Ggra4709.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra4709.t1
Unique NameGgra4709.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:28559..29293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4709Ggra4709Gracilaria gracilis GNS1m malegenetig00000065_pilon 28559..29293 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4709.t1.stop1Ggra4709.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000065_pilon 28559..28561 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4709.t1.CDS1Ggra4709.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000065_pilon 28559..29293 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4709.t1.exon1Ggra4709.t1.exon1Gracilaria gracilis GNS1m maleexontig00000065_pilon 28559..29293 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4709.t1.start1Ggra4709.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000065_pilon 29291..29293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra4709.t1Ggra4709.t1Gracilaria gracilis GNS1m malepolypeptidetig00000065_pilon 28559..29293 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra4709.t1 ID=Ggra4709.t1|Name=Ggra4709.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=245bp
MAGGSSNGRPGSSSGAGPSSGAGSSSGAPPSRAGPSRVNASKKTARDIRR
ERNLASAKASRQRKRESISALEQEHSRLNEVNAMLRARLNISDSDTLPAL
QQLQRLPAQKPGHTEVGPALRKLAKKSELESKVLVDLLDRALSGGQGKGP
PLDPDLCRAWETAMRRAPKDQPRPYQYVEKHGGMEILGPNARGRGTVSKG
GPLAGPRPPMPPGDGGRGSSSRAGSSKGGPSKAASSKGGPSSKR*
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spliced messenger RNA

>Ggra4709.t1 ID=Ggra4709.t1|Name=Ggra4709.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000065_pilon:28559..29293- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGGCGGAAGCAGTAACGGCCGTCCAGGTTCTTCCAGTGGTGCCGG
TCCTTCCTCCGGTGCGGGCTCGTCCAGTGGCGCCCCGCCCTCTCGTGCCG
GCCCGTCTCGTGTGAACGCATCGAAAAAGACCGCTCGTGACATCCGCCGT
GAGCGCAATCTCGCCTCAGCCAAGGCCTCCCGCCAGCGTAAACGTGAGAG
TATCTCCGCATTGGAACAGGAACACTCTCGTCTGAATGAAGTTAATGCAA
TGCTACGCGCTCGTCTCAACATCTCTGATAGTGACACATTGCCAGCTCTA
CAGCAGTTGCAGAGGTTGCCCGCTCAGAAGCCAGGCCATACTGAAGTCGG
ACCGGCGCTCAGGAAGCTGGCTAAGAAGAGCGAACTGGAATCTAAGGTTC
TGGTAGATTTGCTCGATCGCGCTCTCTCTGGCGGACAGGGCAAGGGCCCA
CCACTTGATCCGGATCTGTGCAGAGCATGGGAAACAGCCATGAGAAGGGC
GCCAAAGGATCAGCCGCGGCCGTATCAGTACGTTGAAAAGCATGGTGGCA
TGGAGATTCTTGGCCCCAACGCTAGAGGCAGGGGGACTGTTTCCAAAGGT
GGCCCGCTCGCCGGCCCGAGGCCGCCTATGCCCCCCGGTGACGGAGGTCG
AGGTTCATCTTCGAGGGCTGGTTCATCGAAGGGCGGTCCATCGAAAGCCG
CATCTTCTAAAGGTGGACCGTCAAGCAAACGCTAA
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protein sequence of Ggra4709.t1

