Ggra5868.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5868.t1
Unique NameGgra5868.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
BLAST of Ggra5868.t1 vs. uniprot
Match: A0A2V3ILX8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX8_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 3.300e-30
Identity = 66/140 (47.14%), Postives = 96/140 (68.57%), Query Frame = 0
Query:  104 MVLYRNRNKVKVEGEERLPAAIRFLAAVRLLTTCPKYSSNIGGNSRTAPGYRSTVTNIAAGDNEGGTAEQSTRTGTIAMDSPPTSRPSGAKKQKLEKVLERNISKMSRSVDSMTETLRGSAACKKKTPSIALQLKILHRI 243
            M LYRN NK K+ GE R P  IRF++AV LL+ CPK+S+ IGG+S++A GY+           E   A  ++   +++M +P ++RP G KK+K E+V ERN+ K+++S+D++TE++R SA  KK   SIALQLKILHR+
Sbjct:    1 MTLYRNNNKFKLRGELRTPGVIRFMSAVSLLSECPKFSATIGGSSQSAHGYKPKSPKTIEKQQEQSAA--ASNFASVSMSAPASNRPFGTKKRKAEEVFERNLCKVAKSMDAITESIRCSATNKKMAASIALQLKILHRM 138          
BLAST of Ggra5868.t1 vs. uniprot
Match: A0A1X6P588 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P588_PORUM)

HSP 1 Score: 98.2 bits (243), Expect = 7.380e-21
Identity = 52/119 (43.70%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   38 NADSFWKNVFKVFKTQPEYCRTRTAIRLSSRWTTVSQIAQKYLAADKLYRSAVPSGENVEQTMQNIMVLYRNRNKVKVEGEERLPAAIRF-LAAVRLLTTCPKYSSNIGGNSRTAPGYR 155
            N   FW+     FKTQPE  R R   RL SRW+ + +I QKY++ADK YRS+VP+GE  E T+ ++M LY   N+V  +  E++ A + + + A  LL+ CPK S  IG  S T   YR
Sbjct:    2 NITVFWEKTADTFKTQPEVFRARLVARLRSRWSVIRRIVQKYVSADKQYRSSVPTGEVEEDTVASVMKLYYGTNRVAKKSGEKVDAPVFWSVEAALLLSDCPKLSPKIGEPSSTNLEYR 120          
BLAST of Ggra5868.t1 vs. uniprot
Match: A0A180FWW8 (Myb_DNA-bind_5 domain-containing protein (Fragment) n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A180FWW8_PUCT1)

HSP 1 Score: 62.0 bits (149), Expect = 2.120e-8
Identity = 39/107 (36.45%), Postives = 50/107 (46.73%), Query Frame = 0
Query:    2 TDTVPEAST-----RGPNFSPEEDLALGRSWICVSQTV---QEQNADSFWKNVFKVFKTQPEYCRTRTAIRLSSRWTTVSQIAQKYLAADKLYRSAVPSGENVEQTM 100
            T   P AST     RGPNF+PEED  L +SW+ +S+       Q  D FW+ VF  F T+      R A  L +RW  + Q   K+ A         PSG + E  M
Sbjct:   13 TSESPPASTNPTKRRGPNFTPEEDEQLAKSWVHISEDAIKSNNQKIDKFWERVFNDF-TKFSPGPVRDAAALQTRWKNLQQACLKFSALYDRIEKHPPSGSSPEDWM 118          
BLAST of Ggra5868.t1 vs. uniprot
Match: A0A0C4EUG3 (Myb_DNA-bind_5 domain-containing protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4EUG3_PUCT1)

HSP 1 Score: 58.2 bits (139), Expect = 4.780e-7
Identity = 37/102 (36.27%), Postives = 50/102 (49.02%), Query Frame = 0
Query:    2 TDTVPEAST-----RGPNFSPEEDLALGRSWICVSQTV---QEQNADSFWKNVFKVFKTQPEYCRTRTAIRLSSRWTTVSQIAQKYLAA----DKLYRSAVP 91
            T   P AST     RGPNF+PEED  L +SW+ +S+       Q  D FW+ VF  F T+      R A  L +RW  + Q   K+ A     +  +R A+P
Sbjct:   13 TSESPPASTNPTKRRGPNFTPEEDEQLAKSWVHISEDAIKSNNQKIDKFWERVFNDF-TKFSPGPVRDAAALQTRWKNLQQACLKFSALYDRIENTHRLALP 113          
BLAST of Ggra5868.t1 vs. uniprot
Match: A0A0C4FB22 (NAM-associated domain-containing protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A0C4FB22_PUCT1)

HSP 1 Score: 60.8 bits (146), Expect = 1.200e-6
Identity = 41/115 (35.65%), Postives = 52/115 (45.22%), Query Frame = 0
Query:    2 TDTVPEASTRGPNFSPEEDLALGRSWICVSQ---TVQEQNADSFWKNV---FKVFKTQPEYCRTRTAIRLSSRWTTVSQIAQKYLAADKLYRSAVPSGENVEQTMQNIMVLYRNR 110
            T T P    RGPNF+PEED  L +SW  VSQ   T   Q A  FW  V   F  F   P+    R A  LS+RW  + Q   K+ A      +   SG + +  M N   +Y  +
Sbjct:   31 TQTDPPPKRRGPNFTPEEDEQLAKSWAVVSQDAVTSNNQKAADFWARVLDDFNQFTPGPK----RDADGLSTRWKPLQQACLKFDALYNQIANNPASGTSPDDWMLNARGMYHEQ 141          
BLAST of Ggra5868.t1 vs. uniprot
Match: A0A180GUW7 (Uncharacterized protein n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A180GUW7_PUCT1)

HSP 1 Score: 57.0 bits (136), Expect = 7.290e-6
Identity = 37/115 (32.17%), Postives = 53/115 (46.09%), Query Frame = 0
Query:    2 TDTVPEASTRGPNFSPEEDLALGRSWICVSQ---TVQEQNADSFWKNV---FKVFKTQPEYCRTRTAIRLSSRWTTVSQIAQKYLAADKLYRSAVPSGENVEQTMQNIMVLYRNR 110
            T+T P    +GPNF+P+ED  L +SW  VSQ   T   Q A +FW  V   F  F   P+    + A  LS+RW  + Q    + A      +   SG + +  M N   +Y  +
Sbjct:   38 TETDPPPKRQGPNFTPDEDEQLAKSWAVVSQDAVTSSNQKAANFWARVLDDFNQFTPGPK----QDADNLSTRWKPLQQACLNFDALYNQIANNPASGTSPDDWMLNAQGMYHKQ 148          
The following BLAST results are available for this feature:
BLAST of Ggra5868.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3ILX83.300e-3047.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P5887.380e-2143.70Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A180FWW82.120e-836.45Myb_DNA-bind_5 domain-containing protein (Fragment... [more]
A0A0C4EUG34.780e-736.27Myb_DNA-bind_5 domain-containing protein n=1 Tax=P... [more]
A0A0C4FB221.200e-635.65NAM-associated domain-containing protein n=1 Tax=P... [more]
A0A180GUW77.290e-632.17Uncharacterized protein n=1 Tax=Puccinia triticina... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..197
NoneNo IPR availablePANTHERPTHR45023FAMILY NOT NAMEDcoord: 8..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:314639..315754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5868.t1Ggra5868.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 314639..315754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5868.t1 ID=Ggra5868.t1|Name=Ggra5868.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MTDTVPEASTRGPNFSPEEDLALGRSWICVSQTVQEQNADSFWKNVFKVF
KTQPEYCRTRTAIRLSSRWTTVSQIAQKYLAADKLYRSAVPSGENVEQTM
QNIMVLYRNRNKVKVEGEERLPAAIRFLAAVRLLTTCPKYSSNIGGNSRT
APGYRSTVTNIAAGDNEGGTAEQSTRTGTIAMDSPPTSRPSGAKKQKLEK
VLERNISKMSRSVDSMTETLRGSAACKKKTPSIALQLKILHRIVDTEKVD
KAVKENQRSADTSEEQEPVLPGNTSSYHWGTPTASHASSVPNAHEAQSER
ISNITTQESDGGRGLANQNSAGGSLTGIPPADMALYEFSPLLAQRW*
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