKETAQTTAPQPTKPAETETKQQQKPA
QESVETKPAPPEQTDPPSQQPTQPEPASSAAAPAAAPAAPLSVPATTQ*
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