Ggra7019.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7019.t1
Unique NameGgra7019.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length402
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000062_piloncontigtig00000062_pilon:72060..73265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7019Ggra7019Gracilaria gracilis GNS1m malegenetig00000062_pilon 72060..73265 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7019.t1.stop1Ggra7019.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000062_pilon 72060..72062 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7019.t1.CDS1Ggra7019.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000062_pilon 72060..73265 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7019.t1.exon1Ggra7019.t1.exon1Gracilaria gracilis GNS1m maleexontig00000062_pilon 72060..73265 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7019.t1.start1Ggra7019.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000062_pilon 73263..73265 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7019.t1Ggra7019.t1Gracilaria gracilis GNS1m malepolypeptidetig00000062_pilon 72060..73265 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7019.t1 ID=Ggra7019.t1|Name=Ggra7019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=402bp
MEPFEAHKDLSLVPLQHMVVAVRNRRLLVRVDIDRPFDTADAFRSAPFAT
YMYQVAHVDAFIEGLPNVRFAFAIERTITSEEREIVGSMGHSVPSKGMKT
KPVSAPQLPRSNPYMSHPTTIPRPARPLVTQPKMLQVPQPVPAPPMQQTV
VPQRAPAYPPAAARPTQIIYQNPYQFTSTRPIHPQIVQKPSPRALHIGPQ
ITKPPPRIQSRSLLAHSMIPTAPSPPPQVDTGNKIVHPYMKLWEDHDLDD
PYEPIFITKDDRFDSKAKRSFIYEDTPPYASRVDHRKLFGLPGKGYPPFY
FDGPDISVGDGDPDRVISIERMQKQTGENSEETSSSLEDAPRPVEDGESK
YTTAVVAASNYNNSLRNERNDLRRWLIEDLAVDEESEEEDEDEDGDQDSS
E*
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spliced messenger RNA

>Ggra7019.t1 ID=Ggra7019.t1|Name=Ggra7019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1206bp|location=Sequence derived from alignment at tig00000062_pilon:72060..73265- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAACCATTTGAAGCTCATAAGGATCTCTCGTTGGTTCCGTTGCAGCA
TATGGTTGTTGCTGTACGCAACAGAAGACTTCTCGTTCGAGTCGACATAG
ACAGGCCTTTTGATACCGCCGATGCTTTTCGGTCTGCTCCGTTTGCCACT
TATATGTATCAGGTCGCCCATGTTGACGCCTTTATTGAAGGTCTACCAAA
CGTACGCTTCGCATTTGCCATAGAGAGAACCATTACAAGCGAGGAACGTG
AGATTGTGGGGAGCATGGGGCATTCCGTCCCATCAAAGGGGATGAAGACC
AAGCCCGTATCCGCTCCGCAACTACCGAGATCGAATCCGTACATGTCTCA