>Ggra4709.t1 ID=Ggra4709.t1|Name=Ggra4709.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MAGGSSNGRPGSSSGAGPSSGAGSSSGAPPSRAGPSRVNASKKTARDIRR
ERNLASAKASRQRKRESISALEQEHSRLNEVNAMLRARLNISDSDTLPAL
QQLQRLPAQKPGHTEVGPALRKLAKKSELESKVLVDLLDRALSGGQGKGP
PLDPDLCRAWETAMRRAPKDQPRPYQYVEKHGGMEILGPNARGRGTVSKG
GPLAGPRPPMPPGDGGRGSSSRAGSSKGGPSKAASSKGGPSSKR*
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mRNA from alignment at tig00000065_pilon:28559..29293-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra4709.t1 ID=Ggra4709.t1|Name=Ggra4709.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000065_pilon:28559..29293- (Gracilaria gracilis GNS1m male)
ATGGCAGGCGGAAGCAGTAACGGCCGTCCAGGTTCTTCCAGTGGTGCCGG
TCCTTCCTCCGGTGCGGGCTCGTCCAGTGGCGCCCCGCCCTCTCGTGCCG
GCCCGTCTCGTGTGAACGCATCGAAAAAGACCGCTCGTGACATCCGCCGT
GAGCGCAATCTCGCCTCAGCCAAGGCCTCCCGCCAGCGTAAACGTGAGAG
TATCTCCGCATTGGAACAGGAACACTCTCGTCTGAATGAAGTTAATGCAA
TGCTACGCGCTCGTCTCAACATCTCTGATAGTGACACATTGCCAGCTCTA
CAGCAGTTGCAGAGGTTGCCCGCTCAGAAGCCAGGCCATACTGAAGTCGG
ACCGGCGCTCAGGAAGCTGGCTAAGAAGAGCGAACTGGAATCTAAGGTTC
TGGTAGATTTGCTCGATCGCGCTCTCTCTGGCGGACAGGGCAAGGGCCCA
CCACTTGATCCGGATCTGTGCAGAGCATGGGAAACAGCCATGAGAAGGGC
GCCAAAGGATCAGCCGCGGCCGTATCAGTACGTTGAAAAGCATGGTGGCA
TGGAGATTCTTGGCCCCAACGCTAGAGGCAGGGGGACTGTTTCCAAAGGT
GGCCCGCTCGCCGGCCCGAGGCCGCCTATGCCCCCCGGTGACGGAGGTCG
AGGTTCATCTTCGAGGGCTGGTTCATCGAAGGGCGGTCCATCGAAAGCCG
CATCTTCTAAAGGTGGACCGTCAAGCAAACGCTAA
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Coding sequence (CDS) from alignment at tig00000065_pilon:28559..29293-

>Ggra4709.t1 ID=Ggra4709.t1|Name=Ggra4709.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=735bp|location=Sequence derived from alignment at tig00000065_pilon:28559..29293- (Gracilaria gracilis GNS1m male)
ATGGCAGGCGGAAGCAGTAACGGCCGTCCAGGTTCTTCCAGTGGTGCCGG
TCCTTCCTCCGGTGCGGGCTCGTCCAGTGGCGCCCCGCCCTCTCGTGCCG
GCCCGTCTCGTGTGAACGCATCGAAAAAGACCGCTCGTGACATCCGCCGT
GAGCGCAATCTCGCCTCAGCCAAGGCCTCCCGCCAGCGTAAACGTGAGAG
TATCTCCGCATTGGAACAGGAACACTCTCGTCTGAATGAAGTTAATGCAA
TGCTACGCGCTCGTCTCAACATCTCTGATAGTGACACATTGCCAGCTCTA
CAGCAGTTGCAGAGGTTGCCCGCTCAGAAGCCAGGCCATACTGAAGTCGG
ACCGGCGCTCAGGAAGCTGGCTAAGAAGAGCGAACTGGAATCTAAGGTTC
TGGTAGATTTGCTCGATCGCGCTCTCTCTGGCGGACAGGGCAAGGGCCCA
CCACTTGATCCGGATCTGTGCAGAGCATGGGAAACAGCCATGAGAAGGGC
GCCAAAGGATCAGCCGCGGCCGTATCAGTACGTTGAAAAGCATGGTGGCA
TGGAGATTCTTGGCCCCAACGCTAGAGGCAGGGGGACTGTTTCCAAAGGT
GGCCCGCTCGCCGGCCCGAGGCCGCCTATGCCCCCCGGTGACGGAGGTCG
AGGTTCATCTTCGAGGGCTGGTTCATCGAAGGGCGGTCCATCGAAAGCCG
CATCTTCTAAAGGTGGACCGTCAAGCAAACGCTAA
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