Ggra5942.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5942.t1
Unique NameGgra5942.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length297
Homology
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BLAST of Ggra5942.t1 vs. uniprot
Match: R7QG85 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG85_CHOCR)

HSP 1 Score: 186 bits (471), Expect = 7.800e-54
Identity = 103/253 (40.71%), Postives = 148/253 (58.50%), Query Frame = 0 
Query:   20 MPGWRPRDVNDFLQSRCSGSRAIWQLEGQLIALNTGRVLARVVGVQETLLDKPLKKVTTLAPKS--LRLSKNDTSK-RSHEPLTHSGRLVVRDTIFYTD--PDGIKMTQFRFRPTSVARRVSPVLGKAGRVTIGRSTDESMVLSRNR-DESQLFTTITTPPLRMNGLLKTGWSFIGRRVKGMN-GVSNPGVVEKFELLAGRNAASWNWSGVGRCPSWYGRGQCVMFLNAKRVRPS--DLDNRVKLWMKEAGRS 263
            MPGWRP DV D + +R SG   +W+  G LIAL  GR LA V G++E LL+K  +  T    K   + L+ +   + R+   LTH+  L+VR ++FYT       KM +FR+RPT+ ARRV  +L    RV + R     +VL+R R     + T I T P R+   L   W+++GRR    N G++ P VVE+ +    +   +W W+ VGRCP+WYGRGQCV +L+A+R+     D+D+RVK WM+  GR+
Sbjct:    1 MPGWRPEDVRDLVSAR-SGGGGVWECSGTLIALGNGRELAHVEGIEEVLLEKRFQNTTDAESKQSVIHLTSSTGGRLRAPNALTHAATLLVRSSLFYTGLVAPHKKMNEFRYRPTTPARRVDAILSPPARVVVARDDAGGLVLTRKRAGHPDVATVIDTAPRRVRRQLAAAWTYVGRRAAQKNTGLTTPAVVERCDYTVTKEGGTWAWTRVGRCPAWYGRGQCVTYLSARRLDGGWRDVDDRVKEWMRVEGRT 252
The following BLAST results are available for this feature:
BLAST of Ggra5942.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QG857.800e-5440.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:622911..623801 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5942.t1Ggra5942.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 622911..623801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5942.t1 ID=Ggra5942.t1|Name=Ggra5942.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=297bp
MPHGVGFSGSTAVVPSSRRMPGWRPRDVNDFLQSRCSGSRAIWQLEGQLI
ALNTGRVLARVVGVQETLLDKPLKKVTTLAPKSLRLSKNDTSKRSHEPLT
HSGRLVVRDTIFYTDPDGIKMTQFRFRPTSVARRVSPVLGKAGRVTIGRS
TDESMVLSRNRDESQLFTTITTPPLRMNGLLKTGWSFIGRRVKGMNGVSN
PGVVEKFELLAGRNAASWNWSGVGRCPSWYGRGQCVMFLNAKRVRPSDLD
NRVKLWMKEAGRSELRVVDADEAEREAKLEREAEEKKKKRKVFGFF*
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