TCCGACAACAATACCAAGACCAGCTCGTCCGTTGGTAACACAACCGAAAA
TGTTGCAGGTGCCACAGCCAGTCCCTGCCCCGCCAATGCAACAAACTGTT
GTACCACAAAGGGCTCCGGCGTACCCTCCAGCTGCGGCGCGCCCTACGCA
GATTATATATCAGAACCCGTATCAGTTCACTTCCACTCGCCCCATTCACC
CACAAATTGTACAGAAGCCATCCCCTCGGGCGTTGCACATAGGCCCGCAA
ATAACAAAACCTCCCCCTCGGATTCAAAGCCGGAGTTTGTTGGCCCATTC
CATGATTCCTACCGCACCGAGTCCGCCTCCTCAGGTAGATACAGGGAACA
AGATAGTTCACCCATACATGAAGTTGTGGGAAGATCACGACCTAGACGAC
CCTTACGAGCCTATTTTCATTACTAAAGATGATCGCTTCGATTCCAAAGC
GAAAAGATCGTTCATATATGAAGATACGCCTCCGTACGCATCTCGGGTTG
ATCACCGCAAGCTCTTTGGACTACCCGGGAAAGGCTACCCCCCATTCTAT
TTCGATGGACCAGACATATCCGTTGGCGATGGTGACCCTGACAGAGTGAT
CTCAATCGAACGCATGCAAAAGCAAACGGGAGAGAATTCAGAGGAAACAT
CTAGTTCGTTAGAGGACGCACCTAGACCTGTGGAAGACGGAGAATCGAAA
TACACGACAGCGGTTGTGGCGGCGTCGAACTACAACAATAGTCTTCGAAA
TGAGAGAAATGATTTGCGAAGGTGGCTGATAGAAGACTTAGCTGTGGATG
AGGAAAGTGAGGAGGAAGACGAAGACGAAGATGGCGACCAAGACTCCTCA
GAGTGA
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protein sequence of Ggra7019.t1

>Ggra7019.t1 ID=Ggra7019.t1|Name=Ggra7019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=402bp
MEPFEAHKDLSLVPLQHMVVAVRNRRLLVRVDIDRPFDTADAFRSAPFAT
YMYQVAHVDAFIEGLPNVRFAFAIERTITSEEREIVGSMGHSVPSKGMKT
KPVSAPQLPRSNPYMSHPTTIPRPARPLVTQPKMLQVPQPVPAPPMQQTV
VPQRAPAYPPAAARPTQIIYQNPYQFTSTRPIHPQIVQKPSPRALHIGPQ
ITKPPPRIQSRSLLAHSMIPTAPSPPPQVDTGNKIVHPYMKLWEDHDLDD
PYEPIFITKDDRFDSKAKRSFIYEDTPPYASRVDHRKLFGLPGKGYPPFY
FDGPDISVGDGDPDRVISIERMQKQTGENSEETSSSLEDAPRPVEDGESK
YTTAVVAASNYNNSLRNERNDLRRWLIEDLAVDEESEEEDEDEDGDQDSS
E*
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mRNA from alignment at tig00000062_pilon:72060..73265-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7019.t1 ID=Ggra7019.t1|Name=Ggra7019.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1206bp|location=Sequence derived from alignment at tig00000062_pilon:72060..73265- (Gracilaria gracilis GNS1m male)
ATGGAACCATTTGAAGCTCATAAGGATCTCTCGTTGGTTCCGTTGCAGCA
TATGGTTGTTGCTGTACGCAACAGAAGACTTCTCGTTCGAGTCGACATAG
ACAGGCCTTTTGATACCGCCGATGCTTTTCGGTCTGCTCCGTTTGCCACT
TATATGTATCAGGTCGCCCATGTTGACGCCTTTATTGAAGGTCTACCAAA
CGTACGCTTCGCATTTGCCATAGAGAGAACCATTACAAGCGAGGAACGTG
AGATTGTGGGGAGCATGGGGCATTCCGTCCCATCAAAGGGGATGAAGACC
AAGCCCGTATCCGCTCCGCAACTACCGAGATCGAATCCGTACATGTCTCA
TCCGACAACAATACCAAGACCAGCTCGTCCGTTGGTAACACAACCGAAAA
TGTTGCAGGTGCCACAGCCAGTCCCTGCCCCGCCAATGCAACAAACTGTT
GTACCACAAAGGGCTCCGGCGTACCCTCCAGCTGCGGCGCGCCCTACGCA
GATTATATATCAGAACCCGTATCAGTTCACTTCCACTCGCCCCATTCACC
CACAAATTGTACAGAAGCCATCCCCTCGGGCGTTGCACATAGGCCCGCAA
ATAACAAAACCTCCCCCTCGGATTCAAAGCCGGAGTTTGTTGGCCCATTC
CATGATTCCTACCGCACCGAGTCCGCCTCCTCAGGTAGATACAGGGAACA
AGATAGTTCACCCATACATGAAGTTGTGGGAAGATCACGACCTAGACGAC
CCTTACGAGCCTATTTTCATTACTAAAGATGATCGCTTCGATTCCAAAGC
GAAAAGATCGTTCATATATGAAGATACGCCTCCGTACGCATCTCGGGTTG
ATCACCGCAAGCTCTTTGGACTACCCGGGAAAGGCTACCCCCCATTCTAT
TTCGATGGACCAGACATATCCGTTGGCGATGGTGACCCTGACAGAGTGAT
CTCAATCGAACGCATGCAAAAGCAAACGGGAGAGAATTCAGAGGAAACAT
CTAGTTCGTTAGAGGACGCACCTAGACCTGTGGAAGACGGAGAATCGAAA
TACACGACAGCGGTTGTGGCGGCGTCGAACTACAACAATAGTCTTCGAAA
TGAGAGAAATGATTTGCGAAGGTGGCTGATAGAAGACTTAGCTGTGGATG
AGGAAAGTGAGGAGGAAGACGAAGACGAAGATGGCGACCAAGACTCCTCA
GAGTGA
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Coding sequence (CDS) from alignment at tig00000062_pilon:72060..73265-

>Ggra7019.t1 ID=Ggra7019.t1|Name=Ggra7019.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1206bp|location=Sequence derived from alignment at tig00000062_pilon:72060..73265- (Gracilaria gracilis GNS1m male)
ATGGAACCATTTGAAGCTCATAAGGATCTCTCGTTGGTTCCGTTGCAGCA
TATGGTTGTTGCTGTACGCAACAGAAGACTTCTCGTTCGAGTCGACATAG
ACAGGCCTTTTGATACCGCCGATGCTTTTCGGTCTGCTCCGTTTGCCACT
TATATGTATCAGGTCGCCCATGTTGACGCCTTTATTGAAGGTCTACCAAA
CGTACGCTTCGCATTTGCCATAGAGAGAACCATTACAAGCGAGGAACGTG
AGATTGTGGGGAGCATGGGGCATTCCGTCCCATCAAAGGGGATGAAGACC
AAGCCCGTATCCGCTCCGCAACTACCGAGATCGAATCCGTACATGTCTCA
TCCGACAACAATACCAAGACCAGCTCGTCCGTTGGTAACACAACCGAAAA
TGTTGCAGGTGCCACAGCCAGTCCCTGCCCCGCCAATGCAACAAACTGTT
GTACCACAAAGGGCTCCGGCGTACCCTCCAGCTGCGGCGCGCCCTACGCA
GATTATATATCAGAACCCGTATCAGTTCACTTCCACTCGCCCCATTCACC
CACAAATTGTACAGAAGCCATCCCCTCGGGCGTTGCACATAGGCCCGCAA
ATAACAAAACCTCCCCCTCGGATTCAAAGCCGGAGTTTGTTGGCCCATTC
CATGATTCCTACCGCACCGAGTCCGCCTCCTCAGGTAGATACAGGGAACA
AGATAGTTCACCCATACATGAAGTTGTGGGAAGATCACGACCTAGACGAC
CCTTACGAGCCTATTTTCATTACTAAAGATGATCGCTTCGATTCCAAAGC
GAAAAGATCGTTCATATATGAAGATACGCCTCCGTACGCATCTCGGGTTG
ATCACCGCAAGCTCTTTGGACTACCCGGGAAAGGCTACCCCCCATTCTAT
TTCGATGGACCAGACATATCCGTTGGCGATGGTGACCCTGACAGAGTGAT
CTCAATCGAACGCATGCAAAAGCAAACGGGAGAGAATTCAGAGGAAACAT
CTAGTTCGTTAGAGGACGCACCTAGACCTGTGGAAGACGGAGAATCGAAA
TACACGACAGCGGTTGTGGCGGCGTCGAACTACAACAATAGTCTTCGAAA
TGAGAGAAATGATTTGCGAAGGTGGCTGATAGAAGACTTAGCTGTGGATG
AGGAAAGTGAGGAGGAAGACGAAGACGAAGATGGCGACCAAGACTCCTCA
GAGTGA
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