Ggra4709.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4709.t1
Unique NameGgra4709.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
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BLAST of Ggra4709.t1 vs. uniprot
Match: A0A2V3J4I7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4I7_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 4.400e-94
Identity = 166/214 (77.57%), Postives = 186/214 (86.92%), Query Frame = 0 
Query:    1 MAGGSSNGRPG------SSSGAXXXXXXXXXXXXXXXRAGPSRVNASKKTARDIRRERNLASAKASRQRKRESISALEQEHSRLNEVNAMLRARLNISDSDTLPALQQLQRLPAQKPGHTEVGPALRKLAKKSELESKVLVDLLDRALSGGQGKGPPLDPDLCRAWETAMRRAPKDQPRPYQYVEKHGGMEILGPNARGRGTVSKGGPLAGPRP 208
            MAGGSS+G+ G       SSGA   XXXXXXXXXXXX + PSR     K+ARDIRRERNLASAKASRQRKRE ISALEQEH+R+NEVNA+LRARLNIS S  LP +Q+L RL A KPGH E+GPA+RKLAKK+ELESKVLVDLLDRAL+GG+G+GPPLDP+LCRAWE AMR+APKDQPRPY+YVEKHGGM++LGPNARGRGTVSKGGPLAGPRP
Sbjct:    1 MAGGSSSGKAGPSNGAGGSSGAPPPXXXXXXXXXXXXXSRPSRP----KSARDIRRERNLASAKASRQRKREGISALEQEHARINEVNALLRARLNISPSGPLPPVQELHRLAALKPGHHELGPAMRKLAKKNELESKVLVDLLDRALAGGRGRGPPLDPELCRAWEAAMRKAPKDQPRPYKYVEKHGGMDVLGPNARGRGTVSKGGPLAGPRP 210
The following BLAST results are available for this feature:
BLAST of Ggra4709.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4I74.400e-9477.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..88
NoneNo IPR availableGENE3D1.20.5.170coord: 45..106
e-value: 2.5E-6
score: 29.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..244
NoneNo IPR availableCDDcd14686bZIPcoord: 46..90
e-value: 1.19024E-7
score: 45.2289
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 46..94
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 41..105
e-value: 0.003
score: 25.4
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 44..90
e-value: 8.5E-8
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:28559..29293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4709.t1Ggra4709.t1Gracilaria gracilis GNS1m malemRNAtig00000065_pilon 28559..29293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4709.t1 ID=Ggra4709.t1|Name=Ggra4709.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MAGGSSNGRPGSSSGAGPSSGAGSSSGAPPSRAGPSRVNASKKTARDIRR
ERNLASAKASRQRKRESISALEQEHSRLNEVNAMLRARLNISDSDTLPAL
QQLQRLPAQKPGHTEVGPALRKLAKKSELESKVLVDLLDRALSGGQGKGP
PLDPDLCRAWETAMRRAPKDQPRPYQYVEKHGGMEILGPNARGRGTVSKG
GPLAGPRPPMPPGDGGRGSSSRAGSSKGGPSKAASSKGGPSSKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP