Ggra5867.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5867.t1
Unique NameGgra5867.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Homology
BLAST of Ggra5867.t1 vs. uniprot
Match: A0A2V3IRA8 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRA8_9FLOR)

HSP 1 Score: 203 bits (516), Expect = 2.810e-60
Identity = 109/146 (74.66%), Postives = 118/146 (80.82%), Query Frame = 0
Query:   34 PETSESKKLRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDIRLIKNKNIDL-QDLLVEVQGFCMGYC 178
            P   ESK+LRWIDPEPLHEIIW PEMGMKGERGAELR+IISKAIKS IPE Q MKV QMLNDDPKLVHL GITPQKLP+LVNNNA LAT+ILLKLMSS QMPKYLDALVNMDMNLQS+DI    +  + L +D +      CM  C
Sbjct:  235 PIELESKELRWIDPEPLHEIIWDPEMGMKGERGAELRDIISKAIKSPIPEKQIMKVCQMLNDDPKLVHLCGITPQKLPELVNNNAALATEILLKLMSSNQMPKYLDALVNMDMNLQSIDIVSRLSSTVQLPKDFMHTYINNCMQSC 380          
BLAST of Ggra5867.t1 vs. uniprot
Match: R7QEI6 (CCR4-NOT transcription complex subunit 11 n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QEI6_CHOCR)

HSP 1 Score: 193 bits (490), Expect = 3.370e-57
Identity = 114/292 (39.04%), Postives = 151/292 (51.71%), Query Frame = 0
Query:    3 LYVALEDAIRSGESVAAPNISTLRHMWAARHPETS------------------------------------------------------ESKKLRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-------------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQ 191
            L+ ALE A++ G SV   N+S+LR +WA RHPE +                                                      + K+LRWIDPEPLHEI+W P+MG+ GERG+E+RE+I KA KS +PE ++ K+   L +DPKLVHL G+TPQKLPDLV NN+ LAT++LLKL+SS QMP+Y  AL NMD+ + SM +                                                  L++N  ID+QDL VE+Q FC+G+ RIREVADL+RSL+
Sbjct:   73 LWGALESALQGGASVPNRNMSSLRQLWAERHPEPAPVRLPPASATVSDPDTKYVDETSNLAKELREVVSLQDFTPSFTRIPPPFLPLDAQCKELRWIDPEPLHEILWDPDMGISGERGSEVRELIEKACKSPLPEAEQQKLLAQLEEDPKLVHLCGMTPQKLPDLVQNNSVLATELLLKLVSSQQMPQYYSALTNMDVTVHSMKVVEGLTNSVQLPTDFLNTYISHCIRSCESIPENEKYGRNHMVRFVCLFLKSLMRNNIIDVQDLFVEIQDFCIGHSRIREVADLFRSLK 364          
BLAST of Ggra5867.t1 vs. uniprot
Match: A0A5P1FG73 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FG73_ASPOF)

HSP 1 Score: 132 bits (332), Expect = 2.980e-33
Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 0
Query:   41 KLRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 193
            +L W++P+  HE++W   M     RGA LR++I+KA+KS +   Q+ +V   LN+DPKLV+  GITP+KLP+LV NN  +A ++L+KLM+ST++ +Y   LVNMDM+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:  233 ELMWLNPDNNHELLWDHGMCADTSRGAALRDLIAKALKSPLMPAQQEQVLLELNNDPKLVYHCGITPRKLPELVENNPHIAVEVLIKLMNSTEIAEYFTVLVNMDMSLHSMEVVNRLTTSVELPTEFVHMYITNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTL 432          
BLAST of Ggra5867.t1 vs. uniprot
Match: D8SCP9 (CCR4-NOT transcription complex subunit 11 (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SCP9_SELML)

HSP 1 Score: 125 bits (315), Expect = 4.230e-32
Identity = 76/229 (33.19%), Postives = 117/229 (51.09%), Query Frame = 0
Query:   15 ESVAAPNISTLRHMWAARHPETSESKK--LRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI------------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 193
            E + A  +  L   W    P     +K  L W+ P+  H+++W   M     RGA +RE+I++A+K  +   Q+ +V Q L  DPKLV+  G+TP++LP+LV NN  +A ++LLKLM+S Q  +Y +ALV+MDM+L SM++                                                 LI+N+ I++ DL +EVQ FC+ + RIRE A L+R L++L
Sbjct:   45 ELMQASTLKGLEPAWDRPIPPKFPLRKEELLWLTPDSEHDLLWHSGMCADSSRGAAVRELIARALKGALAPAQQQQVLQELESDPKLVYHCGLTPRRLPELVENNPIIAVEVLLKLMNSVQSSEYFNALVSMDMSLHSMEVVNRLTTAVQIPVEYIHAYINNCISSCENMKQDKYMQNRLVRLVCVFLTSLIRNRIINVHDLFIEVQAFCIEFSRIREAAGLFRLLKSL 273          
BLAST of Ggra5867.t1 vs. uniprot
Match: A0A7S2FYZ9 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYZ9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.490e-31
Identity = 77/206 (37.38%), Postives = 111/206 (53.88%), Query Frame = 0
Query:   35 ETSESKKLRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 193
            E S+++ L WI+P+    ++W   +     +GAE+RE++SKA K  +   Q+ +V   L  D +LV+  G+TPQKLPDLV NN  +A + LLKLMSS+Q+ +YL ALVNMDM+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:   87 EVSDAE-LMWINPDYSPHLLWETGLCQDNSKGAEVRELMSKAFKGPLIPTQQQQVLAELEADSRLVYHCGLTPQKLPDLVENNPMIAIECLLKLMSSSQLNEYLSALVNMDMSLHSMEVVNRLTTAVDLPTEFIHLYISNCISSCENIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTL 291          
BLAST of Ggra5867.t1 vs. uniprot
Match: CCR4-NOT transcription complex subunit 11 n=1 Tax=Thamnophis elegans TaxID=35005 RepID=UPI00137842EE (CCR4-NOT transcription complex subunit 11 n=1 Tax=Thamnophis elegans TaxID=35005 RepID=UPI00137842EE)

HSP 1 Score: 122 bits (306), Expect = 4.000e-31
Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 0
Query:   41 KLRWIDP-EPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 193
            +L W++P EP H I W   M +K   G E++ I++KA KS +   Q+ ++   L  DPKLV+  G+TP KLPDLV NN  +A ++LLKLM S+Q+ +Y   LVNMDM+L SM++                                                LI+NK I++QDL +EVQ FC+ + RIRE A L+R L+ L
Sbjct:   26 ELAWLNPIEPDHTIQWDKSMCVKNSAGVEIKRIMAKAFKSPLSSQQQTQLLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIREAAGLFRLLKTL 226          
BLAST of Ggra5867.t1 vs. uniprot
Match: A0A7S0BET8 (CCR4-NOT transcription complex subunit 11 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BET8_9RHOD)

HSP 1 Score: 126 bits (317), Expect = 4.250e-31
Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 0
Query:   41 KLRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI 153
            +LRW+DPE  HE+IW   M ++ +RGAELRE+ISKA++S +   Q  +V   L  DP LVH  G+TP+KLPDLV  N  +A  +LLKL+SS QMP+YL  LVNMD++L SM++
Sbjct:  224 ELRWMDPEAYHEVIWDTTMSLEPDRGAELRELISKALRSPLQPAQHRQVEVQLRSDPGLVHYCGLTPKKLPDLVEKNPHVAVMVLLKLVSSRQMPQYLSTLVNMDLSLHSMEV 336          
BLAST of Ggra5867.t1 vs. uniprot
Match: CCR4-NOT transcription complex subunit 11 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC2E5 (CCR4-NOT transcription complex subunit 11 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC2E5)

HSP 1 Score: 126 bits (316), Expect = 4.890e-31
Identity = 76/228 (33.33%), Postives = 117/228 (51.32%), Query Frame = 0
Query:   15 ESVAAPNISTLRHMWAARHPETSESKK--LRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 193
            E + A  +  L   W    P     +K  L W+ P+  H+++W   M     RGA +RE+I++A+K  +   Q+ +V Q L  DPKLV+  G+TP++LP+LV NN  +A ++LLKLM+S Q  +Y +ALV+MDM+L SM++                                                LI+N+ I++ DL +EVQ FC+ + RIRE A L+R L++L
Sbjct:  196 ELMQASTLKGLEPAWDRPIPPKFPLRKEELLWLTPDSEHDLLWHSGMCADSSRGAAVRELIARALKGALAPAQQQQVLQELESDPKLVYHCGLTPRRLPELVENNPIIAVEVLLKLMNSVQSSEYFNALVSMDMSLHSMEVVNRLTTAVQIPVEYIHAYINNCISSCENMKDKYMQNRLVRLVCVFLTSLIRNRIINVHDLFIEVQAFCIEFSRIREAAGLFRLLKSL 423          
BLAST of Ggra5867.t1 vs. uniprot
Match: A0A7S3EHT0 (CCR4-NOT transcription complex subunit 11 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EHT0_9RHOD)

HSP 1 Score: 125 bits (315), Expect = 6.620e-31
Identity = 60/113 (53.10%), Postives = 83/113 (73.45%), Query Frame = 0
Query:   41 KLRWIDPEPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI 153
            +LRW+DPE  HE+IW   M ++ +RGAELRE+ISKA++S +   Q+ +V   L  DP LVH  G+TP+KLPDLV  N  +A  +LL+L+SS QMP+YL  LVNMD++L SM++
Sbjct:  224 ELRWMDPEAFHEVIWDTTMSLEPDRGAELRELISKALRSPLQPAQQRQVEVQLRSDPGLVHCCGLTPKKLPDLVEKNPHVAVMVLLQLVSSRQMPQYLSTLVNMDLSLHSMEV 336          
BLAST of Ggra5867.t1 vs. uniprot
Match: R7UNU6 (CCR4-NOT transcription complex subunit 11 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UNU6_CAPTE)

HSP 1 Score: 122 bits (307), Expect = 1.010e-30
Identity = 73/201 (36.32%), Postives = 105/201 (52.24%), Query Frame = 0
Query:   41 KLRWIDP-EPLHEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLVHLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQSMDI-----------------------------------------------RLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL 193
            +L W++P EP H++ W P M +    GAE R ++ KA K  +   Q+ ++   L +DPKLV+  G+TP KLPDLV NN  +A ++LLKLM S Q+  Y   LVNMDM+L SM++                                                LI+NK ID++D+++EVQ FC+ + RIRE A L+R L+ L
Sbjct:   74 ELVWMNPVEPDHQVAWDPTMCINNSAGAEARRLMIKAFKGSLALNQQQQLLGELENDPKLVYHIGLTPSKLPDLVENNPLVAIEVLLKLMPSNQIADYFQVLVNMDMSLHSMEVVNRLTTAVDLPSEFIHLYISNCISTCETIKDRYMQNRLVRLVCVFLQSLIRNKIIDVKDIIIEVQAFCIEFIRIREAAGLFRLLRTL 274          
The following BLAST results are available for this feature:
BLAST of Ggra5867.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRA82.810e-6074.66CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
R7QEI63.370e-5739.04CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
A0A5P1FG732.980e-3338.00CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
D8SCP94.230e-3233.19CCR4-NOT transcription complex subunit 11 (Fragmen... [more]
A0A7S2FYZ93.490e-3137.38CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
CCR4-NOT transcription complex subunit 11 n=1 Tax=Thamnophis elegans TaxID=35005 RepID=UPI00137842EE4.000e-3137.31CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]
A0A7S0BET84.250e-3153.98CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
CCR4-NOT transcription complex subunit 11 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC2E54.890e-3133.33CCR4-NOT transcription complex subunit 11 n=2 Tax=... [more]
A0A7S3EHT06.620e-3153.10CCR4-NOT transcription complex subunit 11 (Fragmen... [more]
R7UNU61.010e-3036.32CCR4-NOT transcription complex subunit 11 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019312CCR4-NOT transcription complex subunit 11PFAMPF10155CNOT11coord: 114..153
e-value: 8.8E-7
score: 29.1
coord: 154..190
e-value: 2.1E-8
score: 34.4
IPR019312CCR4-NOT transcription complex subunit 11PANTHERPTHR15975UNCHARACTERIZEDcoord: 19..152
coord: 155..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:293089..294090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5867.t1Ggra5867.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 293089..294090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5867.t1 ID=Ggra5867.t1|Name=Ggra5867.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MALYVALEDAIRSGESVAAPNISTLRHMWAARHPETSESKKLRWIDPEPL
HEIIWGPEMGMKGERGAELREIISKAIKSLIPEGQRMKVRQMLNDDPKLV
HLSGITPQKLPDLVNNNAPLATDILLKLMSSTQMPKYLDALVNMDMNLQS
MDIRLIKNKNIDLQDLLVEVQGFCMGYCRIREVADLYRSLQAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019312CNOT11